| (1) AGO2.ip | (1) B-CELL | (3) BREAST | (7) CELL-LINE | (1) CERVIX | (1) FIBROBLAST | (2) HEART | (2) LIVER | (1) OTHER | (3) SKIN | (1) UTERUS | (1) XRN.ip |
| CATTCAGAGGAGACGGCAAAGTTATAAAATTATTTGCAAAGCACATAAAGGTAAGCAAGGGCCTGTGTGATCCCTAAAGGCCTCTCCCAGACCTCAGCTTTTTTCCTTTCAACCTCTTCTCCTAATCTCCTTAGCACATATTTTATTGAGTTCCTTCCTTATGTAACATTTAACAACTTTTCTGGTTTTTTAAATTCTATGCTTCTGCATACCTACCTCCCCAGTATGGCAGTCGCTACTGCCATGCTCTGTCCCTGTATAGAACCTGAGGCTTGACCCTTTGATTCCTTGAAGATTACCAGTTTTCTAGGGATATGCTCATCTCTGCCCTGGAAGTCGACCCTACACAAGGGTAGCTCCATTTGTATTTCACTTTCTTAACTTTGAGATAAAATGTTCTAAATTGGTGTAAGATAGCACTTTCTTAATGACTTCCTTTTCTTTCTTCTCTTTCATCTTGGAACAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGT ....................................................((((..(((.(((...((..((....))..))...))).)))..))))..........................(((..(((........)))..))).............................................................................................................................................................................................................................................................................................................................................................................. ..................................................51.................................................................................................150............................................................................................................................................................................................................................................................................................................................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189782 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189787 | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR040007(GSM532892) G601T. (cervix) | SRR363676(GSM830253) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR343337 | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191540(GSM715650) 62genomic small RNA (size selected RNA from t. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................CTTTTTTCCTTTCAACTTAG............................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 29.00 | 0.00 | 16.00 | 10.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCTTTTCTTTCTTCTTAG................................................................ | 21 | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................GTAAGCAAGGGCCTGTGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGC.......... | 35 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTTTTCTTTCTTCTCTTTTTG............................................................ | 24 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTGTGGTGCACCTGGGTGC | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................AGGCCTCTCCCAGACCTCAGCTTTTTTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................CTTTTTTCCTTTCAACCTAG............................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCGTGTGGTGCACCTGGGC.. | 23 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......GAGGAGACGGCAAAGCCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTAAATTGGTGTTTC....................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................CATACCTACCTCCCCTAG................................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGAAGCGTGTGGTGCACCT...... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTCTTTCATCTTTTTG..................................................... | 22 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTTTTCTTTCTTCTCGGG............................................................... | 21 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGGAGAAGCGTGTGGTGCACCTGGGTGC | 32 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GCAAGGGCCTGTGTGAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................................TAGCTCCATTTGTATTCGG................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCGTGTGGTGCACCCGGG... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAAAGTTGCTGGAGAAG.................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................TTATAAAATTATTTGCAAAGCACATAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................TATAAAATTATTTGCAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................TTCTGCATACCTACCCTA........................................................................................................................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................................TGCTCTGTCCCTGTATAGAACCTGAGGC.................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCGTGTGGTGCACCTGGGTGC | 25 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................CTTTTTTCCTTTCAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGCTGGAGAAGCGTGTGGTGCACCCGG.... | 30 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTTTCTTTCTTCGAGG................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTTTCTTTCTTCTCGTA............................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTTTCTTCTCTTTTAG............................................................ | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGGAGAAGCGTGTGGTGCACCTGGGCG. | 31 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................CTCAGCTTTTTTCCTTTGTAG................................................................................................................................................................................................................................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGAAGCGTGTGGTGCACCT...... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................ATTATTTGCAAAGCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 |
| CATTCAGAGGAGACGGCAAAGTTATAAAATTATTTGCAAAGCACATAAAGGTAAGCAAGGGCCTGTGTGATCCCTAAAGGCCTCTCCCAGACCTCAGCTTTTTTCCTTTCAACCTCTTCTCCTAATCTCCTTAGCACATATTTTATTGAGTTCCTTCCTTATGTAACATTTAACAACTTTTCTGGTTTTTTAAATTCTATGCTTCTGCATACCTACCTCCCCAGTATGGCAGTCGCTACTGCCATGCTCTGTCCCTGTATAGAACCTGAGGCTTGACCCTTTGATTCCTTGAAGATTACCAGTTTTCTAGGGATATGCTCATCTCTGCCCTGGAAGTCGACCCTACACAAGGGTAGCTCCATTTGTATTTCACTTTCTTAACTTTGAGATAAAATGTTCTAAATTGGTGTAAGATAGCACTTTCTTAATGACTTCCTTTTCTTTCTTCTCTTTCATCTTGGAACAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGT ....................................................((((..(((.(((...((..((....))..))...))).)))..))))..........................(((..(((........)))..))).............................................................................................................................................................................................................................................................................................................................................................................. ..................................................51.................................................................................................150............................................................................................................................................................................................................................................................................................................................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189782 | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | SRR189787 | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR040007(GSM532892) G601T. (cervix) | SRR363676(GSM830253) cell type: human foreskin fibroblasts (HFF)tr. (fibroblast) | SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line) | SRR033723(GSM497068) L1236 cell line (L1236). (B cell) | SRR330878(SRX091716) tissue: skin psoriatic involveddisease state:. (skin) | SRR343337 | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR191540(GSM715650) 62genomic small RNA (size selected RNA from t. (breast) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................................ATACCTACCTCCCCAAGTC................................................................................................................................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................................................................................................................TCCAGGGCAGAGATGAGC...................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................CTGCATACCTACCTCCCCAGG................................................................................................................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................................TCTATACAGGGACAGAGC............................................................................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TAGGAGAAGAGGTTGAAAGGAAAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................AGGTAAGCAAGGGCCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................................................................................TACACAAGGGTAGCTCTTGT......................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................ATACCTACCTCCCCAAG................................................................................................................................................................................................................................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................................................................................................................................................................................................CAGGGCAGAGATGAGC........................................................................................................................................................................................ | 16 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - |