ID: uc003dno.2_intron_3_0_chr3_69105435_r
GENE: (14)
chr3:69105385-69105812-


(2)
AGO2.ip 		(1)
AGO3.ip 		(6)
B-CELL 		(6)
BRAIN 		(10)
BREAST 		(21)
CELL-LINE 		(6)
CERVIX 		(5)
HEART 		(3)
HELA 		(5)
LIVER 		(1)
OTHER 		(1)
OTHER.ip 		(1)
RRP40.ip 		(27)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TTAATGATGTAGATGGGCTGTATACATACACATTTGAAGCAGAAAGAAAGGTTAGTAGTATTAAGAACACATTTTTGATCATGCATATTTTGATTTTTAAATATTATTGGTTAGAAATTTGAACAAAGTCACCCATACATTTTCTAACTTCCAGAACTCTACTTATTATATATCTTTTGCTTTATAGCCTGAAATAACTCTATAGCGAAGTAATTTACAAGAAATGGTCTATTATGAAAAGCAGGCTTTAAAGCATAAAAATTTTTTTATAGGAAATATGCATGATTATAAAACAACCTGATTTTTATTTTATTGTTCATAAAAGAGACTAATATTGGTGCATGTGCTGCTGTAATTTGTTGTGTATTATGTGTGTAGGAAAACTGCCCAGCTTGTAGCCAGCTTCCTCAAAATATTCAGTTTTCTCC
........................................................................................................................................................................................................................................................................................(((((.((((.(((((..............(((((.((........)).)))))..(((((....)).))).....))))).))))))))).........................................................
........................................................................................................................................................................................................................................................................................281..............................................................................................378................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189787SRR189786SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR029128(GSM416757)
H520. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR040018(GSM532903)
G701N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040029(GSM532914)
G026T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040033(GSM532918)
G603T. (cervix)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343334SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAAGT..........................................................................................................................21157.001.005.0013.009.00---4.00--1.00-----3.003.00-2.001.002.00-1.00--1.00-------------------1.00-1.00--1.001.00-------1.00-1.00------1.001.00---1.001.00---1.00-------1.00-----------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAAG...........................................................................................................................20129.001.0024.00-----1.00------------1.00---------------------1.00---------------------1.00------1.00---------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGAAAAG...........................................................................................................................209.000.008.001.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAA............................................................................................................................1916.001.005.00----1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAAGC..........................................................................................................................2115.001.00-5.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTAGTT.........................................................................................................................224.000.001.00----------------1.00------------------------------------------------------------------1.00-----1.00-------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTAGTG.........................................................................................................................224.000.004.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAAGA..........................................................................................................................2114.001.00-1.00---------1.00-----------1.00-------------------------------------------------------------1.00------------
........GTAGATGGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................2413.003.00-----2.00------------------------------------------1.00-------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTAGGAAAACTGCCC.......................................2113.003.00------------------------1.00-----------------1.00----------------------1.00--------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................TGTATTATGTGTGTAGGAAAACTGCCC.......................................2713.003.00--------1.00----------------------------1.00---------------------------------------------1.00--------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGACAAG...........................................................................................................................202.000.00-1.00----------1.00-------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................TATTATGTGTGTAGGAAAACTGCCC.......................................2512.002.00--------2.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATGAG...........................................................................................................................2012.001.001.00---------------------1.00---------------------------------------------------------------------------
........GTAGATGGGCTGTATACA..................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00---1.00---1.00------------------------------------------------------------------------------------------
......ATGTAGATGGGCTGTATAC...................................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00---2.00----------------------------------------------------------------------------------------------
.............TGGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................1912.002.00---------1.00----------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTAGT..........................................................................................................................212.000.002.00-------------------------------------------------------------------------------------------------
..AATGATGTAGATGGGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00---2.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................ATTTGTTGTGTATTATGTG.......................................................1912.002.00----2.00---------------------------------------------------------------------------------------------
..........AGATGGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................2212.002.00-------1.00----------------1.00-------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGAAAA............................................................................................................................192.000.001.00----------------------------------------------------------------------1.00--------------------------
..........AGATGGGCTGTATACATACACATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2512.002.00-----1.00---------------------------------------------------------------------------------1.00----------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGAACAG...........................................................................................................................202.000.002.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTAG...........................................................................................................................202.000.002.00-------------------------------------------------------------------------------------------------
..........AGATGGGCTGTATACATACAC.............................................................................................................................................................................................................................................................................................................................................................................................................2112.002.00--------------1.00-------------------1.00---------------------------------------------------------------
.................................................................................................................................................................................................................................................CAGGCTTTAAAGCATAAAAATTTTTTATAG.............................................................................................................................................................301.000.00-----------------------------------1.00--------------------------------------------------------------
.......TGTAGATGGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-----------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTAGGAAAACTGCCC.......................................2011.001.00-----------------------------------------------------------------------------------------1.00--------
.....................................................................................................................TTTGAACAAAGTCACCCATACATTTTCT...........................................................................................................................................................................................................................................................................................2811.001.00----1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTAA...........................................................................................................................201.000.00-----------------------------------------------------------------------------1.00--------------------
........GTAGATGGGCTGTATACATACACATT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------------------------------------------------------1.00-----------------
.......TGTAGATGGGCTGTATACA..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------1.00------------------------------------------------------------------------------------
......ATGTAGATGGGCTGTATACATACA..............................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------------------------------------------1.00----------------------
......ATGTAGATGGGCTGTA......................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00-------1.00------------------------------------------------------------------------------------------
............ATGGGCTGTATACATACACATTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................GAGACTAATATTGGTGCATGTGCT................................................................................2411.001.00--------------------------------------------------------------1.00-----------------------------------
.........TAGATGGGCTGTATACATACATTT...........................................................................................................................................................................................................................................................................................................................................................................................................241.000.00-------------------------------------------------------------------------------1.00------------------
.......TGTAGATGGGCTGTATACATACAC.............................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------------------------------1.00-------------------------------------------
.....GATGTAGATGGGCTGTATA....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------1.00----------------------------------------------------------------------------
...ATGATGTAGATGGGCTGTATACATAC...............................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---1.00----------------------------------------------------------------------------------------------
.........TAGATGGGCTGTATACATACACAT...........................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------------------------------1.00---------------------------------------------------------
..............GGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------1.00----------------------------------------------------------------------------------------
...ATGATGTAGATGGGCTGTATACATACACATTTG........................................................................................................................................................................................................................................................................................................................................................................................................3311.001.00-------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGAACTCTACTTATTATA..................................................................................................................................................................................................................................................................1911.001.00--------------1.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................TGTGTAGGAAAACTGCCC.......................................1811.001.00----------------------------------------------------1.00---------------------------------------------
..........AGATGGGCTGTATACATAC...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------------1.00----------------------------------------------------------------------
................................................................................................TTAAATATTATTGGTTATATA.......................................................................................................................................................................................................................................................................................................................211.000.00-------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................................................................................................................TTTTTATTTTATTGTTCGGG...........................................................................................................201.000.00------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGTTT.............................................................................................................................181.000.001.00-------------------------------------------------------------------------------------------------
....TGATGTAGATGGGCTGTA......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------1.00---------------------------------------
.........TAGATGGGCTGTATAC...................................................................................................................................................................................................................................................................................................................................................................................................................1611.001.00---------------------1.00----------------------------------------------------------------------------
.......TGTAGATGGGCTGTATACATACACATT..........................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------1.00---------------
.........................................................................................................................................CATTTTCTAACTTCCAG..................................................................................................................................................................................................................................................................................1761.001.00------------0.17---------------------------------------------------------------------------------0.50-0.33-
..................................................................................................................................................................TTATTATATATCTTTCTGG.......................................................................................................................................................................................................................................................191.000.00-----------1.00--------------------------------------------------------------------------------------
............ATGGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAACT..........................................................................................................................2111.001.00-----------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGTAGCCAGCTTCCTC...................2011.001.00--------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGACTAG...........................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTAGTA.........................................................................................................................221.000.001.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGAT..............................................................................................................................1711.001.001.00-------------------------------------------------------------------------------------------------
............ATGGGCTGTATACATACACATTTG........................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00----1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CAGGCTTTAAAGCATAAAAATTTT...................................................................................................................................................................2411.001.00-----------1.00--------------------------------------------------------------------------------------
..............GGGCTGTATACATACACATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATCAA...........................................................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGGTAA............................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTATTT.........................................................................................................................221.000.001.00-------------------------------------------------------------------------------------------------
........................................................................................................................................ACATTTTCTAACTTCCAGAAC...............................................................................................................................................................................................................................................................................2111.001.00-----1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CAGGCTTTAAAGCATAAAAATTTTTTTATAG............................................................................................................................................................3111.001.00---------------------------------------------------------------------------------1.00----------------
..........AGATGGGCTGTATACATACACATTTGAAGCAGA.................................................................................................................................................................................................................................................................................................................................................................................................3311.001.00-------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGTTAA............................................................................................................................191.000.001.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................CTGCCCAGCTTGTAGCC............................1711.001.00-------------------------------1.00------------------------------------------------------------------
