ID: uc003eqa.3_intron_5_0_chr3_133666290_r.3p
GENE: (8)
chr3:133666240-133666489-


(1)
AGO2.ip
(5)
B-CELL
(1)
BRAIN
(5)
BREAST
(10)
CELL-LINE
(31)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(1)
HELA
(1)
LIVER
(8)
OTHER
(33)
SKIN

Sense strand
CCTGTCTCAAGATATTTCTCTAGATGTGCCTGGCAAGCAGTAAATGCTCAATTAATGTCAGCTACTTCGATTACAATTTAACATACCAAATGTTCCTTCCTGAAGCCATGCTTCCTTCTCAGTGATCCAGCTCAGTGTTTGTAGCCCACATGCAGTCCCAGGCCTGTGCACCTGGATCACCTCCTTCTTTCCACTTATAGGTGCTGTGAACCTCCCTGCTGCAGCCTTGGGGATGCTGTTTGGAGGAATC
.................................................................................................................................((.(((.(((((..((.........))..)))))))).))...((((.............)))).........................................................
..............................................................................................................................127...............................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR343334SRR343337SRR343336SRR343335SRR040018(GSM532903)
G701N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR189785SRR040032(GSM532917)
G603N. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR040006(GSM532891)
G601N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR189784SRR040026(GSM532911)
G220N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189783SRR040016(GSM532901)
G645N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM532883(GSM532883)
G871N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
GSM532890(GSM532890)
G576T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR029124(GSM416753)
HeLa. (hela)
SRR040030(GSM532915)
G013N. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040021(GSM532906)
G761T_2. (cervix)
GSM532871(GSM532871)
G652N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR040023(GSM532908)
G575T. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
SRR038860(GSM458543)
MM426. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532887(GSM532887)
G761N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
TAX577745(Rovira)
total RNA. (breast)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
GSM532872(GSM532872)
G652T. (cervix)
...........................................................................................................................................................................CTGGATCACCTCCTTTCT.............................................................18562.000.00191.0038.0035.0034.0033.0028.0011.009.005.009.009.007.005.005.004.003.004.004.004.004.003.004.004.004.001.003.003.003.003.003.003.002.003.003.003.003.003.002.002.002.002.002.002.002.001.002.002.002.002.002.001.002.002.001.002.002.001.001.001.001.001.001.001.001.001.001.001.00-1.001.001.00-1.001.001.001.001.00-1.00-1.001.001.001.00-1.001.001.001.001.001.00-1.00-1.00-1.001.00
...........................................................................................................................................................................CTGGATCACCTCCTTTCTA............................................................1919.000.008.001.001.002.001.001.00--1.00-----------------------------------1.00----------------------------------1.00----1.00------1.00------
...........................................................................................................................................................................CTGGATCACCTCCTTTCTT............................................................194.000.004.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................................CTGGATCACCTCCTTTCA.............................................................184.000.00-1.00---1.001.001.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................CCTGGATCACCTCCTTTCT.............................................................194.000.00--1.001.00----1.00--------------------------------------------------------------------1.00--------------------
...........................................................................................................................................................................CTGGATCACCTCCTTTTT.............................................................183.000.002.00---1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................CTGGATCACCTCCTTTCTG............................................................193.000.00--2.00---------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................CTGGATCACCTCCTTTAT.............................................................183.000.001.00-------------------1.00----------1.00------------------------------------------------------------------
...........................................................................................................................................................................CTGGATCACCTCCTTCT..............................................................1711.001.00---------------------------------------------------------------------------------------------1.00----
...........................................................................................................................................................................CTGGATCACCTCCTTTCG.............................................................181.000.00-----------------------------------------------------1.00--------------------------------------------
................................................................................................................................................................................................................................CCTTGGGGATGCTGTTTGGA......2011.001.00-----------------------------------------------------------------------1.00--------------------------
...................................................................................................................................TCAGTGTTTGTAGCCTC......................................................................................................171.000.00---------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................TGCTGCAGCCTTGGGGATGC..............2011.001.00------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................CTGGATCACCTCCTTAA..............................................................171.000.00--------------------------------------------------1.00-----------------------------------------------
............................................................................................................................................................................TGGATCACCTCCTTCCT.............................................................171.000.00--------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................CTGGATCACCTCCTTC...............................................................1640.500.50--------------0.25-----------------------------------------0.25-----------------------------------------

Antisense strand
CCTGTCTCAAGATATTTCTCTAGATGTGCCTGGCAAGCAGTAAATGCTCAATTAATGTCAGCTACTTCGATTACAATTTAACATACCAAATGTTCCTTCCTGAAGCCATGCTTCCTTCTCAGTGATCCAGCTCAGTGTTTGTAGCCCACATGCAGTCCCAGGCCTGTGCACCTGGATCACCTCCTTCTTTCCACTTATAGGTGCTGTGAACCTCCCTGCTGCAGCCTTGGGGATGCTGTTTGGAGGAATC
.................................................................................................................................((.(((.(((((..((.........))..)))))))).))...((((.............)))).........................................................
..............................................................................................................................127...............................................................193.......................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR343334SRR343337SRR343336SRR343335SRR040018(GSM532903)
G701N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR189785SRR040032(GSM532917)
G603N. (cervix)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM532885(GSM532885)
G850N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR040006(GSM532891)
G601N. (cervix)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029130(GSM416759)
DLD2. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR189784SRR040026(GSM532911)
G220N. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189783SRR040016(GSM532901)
G645N. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM532883(GSM532883)
G871N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
GSM532890(GSM532890)
G576T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR029124(GSM416753)
HeLa. (hela)
SRR040030(GSM532915)
G013N. (cervix)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR040021(GSM532906)
G761T_2. (cervix)
GSM532871(GSM532871)
G652N. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR040023(GSM532908)
G575T. (cervix)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR040008(GSM532893)
G727N. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
SRR038860(GSM458543)
MM426. (cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532887(GSM532887)
G761N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
TAX577745(Rovira)
total RNA. (breast)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
GSM532872(GSM532872)
G652T. (cervix)
................................................................................................................TCCTTCTCAGTGATCGGC........................................................................................................................ 181.000.00------------------------1.00-------------------------------------------------------------------------
.............................CTGGCAAGCAGTAAATAG........................................................................................................................................................................................................... 181.000.00--------1.00-----------------------------------------------------------------------------------------
..............................................................................TAACATACCAAATGTGTA.......................................................................................................................................................... 181.000.00-------------------------------------------------------------------1.00------------------------------
...................................................................................................................................................................................................TATAGGTGCTGTGAAC....................................... 161.000.00-----------------------------------------------------------------------------------------------1.00--