ID: uc003dqx.1_intron_5_0_chr3_89445112_f.5p
GENE: EPHA3(6)
chr3:89445062-89445311+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(25)
B-CELL 		(5)
BREAST 		(30)
CELL-LINE 		(24)
CERVIX 		(1)
FIBROBLAST 		(8)
HEART 		(1)
HELA 		(8)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(45)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
AACATCCTAATGGGATCATATTGGACTACGAGGTCAAATACTATGAAAAGGTGGGGAAACAATGTTTAAGGGTTGGGCTGTGTAGGCAAGAAGCTGTTTCCTCATGAGCTGTGCTCTTGCAAAGAAACCAGTGACATTCCTGGTAAATGGTAGAGCACTGTTTAGAACTGTGGCCCTGTGACCCCTTTGATTTATTGGTAGAGGAAGGTTTAGAAAGAATCTTGTTGAATACCCCCTATTCTACAGCAAT
...............................................................((((.((((...((((.((....))...))))...))))..(((((.((((((.(((......(((((.((...))))))).....))))))))).)))))))))..................................................................................
..............................................................63........................................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR343335SRR343334SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189785SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040011(GSM532896)
G529T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040029(GSM532914)
G026T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR040018(GSM532903)
G701N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040033(GSM532918)
G603T. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR040019(GSM532904)
G701T. (cervix)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532885(GSM532885)
G850N. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040023(GSM532908)
G575T. (cervix)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029130(GSM416759)
DLD2. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR040027(GSM532912)
G220T. (cervix)
....................................................................................................................................................GGTAGAGCACTGTTTAG.....................................................................................171159.00159.0049.0042.0022.0026.0014.00---1.00-----------------1.00-----2.00--------------1.00-1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGG....................................................................................18161.00159.009.008.0025.001.006.00---2.00------3.00--------2.001.00----------------1.00-----1.00---1.00-------------------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGGC...................................................................................19159.00159.0010.004.00-9.007.004.003.003.002.004.00---3.00------1.001.00--------1.00----1.00---1.00----1.00--------1.00---1.00----1.00----1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGGCTA.................................................................................1955.000.003.001.00--3.006.002.002.00-7.001.005.003.002.002.00-1.001.002.002.00--1.00-1.001.00-------1.00-1.00-1.002.00--------------------1.00-----1.00--1.00-1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGGC...................................................................................18254.0051.0010.0018.005.003.503.00-0.500.501.50--0.500.501.500.500.50-0.50---0.50-----0.50------0.50----0.500.500.50------------------------------------------0.500.50-0.50-0.50-0.500.500.500.50-0.500.50--------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAG.....................................................................................16251.0051.0021.0020.00-4.004.50----------------0.50----------------------------0.50-----------------------------------0.50-------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGGCTA.................................................................................21150.00159.007.008.00-3.005.007.00----1.005.00-1.00--3.00--------------2.00-1.00--2.00--------------1.00----1.00-1.00----------------1.00-----1.00------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGGC...................................................................................1745.000.004.001.0021.008.005.00---------------------2.00-1.00----------------1.00-----------------1.00-------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGGCT..................................................................................20140.00159.006.007.008.005.002.00-1.001.001.00-3.00--1.00------2.00--1.00----------------------------------------1.00---------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGGCT..................................................................................1828.000.002.002.001.005.004.00-1.001.00----2.00-1.00--1.00-2.00---2.00----------------1.00--1.00-----------1.00---------------------1.00----------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTCGGC...................................................................................19624.506.500.17-13.50-0.17---3.17------0.17-----0.50-----0.170.17-----0.50-----0.17---0.17---------------1.001.00----------------------------0.67-------------0.330.33--0.170.17-----0.17---0.170.170.170.170.170.17-0.17-0.17--0.17-0.17--0.17-----------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGGCT..................................................................................19220.0051.004.503.001.502.004.00---1.00-2.50------0.50---------0.50--------------0.50---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGGCAA.................................................................................1918.000.00-----12.002.002.00-1.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGGCTA.................................................................................20215.0051.00-3.00-1.501.503.001.001.00-1.00-0.50------0.50-0.50----1.00-0.50------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAATGGTAGAGCACTCGC........................................................................................18910.780.11---------------------------------------0.33---0.22-0.11-----0.110.110.111.110.11--------------------1.00-------0.44-0.220.220.67--0.11------0.330.440.330.110.330.33--0.330.330.11-0.220.220.220.220.22------------------------0.110.110.110.11-0.110.11-0.110.110.110.110.110.110.110.110.110.110.110.110.11
....................................................................................................................................................GGTAGAGCACTGTTTA......................................................................................1628.008.002.503.00-1.001.00---------------------------------------------0.50-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTT.......................................................................................1566.506.501.672.33-1.670.67--------------------------------------------0.17--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTTGG....................................................................................196.000.00------3.003.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTCGG....................................................................................1865.176.50-0.173.50-----0.67---------------------------------------0.17----------------------------------------0.17-----------0.17-----------------------0.17------0.17---------------------------