..............GGGCTGTATACATACACATT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATACA...........................................................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................AAATAACTCTATAGCGAAGTAATTTACAAGAAA............................................................................................................................................................................................................3311.001.00-----------------------1.00--------------------------------------------------------------------------
............ATGGGCTGTATACATACAC.............................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------1.00-----------------------------------------
.........TAGATGGGCTGTATACATACACATT..........................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------------------1.00---------------------------------------------------
....TGATGTAGATGGGCTGTATAC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------1.00------------------------------------------------------------------------
..................TGTATACATACACATTTGAAGCAGAAAGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................3211.001.00-----------------------------1.00--------------------------------------------------------------------
............ATGGGCTGTATACATACACATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00----1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................CATACATTTTCTAACTTCCAGAA................................................................................................................................................................................................................................................................................2311.001.00----1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGAATAG...........................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATAAT...........................................................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------
.......TGTAGATGGGCTGTATACATAC...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGAGAAG...........................................................................................................................201.000.00------------1.00-------------------------------------------------------------------------------------
.........TAGATGGGCTGTATACATACAC.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00--------------------------------------------1.00-----------------------------------------------------
.......TGTAGATGGGCTGTATACATACACATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00----1.00---------------------------------------------------------------------------------------------
.........TAGATGGGCTGTATACATACACA............................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00-------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGATTATTG.........................................................................................................................221.000.00----------------------------------------------------------------------------1.00---------------------
...........GATGGGCTGTATACATACACATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----1.00--------------------------------------------------------------------------------------------
........GTAGATGGGCTGTATACATACACAT...........................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00------------------------------1.00-------------------------------------------------------------------
....TGATGTAGATGGGCTGTATACA..................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------1.00---------------------------------
........................................................................................................................................ACATTTTCTAACTTCCTTT.................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------------------------1.00------
..........AGATGGGCTGTATACATA................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................................................................................................TTATAAAACAACCTGTTA.............................................................................................................................181.000.001.00-------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................CAGGCTTTAAAGCATAAAAATTTTTTTACAGG...........................................................................................................................................................321.000.00-----------1.00--------------------------------------------------------------------------------------
..........................................AAAGAAAGGTTAGTAGTATTAAGAACA.......................................................................................................................................................................................................................................................................................................................................................................2711.001.00-------------------------------------------------------------------1.00------------------------------
......ATGTAGATGGGCTGTATACATACACATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00----1.00---------------------------------------------------------------------------------------------
...............................................................................................................TAGAAATTTGAACAAAGT...........................................................................................................................................................................................................................................................................................................1820.500.50-----------------------------------------------------------------------------------------------0.50--
............ATGGGCTGTATACATACA..............................................................................................................................................................................................................................................................................................................................................................................................................1820.500.50--------------------------0.50-----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................GTAGGAAAACTGCCC.......................................1560.170.17-------------------------------------------------------------------------------------------------0.17

Antisense strand
TTAATGATGTAGATGGGCTGTATACATACACATTTGAAGCAGAAAGAAAGGTTAGTAGTATTAAGAACACATTTTTGATCATGCATATTTTGATTTTTAAATATTATTGGTTAGAAATTTGAACAAAGTCACCCATACATTTTCTAACTTCCAGAACTCTACTTATTATATATCTTTTGCTTTATAGCCTGAAATAACTCTATAGCGAAGTAATTTACAAGAAATGGTCTATTATGAAAAGCAGGCTTTAAAGCATAAAAATTTTTTTATAGGAAATATGCATGATTATAAAACAACCTGATTTTTATTTTATTGTTCATAAAAGAGACTAATATTGGTGCATGTGCTGCTGTAATTTGTTGTGTATTATGTGTGTAGGAAAACTGCCCAGCTTGTAGCCAGCTTCCTCAAAATATTCAGTTTTCTCC
........................................................................................................................................................................................................................................................................................(((((.((((.(((((..............(((((.((........)).)))))..(((((....)).))).....))))).))))))))).........................................................
........................................................................................................................................................................................................................................................................................281..............................................................................................378................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189787SRR189786SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR029128(GSM416757)
H520. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR040018(GSM532903)
G701N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040028(GSM532913)
G026N. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040029(GSM532914)
G026T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191611(GSM715721)
57genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR038858(GSM458541)
MEL202. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105751AGO4(GSM1105751)
small RNA sequencing data. (ago4 hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040033(GSM532918)
G603T. (cervix)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		TAX577579(Rovira)
total RNA. (breast)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343334SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTCCTCAAAATAGC........... 181.000.00---------------------------------------1.00----------------------------------------------------------
.................................................................................................................................................................................................................................................................................AAATATGCATGATTATATG........................................................................................................................................ 191.000.00------------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................GTAGGAAAACTGCCCGATT................................... 1961.000.00--------------------------------------------------------------------------------------------1.00-----
..................................................................................................................................................................................................................................................................................................................................................TGCATGTGCTGCTGTAGAGC...................................................................... 201.000.00-1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGAGGAAGCTGGC.............. 1720.500.50---------------------------------------------------------------------------------------------0.50----