ID: uc003dtm.2_intron_3_0_chr3_99648874_r.5p
GENE: (2)
chr3:99649413-99649662-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
B-CELL
(3)
BRAIN
(17)
BREAST
(22)
CELL-LINE
(4)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(2)
LIVER
(1)
OTHER
(1)
RRP40.ip
(9)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
CAAGAGATGACCTGTTATTTCTCCTCAGCATTCTGGAGGGAGAACTGCAGGTCAGCTGGGTTGGAGTTATCCCCATCATGCTTCAAACAGAAGGCTGCTTGTGAATTTGGTGTTCCTGCTGCCACAGAAATAGATATCTGTGGTTCATACATGTGTGTACATGAAAGCAAAGCATAAGTATATATACAAAGAATTCTCCTCTGCCAACTCAAAGTGCAATTAATCCCATCTAAAGGGGCTGTCATGATGA
............................................................................................(((.......((((((.(((((..((((((((((((........)))))))).....(((((....)))))..)))).)))))..(((....)))...))))))......))).............................................
..................................................................................83...........................................................................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR189785SRR189787SRR343334SRR189786SRR343335SRR343336SRR189783SRR343337SRR037937(GSM510475)
293cand2. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577740(Rovira)
total RNA. (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038856(GSM458539)
D11. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040030(GSM532915)
G013N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR191452(GSM715562)
178genomic small RNA (size selected RNA from . (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTG..............................................184542.000.002451.00958.00739.003.00159.007.00135.0023.0039.0025.001.00--------1.00--------------------------1.00-------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGGG............................................20477.000.005.00-2.00320.00-101.00----2.002.003.001.003.002.001.002.002.001.001.001.002.00-1.00-1.001.00-1.00--1.001.00---1.00-1.00-1.00--1.001.00-1.00----1.001.00-1.00--1.00-----1.001.00-1.001.00-1.001.001.001.00-1.001.00-
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTG..............................................18273.000.00192.0036.0039.00-3.001.001.00-1.00---------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCG..............................................18249.000.00160.0073.0015.00---1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGG.............................................19104.000.005.006.00-46.00-35.00-----1.001.001.00----1.00--1.00--1.00-----1.00----1.00--1.00-----------------1.00----1.00------------1.00---
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGA.............................................1999.000.00---3.0030.00-30.0021.00-14.00------------------1.00-------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCGGG............................................2046.000.00---39.00-6.00--------------1.00---------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTG...............................................17343.6743.6723.0015.673.67-0.67-0.33-0.33---------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTA..............................................1835.000.0021.004.009.00---1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTGG.............................................1934.000.00---25.00-9.00------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTAG..............................................1834.000.006.0026.002.00---------------------------------------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTTG..............................................1728.000.0022.005.001.00---------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCATG..............................................1824.000.0010.0012.001.00-----1.00---------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCGG.............................................1920.000.00---12.00-8.00------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGTG..............................................1820.000.006.0014.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGG..............................................18318.0043.675.0011.670.330.67-0.33------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCG...............................................1714.000.008.001.005.00---------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGGCT...........................................21311.3343.671.00--7.00-2.670.33--------------------0.33--------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTA..............................................1811.000.007.002.002.00---------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCGG..............................................1811.000.004.002.00-5.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGTG............................................207.000.00---2.00-1.00----1.001.00---1.001.00-------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGG.............................................1936.3343.670.33--4.33-1.67------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGGT............................................206.000.00---2.00---------2.00------------------------------------1.001.00--------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGGG..............................................184.000.00-1.00-1.00-2.00------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTAC..............................................184.000.00-4.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGGA............................................204.000.00---4.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGGGC.............................................194.000.00---3.00--------1.00-----------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCACG..............................................183.000.00-3.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCCG..............................................183.000.002.001.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGAA............................................203.000.00----1.00-1.00-----------------------------------1.00-----------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTTGGG............................................193.000.001.00--2.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGCG............................................203.000.00-1.00-2.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCC..............................................183.000.00-3.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCAG...............................................172.000.002.00-----------------------------------------------------------------------------
.......................................................................................CAGAAGGCTGCTTGTTCGG................................................................................................................................................192.000.00-------------------------1.00----------------------------1.00-----------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCCGG.............................................192.000.00---1.00-1.00------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCGGG.............................................192.000.00---2.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGTC............................................202.000.00-1.00--------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGCG..............................................182.000.002.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTGA.............................................192.000.00----1.00-1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGTT............................................202.000.00-----------2.00------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCA................................................162.000.002.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCAAG..............................................182.000.001.001.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGT...............................................172.000.00-2.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGGC............................................2032.0043.67-0.670.330.67-0.33------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTATC............................................201.000.00-1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTTA..............................................171.000.001.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................ACAAAGAATTCTCCTGTTG..............................................191.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTAGGG............................................201.000.00----------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCGAC............................................201.000.00-1.00----------------------------------------------------------------------------