......................................................................................................................................................TAGAGCACTGTTTAGGCA..................................................................................185.000.00------2.002.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGGCAA.................................................................................2115.00159.00------2.002.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAA.....................................................................................1724.008.001.000.50-1.001.50-----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGTC...................................................................................1824.0051.002.001.50---------------------------------------------------------------------------------------------0.50----------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGA....................................................................................1714.004.00-4.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGA....................................................................................1814.004.00---4.00------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTCG.....................................................................................1764.006.500.670.501.17-----0.83----------------------------------0.17--0.17--------------------------------------0.17--------------------------------0.17--------0.17--------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGGAA..................................................................................2013.00159.00------------3.00---------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTTGG....................................................................................1862.506.50--2.00------------0.50------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTTGGC...................................................................................1962.336.50--1.33-----0.50-----------------------------------------0.17-------------------------------------------------------------------------------0.17----0.17------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTAGGCT..................................................................................2112.001.00----------1.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTCGGC...................................................................................202.000.00------------------1.00---------------------------------------------------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGCTA..................................................................................2011.00159.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTAGGC...................................................................................2011.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGGATA.................................................................................191.000.00---------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGCACTGTTTAGAACTGTGGC............................................................................2111.001.00--------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGTC...................................................................................171.000.00----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTAGGGGT.................................................................................2111.00159.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................ACTATGAAAAGGTGGGGAA................................................................................................................................................................................................1911.001.00----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................AAGGGTTGGGCTGTGCGCC....................................................................................................................................................................191.000.00-------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
..........TGGGATCATATTGGACTACGAGGTCAAATACTA...............................................................................................................................................................................................................3311.001.00----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CTGTGGCCCTGTGAC....................................................................1501.001.00-----------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
...................................AAATACTATGAAAAGCAG.....................................................................................................................................................................................................181.000.00------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................ACATTCCTGGTAAATAAAG..................................................................................................191.000.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.................ATATTGGACTACGAGGTCAAA....................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTTGGC...................................................................................201.000.00-------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
...................................................................AAGGGTTGGGCTGTGGACC....................................................................................................................................................................191.000.00-------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTAG.....................................................................................1811.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................TGGACTACGAGGTCAAATAT.................................................................................................................................................................................................................201.000.00---------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTCG.....................................................................................181.000.00---------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................................................................................GATTTATTGGTAGAGGATGAG.........................................211.000.00-----------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TGGTAGAGCACTGTTTCGGT...................................................................................201.000.00----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTA......................................................................................1550.800.80---0.400.40-----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGGCA..................................................................................1920.5051.00----------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGGAT..................................................................................1920.5051.00----------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GTAGAGCACTGTTTAGGATC.................................................................................2020.5051.00------------------0.50---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTGG.....................................................................................1760.336.500.17----------------------------------------------0.17----------------------------------------------------------------------------------------------------------------
......................................................................................................................................................TAGAGCACTGTTTAGA....................................................................................1630.330.330.33---------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTGGG....................................................................................1860.336.50---------------------------------------------------------------------------------------------------------------------0.17----------------0.17-------------------------
................................................................................................................................................AAATGGTAGAGCACTCG.........................................................................................1790.330.11--------------------------------------------0.11--------------------------------------------------------0.11-----------------------------------------0.11----------------
................................................................................................................................................AAATGGTAGAGCACTCGCT.......................................................................................1990.220.11-------------------------------------------------------------------------------------------------------------0.11----------------------------0.11---------------------
....................................................................................................................................................GGTAGAGCACTGTTTTGT....................................................................................1860.176.50--------------------------------------------------------------------------------------------------------------------0.17-------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTGGA....................................................................................1860.176.50---------------------------------------------0.17------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTGGC....................................................................................1860.176.50---------------------------------------------------------------------------------------------------------------------------------0.17------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTGGGC...................................................................................1960.176.50-------------------------------------------------------------------------------------0.17--------------------------------------------------------------------------
....................................................................................................................................................GGTAGAGCACTGTTTCGTC...................................................................................1960.176.50--------0.17-------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................AAATGGTAGAGCACTCTC........................................................................................1890.110.11----------------------------------------------------------------------------------------------------0.11-----------------------------------------------------------
................................................................................................................................................AAATGGTAGAGCACTCGT........................................................................................1890.110.11-----------------------------------------------------------------------------------------------------------------------------------------0.11----------------------
................................................................................................................................................AAATGGTAGAGCACT...........................................................................................1590.110.11--------------------------------------------------------------------------------------------------------------------------------------------------0.11-------------
................................................................................................................................................AAATGGTAGAGCACTTGT........................................................................................1890.110.11--------------------------------------------------------------------------------------------------0.11-------------------------------------------------------------

Antisense strand
AACATCCTAATGGGATCATATTGGACTACGAGGTCAAATACTATGAAAAGGTGGGGAAACAATGTTTAAGGGTTGGGCTGTGTAGGCAAGAAGCTGTTTCCTCATGAGCTGTGCTCTTGCAAAGAAACCAGTGACATTCCTGGTAAATGGTAGAGCACTGTTTAGAACTGTGGCCCTGTGACCCCTTTGATTTATTGGTAGAGGAAGGTTTAGAAAGAATCTTGTTGAATACCCCCTATTCTACAGCAAT
...............................................................((((.((((...((((.((....))...))))...))))..(((((.((((((.(((......(((((.((...))))))).....))))))))).)))))))))..................................................................................
..............................................................63........................................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR343337SRR343336SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR343335SRR343334SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR189785SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040011(GSM532896)
G529T. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR040029(GSM532914)
G026T. (cervix)		SRR040039(GSM532924)
G531T. (cervix)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR191432(GSM715542)
169genomic small RNA (size selected RNA from . (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040031(GSM532916)
G013T. (cervix)		SRR040018(GSM532903)
G701N. (cervix)		SRR040006(GSM532891)
G601N. (cervix)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR040024(GSM532909)
G613N. (cervix)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040040(GSM532925)
G612N. (cervix)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR040033(GSM532918)
G603T. (cervix)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029124(GSM416753)
HeLa. (hela)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR040015(GSM532900)
G623T. (cervix)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR040019(GSM532904)
G701T. (cervix)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040037(GSM532922)
G243T. (cervix)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038863(GSM458546)
MM603. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532885(GSM532885)
G850N. (cervix)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR040010(GSM532895)
G529N. (cervix)		SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR040023(GSM532908)
G575T. (cervix)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR444069(SRX128917)
Sample 26cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR040022(GSM532907)
G575N. (cervix)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040017(GSM532902)
G645T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		SRR029130(GSM416759)
DLD2. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191401(GSM715511)
38genomic small RNA (size selected RNA from t. (breast)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR040027(GSM532912)
G220T. (cervix)
....................................................................................................................................................GGTAGAGCACTGTTTCCC.................................................................................... 1861.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................TTGCAAAGAAACCAGTAT.................................................................................................................... 181.000.00-----------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................TTCCTGGTAAATGGTCCTG............................................................................................... 191.000.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------------