ID: uc003eae.1_intron_9_0_chr3_113119492_r.3p
GENE: (11)
chr3:113119442-113119691-


(2)
BREAST
(3)
CELL-LINE
(1)
HEART
(1)
OTHER
(1)
SKIN

Sense strand
CCATTAAGGACAAAGCCCAGGACTCTATCTGGTTCTCCTAATTCTGAACCAGTGTTCTTTCTAACTTTTTAGGCTTTTTCTTATTTCTATCCAAATAAAATCACATGTGTTATATTTTTATCTTTGCATTTTTTTAAACTTGATCTTAATTCTTTGTTACTCTGTCTTTGAGATCTAGTAAGCTGTCTATCTATTCTCAGACCCAGGACCCAGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGC
...........................................................(((((....)))))......................(((((....(((((..(((....)))...)))))..)))))..................................................................................................................
..........................................................59...........................................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343334SRR189784SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR343335SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343336SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.................................................................................................................ATTTTTATCTTTGCATAAG......................................................................................................................1951.000.0023.0016.00--8.004.00-------
.................................................................................................................ATTTTTATCTTTGCATATG......................................................................................................................1918.000.0012.003.00--2.00-----1.00--
.....................................CTAATTCTGAACCAGTAGC..................................................................................................................................................................................................1910.000.00--3.006.00----1.00----
................................................................................................................TATTTTTATCTTTGCACAAC......................................................................................................................209.000.001.008.00-----------
.....................................CTAATTCTGAACCAGTAGCT.................................................................................................................................................................................................207.000.00--2.004.00---1.00-----
.....................................CTAATTCTGAACCAGTA....................................................................................................................................................................................................173.000.00--2.00----1.00-----
..................................CTCCTAATTCTGAACTCTG.....................................................................................................................................................................................................192.000.00---------2.00---
.....................................CTAATTCTGAACCAGTAG...................................................................................................................................................................................................182.000.00---2.00---------
.....................................CTAATTCTGAACCAGTACC..................................................................................................................................................................................................191.000.00--------1.00----
...TTAAGGACAAAGCCCAGGACTCT................................................................................................................................................................................................................................2311.001.00-----------1.00-
..............................................................................................................................CATTTTTTTAAACTTGAATA........................................................................................................201.000.00-1.00-----------
..........................................................................................................................TTTGCATTTTTTTAAACTTCC...........................................................................................................211.000.00------------1.00
..................................................................................................................TTTTTATCTTTGCATATG......................................................................................................................181.000.001.00------------
.................................................................................................................ATTTTTATCTTTGCATGAT......................................................................................................................191.000.00-1.00-----------
.................................................................................................................ATTTTTATCTTTGCATAAGA.....................................................................................................................201.000.00----1.00--------
.................................................................................................................ATTTTTATCTTTGCATAAA......................................................................................................................191.000.001.00------------
.................................................................................................................ATTTTTATCTTTGCATAAT......................................................................................................................191.000.00-----1.00-------
...............................................................ACTTTTTAGGCTTTTGTC.........................................................................................................................................................................181.000.00------1.00------

Antisense strand
CCATTAAGGACAAAGCCCAGGACTCTATCTGGTTCTCCTAATTCTGAACCAGTGTTCTTTCTAACTTTTTAGGCTTTTTCTTATTTCTATCCAAATAAAATCACATGTGTTATATTTTTATCTTTGCATTTTTTTAAACTTGATCTTAATTCTTTGTTACTCTGTCTTTGAGATCTAGTAAGCTGTCTATCTATTCTCAGACCCAGGACCCAGAATGCCTCTTCTCCTTCCATTCTGGAGCTATTGAAGC
...........................................................(((((....)))))......................(((((....(((((..(((....)))...)))))..)))))..................................................................................................................
..........................................................59...........................................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR343334SRR189784SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR343335SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343336SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................CTAATTCTGAACCAGTCT................................................................................................................................................................................................... 1819.000.00--19.00----------
............................................................................................................................................................................................................AGGACCCAGAATGCCTCTCAGG........................ 221.000.00------1.00------
................................................................CTTTTTAGGCTTTTTCTCG....................................................................................................................................................................... 191.000.00------1.00------
.....................................CTAATTCTGAACCAGCTA................................................................................................................................................................................................... 181.000.00-------1.00-----
.....................................CTAATTCTGAACCAGCT.................................................................................................................................................................................................... 171.000.00--1.00----------