........................................................................................................................................................................................TACAAAGAATTCTCCTCTTA..............................................201.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCTG.............................................191.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTCGAG............................................201.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTCTG............................................201.000.00---1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTTGT............................................201.000.00---1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTAGG............................................201.000.00----------------------------------------1.00-------------------------------------
......................................................................................ACAGAAGGCTGCTTGTTTT.................................................................................................................................................191.000.00----------------1.00-------------------------------------------------------------
.........................................................................................................................................................................................ACAAAGAATTCTCCTCTTG..............................................191.000.001.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTAG.............................................191.000.001.00-----------------------------------------------------------------------------
.......................................................................................CAGAAGGCTGCTTGTTCG.................................................................................................................................................181.000.00---------------------------------------------------------1.00--------------------
.............................................................................................................................................................................................AGAATTCTCCTCTGCCAACCATG......................................231.000.00-----------------------1.00------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGCTT...........................................2131.0043.670.330.33---0.33------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCAGG..............................................181.000.00-1.00----------------------------------------------------------------------------
....................CTCCTCAGCATTCTGGAGG...................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------1.00---------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGAG..............................................181.000.001.00-----------------------------------------------------------------------------
......................................................................................ACAGAAGGCTGCTTGTGTGGT...............................................................................................................................................211.000.00-------------------------------------------1.00----------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCAG..............................................181.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTTGG............................................201.000.00--------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTCG..............................................171.000.001.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTGC.............................................191.000.00---------------------------------------------------------------1.00--------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGGC............................................201.000.00--------------1.00---------------------------------------------------------------
.....................................................................................AACAGAAGGCTGCTTGT....................................................................................................................................................1711.001.00-------------------------------------------------1.00----------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTGAG............................................201.000.00-----------------1.00------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGGCT.............................................191.000.00---1.00--------------------------------------------------------------------------
.......................................................................................CAGAAGGCTGCTTGTTGG.................................................................................................................................................181.000.00-----------------------------------------------------------1.00------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTGCGCTT..........................................211.000.00---1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGTC..............................................181.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCATC..............................................181.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTAAA............................................201.000.00------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTTGA.............................................181.000.00----1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................ACAAAGAATTCTCCTCTCT..............................................191.000.00-1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................ACAAAGAATTCTCCTAGTG..............................................191.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTTTG............................................201.000.00-1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTTGG.............................................181.000.00----------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCGAGC.............................................191.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCCTTT.............................................191.000.00-1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................ACAAAGAATTCTCCTATTG..............................................191.000.00-1.00----------------------------------------------------------------------------
......................................................................................ACAGAAGGCTGCTTGTGGGGG...............................................................................................................................................211.000.00-------------------------------1.00----------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTCGGG............................................191.000.00---1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTTCGG............................................201.000.00---1.00--------------------------------------------------------------------------
