| (1) BRAIN | (1) BREAST | (6) CELL-LINE | (1) CERVIX | (1) HELA | (2) LIVER | (1) OTHER | (3) SKIN | (1) TESTES |
| GTCTATCTCTGGAAAAATTGGTCAATGAGCACAAGTGCCTGTGTCAGATAGTAAGGTTTTTTTTTTTTTTTTAATTTTAATTTTTTGTCCTTTCAAATAGGTTCAGTATAACTTGGTTTTTATAAAAGTGATAGCAATTAAAAGGCAATGTTTTCAAAGAATTTTTTGTAACCTATGAAATCACATTCCCATTTTTCTGTTGATATAACTTAATACCATAATATTTGTTGTCTATTTCATTGTTATTTCC ..........................................................................((((((((..(((((((((....((((((......)))))).........)))).))))).))))))))((.((((((((((.((.............)).)))))..))))).))............................................................ ..................................................51...................................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR330909(SRX091747) tissue: normal skindisease state: normal. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR553576(SRX182782) source: Testis. (testes) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | TAX577453(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR040029(GSM532914) G026T. (cervix) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................AAGGTTTTTTTTTTTTTTTTCCCC.............................................................................................................................................................................. | 24 | 5.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGGTTTTTTTTTTTTTTTTAATTTAGC.......................................................................................................................................................................... | 27 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTTTTTTTTTTTTAATTTTAATTTG...................................................................................................................................................................... | 26 | 2.00 | 0.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTTTTTTTTTTTTTTAATTTTAATTTAT..................................................................................................................................................................... | 28 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTTTTTTTTTTTTTTAATTTTAATCTG...................................................................................................................................................................... | 27 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................TTTTTTTTTTAATTTTAATCTAG..................................................................................................................................................................... | 23 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTTTTTTTTTTTTTTAATTTTAATTTG...................................................................................................................................................................... | 27 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTTTTTTTTTTTTTTAATTTTAATTTAG..................................................................................................................................................................... | 28 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTTTTTTTTTTTTAATTTTAATCTG...................................................................................................................................................................... | 26 | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTTTTTTTAATTTTAATCTG...................................................................................................................................................................... | 25 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AAGGTTTTTTTTTTTTTTTTCACT.............................................................................................................................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GGTTTTTTTTTTTTTTTTAATCTCC........................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGGTTTTTTTTTTTTTTTTAATACCG........................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTTTTTTTTTTTTAATTTTAATATG...................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGGTTTTTTTTTTTTTTTTAATTCTC........................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTTTTTTTTTTTTAATTTTAACCG....................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AAGGTTTTTTTTTTTTTTTTCCGG.............................................................................................................................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGGTTTTTTTTTTTTTTTTATTTC............................................................................................................................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AAGGTTTTTTTTTTTTTTTTAATTTAGC.......................................................................................................................................................................... | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................AGTGCCTGTGTCAGACCT....................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................TTTTTTTTTTAATTTTAATTTTCAAG.................................................................................................................................................................. | 26 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTTTTTTTAATTTTAATTTTTTCCTG................................................................................................................................................................ | 31 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AAGGTTTTTTTTTTTTTTTTAGGTT............................................................................................................................................................................. | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................TTTTTTTTTTTAATTTTAATTGG...................................................................................................................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTTTTTTTTTTTTAATTTTAATTTTTTG................................................................................................................................................................... | 29 | 2 | 1.00 | 1.00 | - | - | 0.50 | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TTTTTTTTTTTTAATTTTAATTTTTGG................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................TTTTTTTTTTTTAATTTTACCCC....................................................................................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................ATCACATTCCCATTTATTT.................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .....................................................AGGTTTTTTTTTTTTTTTTCATC.............................................................................................................................................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................TTTTTTTTTTTTTAATTTTAATTTTTTCGAG................................................................................................................................................................ | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................TTTTTTTTTTTTTTAATTTTAACCTG...................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................ATAGTAAGGTTTTTTTTTTTTTTTTAATT.............................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TTTTTTTTTTTTTTAATTTTAACCAG...................................................................................................................................................................... | 26 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................AAGGTTTTTTTTTTTTTTTTAATTGT............................................................................................................................................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................GGTTTTTTTTTTTTTTTTAATTTTAATTTTTTTT.................................................................................................................................................................. | 34 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGGTTTTTTTTTTTTTTTTCGGA.............................................................................................................................................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................TTTTTTTTTAATTTTAATTTTTTTAAT................................................................................................................................................................ | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .TCTATCTCTGGAAAAGCA....................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...............................................................TTTTTTTTTAATTTTAATTTTTTGTCCTTTC............................................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......TCTGGAAAAATTGGTCAATGAGCACAAGTGCC................................................................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................AGGTTTTTTTTTTTTTTTTCGAA.............................................................................................................................................................................. | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................AGGCAATGTTTTCAAAGAATT....................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .........TGGAAAAATTGGTCAATGAG............................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................TTTTTTTTTTTTTTTTAATTTTAATCTAG..................................................................................................................................................................... | 29 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................TGGTCAATGAGCACAAGTGCC................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................TTTTTTTTTTTTAATTTTAATTTTTTCCTG................................................................................................................................................................ | 30 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................ATAGTAAGGTTTTTTTTTTTTTTTTAACTT............................................................................................................................................................................. | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................TTTTTTTTTTTTTTTAATTTTAATCTAG..................................................................................................................................................................... | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................TAACTTAATACCATAATCTTC........................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ........................................................TTTTTTTTTTTTTTTTAATTTTAATCT....................................................................................................................................................................... | 27 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................TTCCCATTTTTCTGTTGAT.............................................. | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ...............................................ATAGTAAGGTTTTTTTTTTTTT..................................................................................................................................................................................... | 22 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AAGGTTTTTTTTTTTTTTTTAATTTTTCCT........................................................................................................................................................................ | 30 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AAGGTTTTTTTTTTTTTTTTAATTTT............................................................................................................................................................................ | 26 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................TTTTTTTTTTTTAATTTTAATTTTTTG................................................................................................................................................................... | 27 | 4 | 0.25 | 0.25 | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................AGGTTTTTTTTTTTTTTTTAATTTT............................................................................................................................................................................ | 25 | 5 | 0.20 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GTCTATCTCTGGAAAAATTGGTCAATGAGCACAAGTGCCTGTGTCAGATAGTAAGGTTTTTTTTTTTTTTTTAATTTTAATTTTTTGTCCTTTCAAATAGGTTCAGTATAACTTGGTTTTTATAAAAGTGATAGCAATTAAAAGGCAATGTTTTCAAAGAATTTTTTGTAACCTATGAAATCACATTCCCATTTTTCTGTTGATATAACTTAATACCATAATATTTGTTGTCTATTTCATTGTTATTTCC ..........................................................................((((((((..(((((((((....((((((......)))))).........)))).))))).))))))))((.((((((((((.((.............)).)))))..))))).))............................................................ ..................................................51...................................................................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR330911(SRX091749) tissue: normal skindisease state: normal. (skin) | SRR330909(SRX091747) tissue: normal skindisease state: normal. (skin) | SRR330874(SRX091712) tissue: skin psoriatic involveddisease state:. (skin) | DRR001489(DRX001043) "Hela short nuclear cell fraction, control". (hela) | SRR553576(SRX182782) source: Testis. (testes) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | TAX577453(Rovira) total RNA. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR040029(GSM532914) G026T. (cervix) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................ACATTCCCATTTTTCCT................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ...............................................ATAGTAAGGTTTTTTATG......................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................CAAAGAATTTTTTGTTAGC............................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |