ID: uc003dpm.1_intron_8_0_chr3_74350957_r.3p
GENE: CNTN3(13)
chr3:74350907-74351156-


(12)
BRAIN 		(4)
BREAST 		(4)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(3)
LIVER 		(5)
SKIN

Sense strand
CTAACAACAGAAATGCGGGGAGGGAGAGTAGAGGGAAGTAGTTGTTCTATTACCAGGTAAATGGCCTTTTCCCTAAGTGCTTCTGAAATTGGGAAAAGTCAGAGATATTGAAGTGGTCATGTGACATTCTCTTCTCTTTGATAGGAGAGGATGACATTTATGGAACTGCTACTCAATGTTTCCATTTGTGCCTTCCTTAGGTTCACCTGGACCACCAGAAAATGTGAAGGTAGATGAAATTACAGACACA
.............................................................................................................................................((((..(((...(((...((((((..((........)))))))).))).)))..))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR390723(GSM850202)
total small RNA. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
.................................................................................................................................................AGAGGATGACATTTATGGAACT...................................................................................221103.00103.0023.0016.0010.0010.007.006.007.007.006.004.001.00--2.00------1.00------1.001.001.00-
................................................................................................................................................GAGAGGATGACATTTATGGAACT...................................................................................23111.0011.003.004.001.001.00-1.00----1.00--------------------
...................................................................................................................................................................................TTCCATTTGTGCCTTCCTTAGT.................................................224.000.00---------------1.001.00-1.00-------1.00----
.................................................................................................................................................AGAGGATGACATTTATGGAACTA..................................................................................2313.00103.001.001.00----1.00------------------------
.................................................................................................................................................AGAGGATGACATTTATGGAACTAT.................................................................................2412.00103.00----1.001.00-------------------------
........................................................................................................................................................................................................................AGAAAATGTGAAGGTAGATGA.............2112.002.00-----------2.00-------------------
..................................................................................................................................................GAGGATGACATTTATGGAACT...................................................................................2112.002.00-1.00--------1.00--------------------
.................................................................................................................................................AGAGGATGACATTTATGGAAAT...................................................................................222.000.001.001.00-----------------------------
.................................................................................................................................................AGAGGATGACATTTATGGAACTT..................................................................................2312.00103.00--1.001.00---------------------------
.................................................................................................................................................AGAGGATGACATTTATGGGACT...................................................................................221.000.00--1.00----------------------------
.................................................................................................................................................AGAGGATGACATTTATGGAAATTC.................................................................................241.000.00---------1.00---------------------
.................................................................................................................................................AGAGGATGACATTTATGGACCA...................................................................................221.000.00--1.00----------------------------
................................................................................................AGTCAGAGATATTGAAGTTGTT....................................................................................................................................221.000.00-------------------------1.00-----
...............................................................................................................................................................................................................................GTGAAGGTAGATGAACCG.........181.000.00-----1.00-------------------------
.............................................................................................................................................TAGGAGAGGATGACACTAT..........................................................................................191.000.00-----------------1.00-------------
.................................................................................................................................................AGAGGATGACATTTATGGAACTAA.................................................................................2411.00103.00----1.00--------------------------
.................................................................................................................................................AGAGGATGACATTTATGGAATTG..................................................................................231.000.00--------------1.00----------------
...................................................................................................................................................................................TTCCATTTGTGCCTTCCTTATT.................................................221.000.00----------------------1.00--------
.................................................................................................................................TCTTCTCTTTGATAGTGA.......................................................................................................181.000.00-----------------------1.00-------
................................................................................................................................................GAGAGGATGACATTTATGGAATG...................................................................................2311.001.00----------1.00--------------------
.................................................................................................................................................AGAGGATGACATTTATGGAGGC...................................................................................221.000.00------------1.00------------------
................................................................................................................................................GAGAGGATGACATTTATGGAA.....................................................................................2111.001.00------------1.00------------------
.................................................................................................................................................AGAGGATGACATTTATGGTTTT...................................................................................221.000.00-1.00-----------------------------
..........................AGTAGAGGGAAGTAGTTG..............................................................................................................................................................................................................1811.001.00-----------1.00-------------------
.........................................................................................................................................................................................................TTCACCTGGACCACCA.................................1660.170.17------------------------------0.17

Antisense strand
CTAACAACAGAAATGCGGGGAGGGAGAGTAGAGGGAAGTAGTTGTTCTATTACCAGGTAAATGGCCTTTTCCCTAAGTGCTTCTGAAATTGGGAAAAGTCAGAGATATTGAAGTGGTCATGTGACATTCTCTTCTCTTTGATAGGAGAGGATGACATTTATGGAACTGCTACTCAATGTTTCCATTTGTGCCTTCCTTAGGTTCACCTGGACCACCAGAAAATGTGAAGGTAGATGAAATTACAGACACA
.............................................................................................................................................((((..(((...(((...((((((..((........)))))))).))).)))..))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormGSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR390723(GSM850202)
total small RNA. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
...........................................................................................................................................................................................................................AAATGTGAAGGTAGAACC............. 181.000.00-------------------1.00-----------
.................GGGAGGGAGAGTAGAGTGGT..................................................................................................................................................................................................................... 201.000.00------------------------1.00------
............................................................................................................................................................................................................................AATGTGAAGGTAGATGGTCT.......... 201.000.00---------------------1.00---------