ID: uc003dxq.3_intron_5_0_chr3_109052841_r.5p
GENE: (1)
chr3:109056111-109056360-


(1)
AGO2.ip 		(2)
BREAST 		(8)
CELL-LINE 		(1)
HEART 		(1)
OTHER 		(4)
SKIN 		(1)
TESTES

Sense strand
TGCGAGGCTCCGCTTCTTCTACAAGTATGGAGAAGGCAAAAGGCAAGGAGGTCAGTACAGTTTTAGTGGATTTGTTTTCTGTCTGTCTTTGTGTTTCTGTCTTCCCTGGGCACTCCTGATTTTTCCTTTAAGGAGAAAAGAATGTGCCTTCGAATTTTCTCCTCTTGACTTTTTTTTTTTTTATTTTAAGAGTAAGGCCCAAGAATATGATTGCAGCCTGGTATATTGGAGTGAGCAGACAAGTAAGAAA
.....................................................................................................................................((((((...((......))..)))))).(((((((.................)))))))..........................................................
.....................................................................................................................................134.........................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189782SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTAAG............................................................23110.0010.007.003.00------------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTAAT............................................................235.000.003.001.001.00-----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTATATG..........................................................254.000.002.001.001.00-----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTATAG............................................................233.000.001.001.00-1.00----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTAAG.............................................................223.000.00--2.001.00----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTAG..............................................................213.000.001.001.00-1.00----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTCAT..............................................................212.000.00-2.00------------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTATAG...........................................................232.000.001.001.00------------------
.........................................................................................................................................................................TTTTTTTTTTTTTATTTTATTCT..........................................................232.000.00--1.001.00----------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTCGG.............................................................212.000.00----2.00---------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTCG.............................................................222.000.00-1.00--1.00---------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTATAT............................................................232.000.001.00----1.00--------------
..........................................................................................................................................AGAATGTGCCTTCGAAC...............................................................................................172.000.00--------2.00-----------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATCCG...............................................................202.000.001.001.00------------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTCTTG.............................................................222.000.00-1.00-1.00----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTAAAG............................................................232.000.00--2.00-----------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTAATG............................................................221.000.00-1.00------------------
...........................................................................................................................................................................TTTTTTTTTTTATTTTAAGATTAT.......................................................241.000.00-----1.00--------------
....................................................................................................................................................................TTGACTTTTTTTTTTTTTATTTTG..............................................................241.000.00------1.00-------------
....................................................................................................................................................................TTGACTTTTTTTTTTTTTATTTTCTTG...........................................................271.000.00----1.00---------------
.........................................................................GTTTTCTGTCTGTCTTTGTGGC...........................................................................................................................................................221.000.00----------1.00---------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTAAAAT..........................................................251.000.00-----1.00--------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTCCAG............................................................221.000.00---1.00----------------
..............................................................................................................................................................................TTTTTTTTATTTTAAGAACCG.......................................................211.000.00---------------1.00----
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTCTCG...........................................................241.000.00---1.00----------------
...................TACAAGTATGGAGAAGGCAAAAGGCAA............................................................................................................................................................................................................2711.001.00---------1.00----------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTCACT...........................................................241.000.00-----1.00--------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTATTG............................................................231.000.00------1.00-------------
.........................................................................................................................................................................TTTTTTTTTTTTTATTTTATATT..........................................................231.000.00---1.00----------------
.....................................................................................................................................................TCGAATTTTCTCCTCTTGGTCT...............................................................................221.000.00------------1.00-------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAAACG..........................................................241.000.00---1.00----------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAAATAT.........................................................251.000.00-1.00------------------
.....................CAAGTATGGAGAAGGTTA...................................................................................................................................................................................................................181.000.00--------------1.00-----
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTAAGG............................................................231.000.00--1.00-----------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTACCTG..........................................................241.000.00-1.00------------------
.............................................................................TCTGTCTGTCTTTGTGTCG..........................................................................................................................................................191.000.00-------------1.00------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAATTT..........................................................241.000.001.00-------------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAAATG..........................................................241.000.001.00-------------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTCAAG.............................................................221.000.00-----1.00--------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTGGTG.............................................................221.000.00------1.00-------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTCTAT............................................................221.000.00-----1.00--------------
..................................................................................................................................................................TCTTGACTTTTTTTTTTTTCGAG.................................................................231.000.00------1.00-------------
..........................................................................TTTTCTGTCTGTCTTTGTGGC...........................................................................................................................................................211.000.00-----------1.00--------
...............................................................................................................................................................TCCTCTTGACTTTTTTTTTTTTTGG..................................................................251.000.00----1.00---------------
..................................................................................................................................................................TCTTGACTTTTTTTTTTTTTAACT................................................................241.000.00------1.00-------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTACTT............................................................221.000.00-----1.00--------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTCCG..............................................................211.000.00---1.00----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATCAGG..............................................................211.000.001.00-------------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTAAAAG..........................................................251.000.00--1.00-----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTCCAG............................................................231.000.00----1.00---------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTGTTG............................................................231.000.00----1.00---------------
...................TACAAGTATGGAGAAGGCAAAAGGC..............................................................................................................................................................................................................2511.001.00---------1.00----------
...................................................................................................................................................................CTTGACTTTTTTTTTTTTCTA..................................................................211.000.00----1.00---------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTCCTT.............................................................221.000.00-1.00------------------
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAACATT.........................................................251.000.001.00-------------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTATG............................................................231.000.00--1.00-----------------
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTAAAA............................................................231.000.00--1.00-----------------
.......................................................................TTGTTTTCTGTCTGTCTTT................................................................................................................................................................1920.500.50----------------0.50---
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAAG............................................................2250.400.400.200.20------------------
........................................................................TGTTTTCTGTCTGTCTTT................................................................................................................................................................1840.250.25-----------------0.25--
........................................................................................................................................................................CTTTTTTTTTTTTTATTTTAAGG...........................................................2350.200.40-0.20------------------
...........................................................................TTTCTGTCTGTCTTTGTG.............................................................................................................................................................1860.170.17-------------------0.17
...........................................................................TTTCTGTCTGTCTTTGT..............................................................................................................................................................1780.120.12----------0.12---------

Antisense strand
TGCGAGGCTCCGCTTCTTCTACAAGTATGGAGAAGGCAAAAGGCAAGGAGGTCAGTACAGTTTTAGTGGATTTGTTTTCTGTCTGTCTTTGTGTTTCTGTCTTCCCTGGGCACTCCTGATTTTTCCTTTAAGGAGAAAAGAATGTGCCTTCGAATTTTCTCCTCTTGACTTTTTTTTTTTTTATTTTAAGAGTAAGGCCCAAGAATATGATTGCAGCCTGGTATATTGGAGTGAGCAGACAAGTAAGAAA
.....................................................................................................................................((((((...((......))..)))))).(((((((.................)))))))..........................................................
.....................................................................................................................................134.........................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189782SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................................................................ACTTTTTTTTTTTTTATTTTTGT............................................................ 232.000.00-------2.00------------
......................................................................................................................................................................GACTTTTTTTTTTTTTATTGTGT............................................................. 231.000.00-------1.00------------
.......................................CTGACCTCCTTGCCTT................................................................................................................................................................................................... 1690.220.22------------------0.22-