ID: uc003dwt.1_intron_6_0_chr3_107778392_r.5p
GENE: CD47(4)
chr3:107779392-107779641-


(1)
AGO2.ip 		(4)
B-CELL 		(1)
BRAIN 		(1)
BREAST 		(6)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(1)
LIVER 		(2)
OTHER 		(9)
SKIN 		(1)
TESTES

Sense strand
ACTAGTGATCACTGTCATTGTCATTGTTGGAGCCATTCTTTTCGTCCCAGGTAAGATGTGCAGTTCCTAGGCAGGAACGCAGGAGGTAGATGAGTGCATTCCAAGGTGAGGAGGGCTGCATTAGTTTCCTAGGGCTGTTGGAACAGATGACCACAAACTGGGTGGCTTAAACAATAGCAATTCCCTTTCCATGCTGGAGGCCATAAGTCTGAAATCAGGACGTCATCAGGGCCACACTCCCTCTCAAGGC
................................................................................((((((..((((...((.((((.......)))).))..))))..))))))....((((....))))........................................................................................................
......................................................................71..........................................................................147.....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................ACGCAGGAGGTAGATC..............................................................................................................................................................1653.000.0053.00----------------------------
...........................................................................AACGCAGGAGGTAGAGGG.............................................................................................................................................................183.000.00----3.00------------------------
............TGTCATTGTCATTGTTGGAGC.........................................................................................................................................................................................................................2113.003.00--3.00--------------------------
.............................................................................................................................TTCCTAGGGCTGTTGTCG...........................................................................................................182.000.00------2.00----------------------
..........ACTGTCATTGTCATTGTTGGAGC.........................................................................................................................................................................................................................2312.002.00---1.00-------------------1.00-----
..........ACTGTCATTGTCATTGTTGGAGCC........................................................................................................................................................................................................................2412.002.00-1.00--------------------1.00------
....GTGATCACTGTCATTGTCATTGTTGGAGC.........................................................................................................................................................................................................................2911.001.00-1.00---------------------------
...........................................................................................................................GTTTCCTAGGGCTGTTGGAA...........................................................................................................2011.001.00-1.00---------------------------
..........ACTGTCATTGTCATTGTTGGAG..........................................................................................................................................................................................................................2211.001.00-------------1.00---------------
...............CATTGTCATTGTTGGAGCCATTCTTTTCGTCCC..........................................................................................................................................................................................................3311.001.00-1.00---------------------------
..........ACTGTCATTGTCATTGTTGGAGCCCT......................................................................................................................................................................................................................2611.002.00---------------------1.00-------
....................TCATTGTTGGAGCCATT.....................................................................................................................................................................................................................1711.001.00-1.00---------------------------
.....................................................................................................................................................................CTTAAACAATAGCAATACT..................................................................191.000.00------------1.00----------------
..........................................................................................................................AGTTTCCTAGGGCTGTTGGAACAGATGACCAC................................................................................................3211.001.00--1.00--------------------------
.............................................................................CGCAGGAGGTAGATGAGT...........................................................................................................................................................1811.001.00----------1.00------------------
..............................AGCCATTCTTTTCGTCCCAGG.......................................................................................................................................................................................................2111.001.00----------------1.00------------
..................................ATTCTTTTCGTCCCAGGTGA....................................................................................................................................................................................................201.000.00--1.00--------------------------
.............GTCATTGTCATTGTTGGAGCCATTCTTTTCG..............................................................................................................................................................................................................3111.001.00---1.00-------------------------
.........CACTGTCATTGTCATTGTTGGAG..........................................................................................................................................................................................................................2311.001.00-------------------1.00---------
...................GTCATTGTTGGAGCCATTCTTTTC...............................................................................................................................................................................................................2411.001.00--------1.00--------------------
...............CATTGTCATTGTTGGAG..........................................................................................................................................................................................................................1711.001.00------------------------1.00----
....................TCATTGTTGGAGCCATTTT...................................................................................................................................................................................................................1911.001.00-----------------1.00-----------
................ATTGTCATTGTTGGAGCC........................................................................................................................................................................................................................1811.001.00-----1.00-----------------------
....GTGATCACTGTCATTGTCATTGTTGGA...........................................................................................................................................................................................................................2711.001.00--1.00--------------------------
.............GTCATTGTCATTGTTGGATC.........................................................................................................................................................................................................................201.000.00---------1.00-------------------
.........................................................................GGAACGCAGGAGGTAGATA..............................................................................................................................................................191.000.00--------------------1.00--------
......GATCACTGTCATTGTCATTGTTGGAGC.........................................................................................................................................................................................................................2711.001.00---1.00-------------------------
..........................................................................................................................AGTTTCCTAGGGCTGTTGGAA...........................................................................................................2111.001.00------------------1.00----------
...................GTCATTGTTGGAGCCATTCTTTTCGTCCCAGG.......................................................................................................................................................................................................3211.001.00-1.00---------------------------
..........................TTGGAGCCATTCTTTTCGTCCCAGGTAAGAT.................................................................................................................................................................................................3111.001.00--------------1.00--------------
..................TGTCATTGTTGGAGCCATTCT...................................................................................................................................................................................................................2111.001.00-----1.00-----------------------
.................TTGTCATTGTTGGAGCCATTCTTTTCGTCC...........................................................................................................................................................................................................3011.001.00-----------1.00-----------------
......................ATTGTTGGAGCCATTC....................................................................................................................................................................................................................1620.500.50-0.50---------------------------
......................ATTGTTGGAGCCATTCT...................................................................................................................................................................................................................1720.500.50-------------------------0.50---
....................................................................................................CCAAGGTGAGGAGGGC......................................................................................................................................1670.290.29---------------------------0.140.14
.......................TTGTTGGAGCCATTC....................................................................................................................................................................................................................1550.200.20-0.20---------------------------
.....................CATTGTTGGAGCCAT......................................................................................................................................................................................................................1550.200.20--------------------------0.20--

Antisense strand
ACTAGTGATCACTGTCATTGTCATTGTTGGAGCCATTCTTTTCGTCCCAGGTAAGATGTGCAGTTCCTAGGCAGGAACGCAGGAGGTAGATGAGTGCATTCCAAGGTGAGGAGGGCTGCATTAGTTTCCTAGGGCTGTTGGAACAGATGACCACAAACTGGGTGGCTTAAACAATAGCAATTCCCTTTCCATGCTGGAGGCCATAAGTCTGAAATCAGGACGTCATCAGGGCCACACTCCCTCTCAAGGC
................................................................................((((((..((((...((.((((.......)))).))..))))..))))))....((((....))))........................................................................................................
......................................................................71..........................................................................147.....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR189782SRR189785SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............GTCATTGTCATTGTTGGGA.......................................................................................................................................................................................................................... 191.000.00---------------1.00-------------
..................................ATTCTTTTCGTCCCAC........................................................................................................................................................................................................ 161.000.001.00----------------------------
......................................................................................CTTGGAATGCACTCATCTA................................................................................................................................................. 1911.001.00---1.00-------------------------
.....................................ACCTGGGACGAAAAG...................................................................................................................................................................................................... 1520.500.50-0.50---------------------------