ID: uc003emz.3_intron_5_0_chr3_129599403_r.5p
GENE: (1)
chr3:129612137-129612386-


(1)
AGO2.ip 		(10)
B-CELL 		(4)
BRAIN 		(11)
BREAST 		(23)
CELL-LINE 		(13)
CERVIX 		(5)
HEART 		(4)
HELA 		(1)
LIVER 		(2)
OTHER 		(17)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TCGAGCGACGGCGCTGGCGGAGACGCCGGCTGCTCCTCCCCTCCCCGCCGGTGAGTGAGCGCCCCCGCCCCGGACGCTGGCGGCGGTCGCGGCCCCCTCACGGCCCTCCGCGGTGGGTGGGGACAGTCGTGAGGGAGCGTGGCCTGGCGGCGCAGCGGACGCGGGCCTGGCCTCCCGCTCGCGGCCTGTCGGGGCTGGGACCTGCCGTCGCCCCCGTTCGAGGTTGAAGCCCCGGGCCTAGGACTCGACC
........................................................................................................................................................((((...((((((((((((.....)).)).)))))).))..)))).....................................................
...................................................................................................................................................148.................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040015(GSM532900)
G623T. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR189783SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR343337SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR040029(GSM532914)
G026T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040043(GSM532928)
G428T. (cervix)		GSM532886(GSM532886)
G850T. (cervix)		TAX577743(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
.......ACGGCGCTGGCGGAGCGC.................................................................................................................................................................................................................................18456.000.7533.5017.50-----1.50----------0.50-0.500.25-0.250.25------------------------------------------------------0.250.25-0.25---0.250.250.25-0.25----
.......ACGGCGCTGGCGGAGCGG.................................................................................................................................................................................................................................18411.250.754.257.00---------------------------------------------------------------------------------------------
........................................................................................................................................................CAGCGGACGCGGGCCTGG................................................................................1818.008.00----2.001.004.00-----------------------------------------------------------------1.00----------------------
.......ACGGCGCTGGCGGAGAGC.................................................................................................................................................................................................................................186.000.005.001.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................AGCGGACGCGGGCCTGGC...............................................................................1816.006.00--4.00--2.00-----------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCG..................................................................................................................................................................................................................................1745.750.753.501.50---------------------------------------------------------------------------0.25------0.25-------0.25--
...............................................................................................................................CGTGAGGGAGCGTGGCCTGG.......................................................................................................2015.005.00---3.001.00----------------------------------------------------------1.00-------------------------------
.......ACGGCGCTGGCGGAGGGC.................................................................................................................................................................................................................................1844.000.751.751.75----------------0.25------------------------------------------------------------------------0.25---
.......ACGGCGCTGGCGGAGAGG.................................................................................................................................................................................................................................184.000.002.002.00---------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGAGA.................................................................................................................................................................................................................................183.000.001.001.00----------------1.00----------------------------------------------------------------------------
.............................................................................................................................................GCCTGGCGGCGCAGCGGACG.........................................................................................2013.003.00----------------2.00-------------1.00----------------------------------------------------------------
...........................................................................................................................................................CGGACGCGGGCCTGGCCT.............................................................................1813.003.00--3.00--------------------------------------------------------------------------------------------
........................................................................................................................................................CAGCGGACGCGGGCCTGGCC..............................................................................2013.003.00----2.00----------1.00-------------------------------------------------------------------------------
........CGGCGCTGGCGGAGAGC.................................................................................................................................................................................................................................173.000.001.001.001.00--------------------------------------------------------------------------------------------
..........................................................................................................................................GTGGCCTGGCGGCGCAGCGG............................................................................................2013.003.00--3.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................CGGACGCGGGCCTGGCCTC............................................................................1912.002.00--2.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................AGCGGACGCGGGCCTGGCCTCCCGTT.......................................................................262.000.00----------2.00------------------------------------------------------------------------------------
......................................CCCTCCCCGCCGGTGA....................................................................................................................................................................................................1612.002.002.00----------------------------------------------------------------------------------------------
............................................................................................CCCCCTCACGGCCCTCCCCC..........................................................................................................................................202.000.00--------------------------------1.00-------------------------------1.00------------------------------
...................................................................................................................................................CGGCGCAGCGGACGCGGGCCTGGC...............................................................................2412.002.00-----1.00------------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................TCGCGGCCTGTCGGGGCTGGGAC.................................................2312.002.00---------------------------1.00------------------------------1.00------------------------------------
........................................................................................................................................................................................CCTGTCGGGGCTGGGACCTCTG............................................222.000.00-----------------------------------------------------------1.00--------1.00--------------------------
.......ACGGCGCTGGCGGAGTGC.................................................................................................................................................................................................................................1842.000.751.500.50---------------------------------------------------------------------------------------------
....................................................................................................................................................GGCGCAGCGGACGCGGGCCTGGC...............................................................................2312.002.00---------2.00-------------------------------------------------------------------------------------
..........................................................................................................................................GTGGCCTGGCGGCGCAGCGGAC..........................................................................................2212.002.00--------------2.00--------------------------------------------------------------------------------
.........................................................................................................................................................AGCGGACGCGGGCCTGGCC..............................................................................1912.002.00--2.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CGTTCGAGGTTGAAGCC...................1712.002.00--2.00--------------------------------------------------------------------------------------------
...................................................................................................................................AGGGAGCGTGGCCTGGCGGCG..................................................................................................2112.002.00---1.00-----------1.00-------------------------------------------------------------------------------
.............................................................................................CCCCTCACGGCCCTCCCCCG.........................................................................................................................................202.000.00---------------------------------1.00----------1.00--------------------------------------------------
.......ACGGCGCTGGCGGAGCGA.................................................................................................................................................................................................................................1841.250.750.500.25------0.25---------------------------------------------------------------------0.25----------------
.......ACGGCGCTGGCGGAGCGCT................................................................................................................................................................................................................................1941.250.75-------0.25-------------0.250.25----------------------------------------------------0.25-------------0.25-----
..............................................................................GGCGGCGGTCGCGGCCG...........................................................................................................................................................171.000.00--------------------------1.00--------------------------------------------------------------------
..........................................................................................................................................GTGGCCTGGCGGCGCAGCGGA...........................................................................................2111.001.00-----------------------------------1.00-----------------------------------------------------------
..................................................................................................................................GAGGGAGCGTGGCCTGGCGGCG..................................................................................................2211.001.00---1.00-------------------------------------------------------------------------------------------
..................................................................................................................................GAGGGAGCGTGGCCTGGCG.....................................................................................................1911.001.00-----------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................GGCGCAGCGGACGCGGGCCTGG................................................................................2211.001.00---1.00-------------------------------------------------------------------------------------------
....................................................................................................................................GGGAGCGTGGCCTGGCGGCG..................................................................................................2011.001.00---1.00-------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGAGCT................................................................................................................................................................................................................................191.000.001.00----------------------------------------------------------------------------------------------
...................................................................................................................................AGGGAGCGTGGCCTGGCGGAGCA................................................................................................231.000.00--------1.00--------------------------------------------------------------------------------------
...................................................................................CGGTCGCGGCCCCCTCACGGCAA................................................................................................................................................231.000.00----------------------------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................GAAGCCCCGGGCCTAGGACT.....2011.001.00----1.00------------------------------------------------------------------------------------------
........................GCCGGCTGCTCCTCCCCCACC.............................................................................................................................................................................................................211.000.00---------------------------------------------------------------------1.00-------------------------
.......................................................................................................................................................................................GCCTGTCGGGGCTGGGACC................................................1911.001.00--------------------------------------------------------------1.00--------------------------------
........................................................................................................................GGACAGTCGTGAGGGAGCGT..............................................................................................................2011.001.00-----------------------------------------------------1.00-----------------------------------------
..........................................................GCGCCCCCGCCCCGGTGA..............................................................................................................................................................................1801.001.00-------------------------------------------1.00---------------------------------------------------
............................................................................................CCCCCTCACGGCCCTCCCC...........................................................................................................................................191.000.00---------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................GCCTGGCGGCGCAGCGGACGCG.......................................................................................2211.001.00--------------------------------------1.00--------------------------------------------------------
.......ACGGCGCTGGCGGAGTGG.................................................................................................................................................................................................................................1841.000.750.500.50---------------------------------------------------------------------------------------------
...........................................................................................................................................TGGCCTGGCGGCGCAGCGGACGCGGGCCTGGCCTCCCGCTCGCGGCCTGTCGGGGCTGGGACCTGCCG...........................................6811.001.00-------------------------------------------------------------------1.00---------------------------
.................CGGAGACGCCGGCTGTCTA......................................................................................................................................................................................................................191.000.00-------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................TGGCCTGGCGGCGCAGCG.............................................................................................1811.001.00----------------------------1.00------------------------------------------------------------------
..............................................................................................................................................................................................GGGGCTGGGACCTGCCG...........................................1711.001.00------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................GGCGCAGCGGACGCGGGC....................................................................................1811.001.00-----1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................CGGCGCAGCGGACGCGGGCCTGG................................................................................2311.001.00------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................................GCAGCGGACGCGGGCCTGG................................................................................1911.001.00-------------------------------------------------1.00---------------------------------------------
.......ACGGCGCTGGCGGAGACGC................................................................................................................................................................................................................................1911.001.00-------------------1.00---------------------------------------------------------------------------
...................................................................................................................................................CGGCGCAGCGGACGCGGGCCTGGCC..............................................................................2511.001.00-------------------------------1.00---------------------------------------------------------------
................................................................................................................................GTGAGGGAGCGTGGCCTGG.......................................................................................................1911.001.00------------------------------------1.00----------------------------------------------------------
.......................................................................................................................GGGACAGTCGTGAGGGAG.................................................................................................................1811.001.00---1.00-------------------------------------------------------------------------------------------
......................................................................................................................................................CGCAGCGGACGCGGGCCTGGCC..............................................................................2211.001.00-----------------------------------------------------------------------1.00-----------------------
..........................................................................................................................................GTGGCCTGGCGGCGCAGGA.............................................................................................191.000.00-----------1.00-----------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGAG..................................................................................................................................................................................................................................171.000.001.00----------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCTC.................................................................................................................................................................................................................................1841.000.751.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GCCTGTCGGGGCTGGGAC.................................................1811.001.00---------------------------------------------1.00-------------------------------------------------
..........................................................GCGCCCCCGCCCCGGTGAC.............................................................................................................................................................................1901.001.001.00----------------------------------------------------------------------------------------------
...................................CTCCCCTCCCCGCCGGTGAG...................................................................................................................................................................................................2011.001.00-----------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................GCCTGGCGGCGCAGCGGA...........................................................................................1811.001.00---1.00-------------------------------------------------------------------------------------------
........................................................................................................................GGACAGTCGTGAGGGAGCGTGG............................................................................................................2211.001.00----------------------------------------------1.00------------------------------------------------
......................................................................................................................................................CGCAGCGGACGCGGGCCTGGC...............................................................................2111.001.00--------------------------------------------------------1.00--------------------------------------
.......ACGGCGCTGGCGGAGCGCA................................................................................................................................................................................................................................1941.000.75-0.25-----0.75---------------------------------------------------------------------------------------
........CGGCGCTGGCGGAGAGG.................................................................................................................................................................................................................................171.000.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................CGCAGCGGACGCGGGCCTGGCCTCC...........................................................................2511.001.00----------------------------------------------------1.00------------------------------------------
...AGCGACGGCGCTGGCGGA.....................................................................................................................................................................................................................................1811.001.00-------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................CGGACGCGGGCCTGGCCTCCC..........................................................................2111.001.00------------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................CCGCTCGCGGCCTGTCTT..........................................................181.000.00----------------------------------------1.00------------------------------------------------------
..........................................................................................................................................................GCGGACGCGGGCCTGGCCTCCCGCTCGC....................................................................2811.001.00-------------------------------------------------------------1.00---------------------------------
.................................................................................................................................TGAGGGAGCGTGGCCTGG.......................................................................................................1811.001.00----------------------------------------------------------------------1.00------------------------
....................................................................................................................................................................................GCGGCCTGTCGGGGCTGGGAC.................................................2111.001.00-----------------------1.00-----------------------------------------------------------------------
..............................................GCCGGTGAGTGAGCGCTG..........................................................................................................................................................................................181.000.00-----------------------------------------------------------------1.00-----------------------------
............................................................................................................................AGTCGTGAGGGAGCGTGG............................................................................................................1811.001.00-----------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................CGCAGCGGACGCGGGCCTGG................................................................................2011.001.00---1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................GTGGCCTGGCGGCGCAGCGGACGCG.......................................................................................2511.001.00-----------1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCCCGTTCGAGGTTGAAGCCC..................2111.001.00------------1.00----------------------------------------------------------------------------------
..........................................................GCGCCCCCGCCCCGG.................................................................................................................................................................................1501.001.00------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................GCGCAGCGGACGCGGGCCTGG................................................................................2111.001.00-------------------------------------1.00---------------------------------------------------------
............................................................................................CCCCCTCACGGCCCTCCC............................................................................................................................................181.000.00------------------------------------------------------1.00----------------------------------------
........................................................................................................................................................................................................CCTGCCGTCGCCCCCGTTCGAGGTT.........................2511.001.00--------------------------------------------------1.00--------------------------------------------
...................................................................................................................................AGGGAGCGTGGCCTGGCGGCGCA................................................................................................2311.001.00--------1.00--------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAG....................................................................................................................................................................................................................................1540.750.75-0.25-----------------0.50---------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGTTC.................................................................................................................................................................................................................................1840.750.750.500.25---------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGT...................................................................................................................................................................................................................................1640.750.75-0.25-------------------------------------------------------------------------------0.25---0.25---------
.......ACGGCGCTGGCGGAGCAC.................................................................................................................................................................................................................................1840.750.750.500.25---------------------------------------------------------------------------------------------
.........................................................AGCGCCCCCGCCCCGGCGA..............................................................................................................................................................................1940.750.25--------------------0.75--------------------------------------------------------------------------
...........................................................................................................................................................................................GTCGGGGCTGGGACCTG..............................................1720.500.50--------------------------------------------------------------------------0.50--------------------
...................................................................................................................................................CGGCGCAGCGGACGCGGG.....................................................................................1820.500.50---0.50-------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCGT.................................................................................................................................................................................................................................1840.500.750.50----------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCGAT................................................................................................................................................................................................................................1940.500.75---------------------0.25-----------------------------------------------------------------------0.25-
............................................................................................CCCCCTCACGGCCCTC..............................................................................................................................................1630.330.33----------------------------------------------------------------------------0.33------------------
..........................................................................................................................................GTGGCCTGGCGGCGC.................................................................................................1530.330.33-------------------------------------------------------------------------0.33---------------------
..........................................................................................................................................GTGGCCTGGCGGCGCTC...............................................................................................1730.330.33-------------------------------------------------------------------------0.33---------------------
.......ACGGCGCTGGCGGAGTGT.................................................................................................................................................................................................................................1840.250.75-0.25---------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCCGG................................................................................................................................................................................................................................1940.250.750.25----------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCCA.................................................................................................................................................................................................................................1840.250.750.25----------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCGAC................................................................................................................................................................................................................................1940.250.75---------------------0.25-------------------------------------------------------------------------
.........................................................AGCGCCCCCGCCCCGGCG...............................................................................................................................................................................1840.250.25-----------------------------------------------------------------------------------0.25-----------
.......ACGGCGCTGGCGGAGTG..................................................................................................................................................................................................................................1740.250.750.25----------------------------------------------------------------------------------------------
.......ACGGCGCTGGCGGAGCT..................................................................................................................................................................................................................................1740.250.75---------------------------------------------------------------------------0.25-------------------
.......ACGGCGCTGGCGGAGCGCG................................................................................................................................................................................................................................1940.250.75---------------------0.25-------------------------------------------------------------------------
.........................................................AGCGCCCCCGCCCCGG.................................................................................................................................................................................1640.250.25-------------------------0.25---------------------------------------------------------------------
.......ACGGCGCTGGCGGAGGTG.................................................................................................................................................................................................................................1840.250.750.25----------------------------------------------------------------------------------------------
..........................................................GCGCCCCCGCCCCGGA................................................................................................................................................................................1650.200.20----------------------------------------------------------------------------------------------0.20

Antisense strand
TCGAGCGACGGCGCTGGCGGAGACGCCGGCTGCTCCTCCCCTCCCCGCCGGTGAGTGAGCGCCCCCGCCCCGGACGCTGGCGGCGGTCGCGGCCCCCTCACGGCCCTCCGCGGTGGGTGGGGACAGTCGTGAGGGAGCGTGGCCTGGCGGCGCAGCGGACGCGGGCCTGGCCTCCCGCTCGCGGCCTGTCGGGGCTGGGACCTGCCGTCGCCCCCGTTCGAGGTTGAAGCCCCGGGCCTAGGACTCGACC
........................................................................................................................................................((((...((((((((((((.....)).)).)))))).))..)))).....................................................
...................................................................................................................................................148.................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR037936(GSM510474)
293cand1. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040015(GSM532900)
G623T. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR040030(GSM532915)
G013N. (cervix)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)		SRR189783SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR189785SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR040032(GSM532917)
G603N. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR343337SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR040029(GSM532914)
G026T. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040043(GSM532928)
G428T. (cervix)		GSM532886(GSM532886)
G850T. (cervix)		TAX577743(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
...............................................................................................................................................................................................GGGCTGGGACCTGCCGGGTT....................................... 201.000.00-----------------------------------------------1.00-----------------------------------------------
..............................................CGGGGGCGCTCACTCACCGGC....................................................................................................................................................................................... 2111.001.00------1.00----------------------------------------------------------------------------------------
......................................................................................................................ACGCTCCCTCACGACTGTCCCC.............................................................................................................. 2211.001.00---------------------------------------1.00-------------------------------------------------------
....................................................................................................................................................................GCCTGGCCTCCCGCTGGCG................................................................... 191.000.00----------------------1.00------------------------------------------------------------------------
...................................CGGCGGGGAGGGGAG........................................................................................................................................................................................................ 1501.001.00------------------------------------------------1.00----------------------------------------------
........................................................................................................................................................................................................CGAACGGGGGCGACGGCAGG.............................. 2011.001.00----1.00------------------------------------------------------------------------------------------
...................................CTCCCCTCCCCGCCGTATC.................................................................................................................................................................................................... 191.000.00-----------------------------1.00-----------------------------------------------------------------
....................................TCCCCTCCCCGCCGGAGG.................................................................................................................................................................................................... 181.000.00---------------------------------------------------1.00-------------------------------------------
.................................................................................................................................................................................................................ACCTCGAACGGGGGC.......................... 1511.001.00-----1.00-----------------------------------------------------------------------------------------
..............................................................................GGCGGCGGTCGCGGCTGG.......................................................................................................................................................... 181.000.00-------------1.00---------------------------------------------------------------------------------
............................................................................CTGGCGGCGGTCGCGAAG............................................................................................................................................................ 181.000.00-------------------------------------------------------1.00---------------------------------------