........................................................................................................................................................................................TACAAAGAATTCTCCAAAA...............................................191.000.00---------------------------------------------------------------------1.00--------
.............................................................................................................................................................................................AGAATTCTCCTCTGCCAC...........................................181.000.00----------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGCCG............................................201.000.00---1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGC..............................................1830.670.67-0.67----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGGCC...........................................2130.6743.67---0.33-0.33------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGGGC...........................................2130.6743.67---0.33-------0.33------------------------------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTGGGCT...........................................2060.500.17---0.17-0.33------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGTC............................................2030.3343.67-----------0.33------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGT..............................................1830.3343.67-0.33----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGAA............................................2030.3343.67---0.33--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGT.............................................1930.3343.67---0.33--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGCG............................................2030.3343.67-0.33----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGCTG...........................................2130.3343.67-0.33----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGTGGC...........................................2130.3343.67-----------0.33------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGGA............................................2030.3343.67-0.33----------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGTGC...........................................2130.3343.67-----------0.33------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGTTT...........................................2130.3343.67----------0.33-------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGGGG............................................2030.3343.67---0.33--------------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGCGGCT..........................................2230.330.67----------0.33-------------------------------------------------------------------
..........................................................................................................................................................................................CAAAGAATTCTCCTCTGA..............................................1830.3343.670.33-----------------------------------------------------------------------------
...........................................................................................................................................................................................AAAGAATTCTCCTCTG...............................................1660.170.170.17-----------------------------------------------------------------------------

Antisense strand
CAAGAGATGACCTGTTATTTCTCCTCAGCATTCTGGAGGGAGAACTGCAGGTCAGCTGGGTTGGAGTTATCCCCATCATGCTTCAAACAGAAGGCTGCTTGTGAATTTGGTGTTCCTGCTGCCACAGAAATAGATATCTGTGGTTCATACATGTGTGTACATGAAAGCAAAGCATAAGTATATATACAAAGAATTCTCCTCTGCCAACTCAAAGTGCAATTAATCCCATCTAAAGGGGCTGTCATGATGA
............................................................................................(((.......((((((.(((((..((((((((((((........)))))))).....(((((....)))))..)))).)))))..(((....)))...))))))......))).............................................
..................................................................................83...........................................................................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189782SRR189785SRR189787SRR343334SRR189786SRR343335SRR343336SRR189783SRR343337SRR037937(GSM510475)
293cand2. (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
TAX577739(Rovira)
total RNA. (breast)
SRR037938(GSM510476)
293Red. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577740(Rovira)
total RNA. (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038856(GSM458539)
D11. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR040030(GSM532915)
G013N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR191452(GSM715562)
178genomic small RNA (size selected RNA from . (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191617(GSM715727)
104genomic small RNA (size selected RNA from . (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR191572(GSM715682)
66genomic small RNA (size selected RNA from t. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
............................................................................................................................................................................................AAGAATTCTCCTCTGCCAACTCAAAGTGCG................................ 301.000.00-----------------------1.00------------------------------------------------------
..................................................................................................................................................ATACATGTGTGTACATGAAACA.................................................................................. 221.000.00----------1.00-------------------------------------------------------------------
..........................................................................................................................................................................................................ATGGGATTAATTGCACTTTGAGTTGGC..................... 2711.001.00-------------------------1.00----------------------------------------------------
........................................................................................................................................................................................TACAAAGAATTCTCCTCC................................................ 181.000.00------------------------------------------------------------------1.00-----------
...............................................................GAGTTATCCCCATCATG.......................................................................................................................................................................... 171.000.00----------------------------------1.00-------------------------------------------
...........................................................................................................................................................................GCATAAGTATATATAACG............................................................. 181.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................TGAGTTGGCAGAGGAGAATTC....................................... 2111.001.00------------------------------------------------1.00-----------------------------
...............................................................................................................................................................................................TGAGTTGGCAGAGGAGAATT....................................... 2011.001.00------------------------------------------------------------1.00-----------------
.................................................................................................................................................................................................GAGTTGGCAGAGGAGAA........................................ 1730.330.33-----------------------------------------------------------------------------0.33