ID: uc003eom.2_intron_18_0_chr3_132003015_r.3p
GENE: (1)
chr3:132002965-132003214-


(1)
B-CELL
(1)
BREAST
(3)
CELL-LINE
(1)
CERVIX
(3)
HEART
(3)
LIVER
(6)
OTHER
(8)
SKIN
(1)
TESTES

Sense strand
ACAATAGCCAAGGTAGTTAGAGTCCTGAGATGTTTGGTTCCCTATAGAAACTAAAGACAACATCTCAACATATGTCCCTGAGCTACTTTTCAGAAACACAGACCCCAGCCAAATGGATCCACTGGCATGTAGACCTCAGATAAGGGGCGATTGAGAACTGAACTCTGACTGCCGTTCTTTTTTCTAAACTTCTTCCTTAGGAGCCTAAAGGACGTCATACCCATGGGCCAGACCTAACATTCCTTTCTGC
.........................................................................................(((((....(((......((((..((....)).)))).......((((......))))..........)))...)))))..................................................................................
...............................................................................80...........................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR343336SRR343337SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................................................................................TTGAGAACTGAACTCCATG.................................................................................1921.000.004.007.003.004.002.001.00---------------------
.......................................................................................................................................................TGAGAACTGAACTCTATG.................................................................................1814.000.003.002.004.002.003.00----------------------
.......................................................................................................................................................TGAGAACTGAACTCTATAG................................................................................1914.000.0011.001.00---2.00---------------------
........................................................................................................................................CAGATAAGGGGCGATTGAGAACTG..........................................................................................2411.001.00----------------1.00----------
.......................................................................................................................................................TGAGAACTGAACTCTATCG................................................................................191.000.001.00--------------------------
....................................................................................ACTTTTCAGAAACACAGAGC..................................................................................................................................................201.000.00------------------1.00--------
...................................................................................................................................................................TCTGACTGCCGTTCTT.......................................................................1631.001.00--------------------0.67-----0.33
.....................................................................................................................................................ATTGAGAACTGAACTCTG...................................................................................1811.001.00--------------1.00------------
.......................................................................................................................................................TGAGAACTGAACTCTAT..................................................................................171.000.00-1.00-------------------------
................................................................................................................................................................................CTTTTTTCTAAACTTTCC........................................................181.000.00-----------------1.00---------
.....................................................................................................................TCCACTGGCATGTAGACCTCTG...............................................................................................................221.000.00-----------1.00---------------
................................................................................................................................................GGGCGATTGAGAACTG..........................................................................................1611.001.00---------1.00-----------------
.......................................................................................................................................................TGAGAACTGAACTCTAAAG................................................................................191.000.001.00--------------------------
........................CTGAGATGTTTGGTTAAG................................................................................................................................................................................................................181.000.00-------------1.00-------------
......................................................................................................................................................TTGAGAACTGAACTCTG...................................................................................1720.500.50-----------------------0.50---

Antisense strand
ACAATAGCCAAGGTAGTTAGAGTCCTGAGATGTTTGGTTCCCTATAGAAACTAAAGACAACATCTCAACATATGTCCCTGAGCTACTTTTCAGAAACACAGACCCCAGCCAAATGGATCCACTGGCATGTAGACCTCAGATAAGGGGCGATTGAGAACTGAACTCTGACTGCCGTTCTTTTTTCTAAACTTCTTCCTTAGGAGCCTAAAGGACGTCATACCCATGGGCCAGACCTAACATTCCTTTCTGC
.........................................................................................(((((....(((......((((..((....)).)))).......((((......))))..........)))...)))))..................................................................................
...............................................................................80...........................................................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343334SRR343335SRR343336SRR343337SRR189785SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................AACATCTCAACATATGTTGA............................................................................................................................................................................ 202.000.00------2.00--------------------
............................................................................CCTGAGCTACTTTTCAGAATGC........................................................................................................................................................ 221.000.00--------1.00------------------
............................................................................GTTTCTGAAAAGTAGCTCAGG......................................................................................................................................................... 2121.001.00-------0.50----------------0.50--
..............AGTTAGAGTCCTGAGACTG......................................................................................................................................................................................................................... 191.000.00---------------1.00-----------
.............................................................................................................................................................................................TTCTTCCTTAGGAGCCATTG......................................... 201.000.00----------1.00----------------
.............................................................................................................................................................................AGGAAGAAGTTTAGAAAAAAGAAC..................................................... 2411.001.00-------------------1.00-------
..................................................................................................................................................................AAAAGAACGGCAGTCAGAG..................................................................... 1911.001.00------------1.00--------------
...........................................................................TGAAAAGTAGCTCAGGG.............................................................................................................................................................. 1720.500.50-------0.50-------------------
..........................................................................................................................................................................................................................AGGTCTGGCCCATGGGT............... 1720.500.50---------------------0.50-----
...........................................................................TCTGAAAAGTAGCTCAGGG............................................................................................................................................................ 1920.500.50-------------------------0.50-
...........................................................................CTGAAAAGTAGCTCAGGG............................................................................................................................................................. 1820.500.50----------------------0.50----
.............................................................................TCTGAAAAGTAGCTCAG............................................................................................................................................................ 1730.330.33-------0.33-------------------