ID: uc003dmi.1_intron_0_0_chr3_64547445_f.5p
GENE: AK125532(1)
chr3:64547395-64547644+


(2)
AGO2.ip 		(13)
B-CELL 		(3)
BRAIN 		(3)
BREAST 		(14)
CELL-LINE 		(2)
CERVIX 		(3)
HEART 		(1)
HELA 		(3)
LIVER 		(1)
OTHER 		(9)
SKIN 		(2)
UTERUS

Sense strand
CTGCTGTACGCCTCGGCCACAGGACACAGAGCACTAAGAAGACAGAGAACGTAAGTGGGAGCTTCGGCTCATTTATTTTTTGGGGGGGCGGGGGGTGTCGAGGGTCACAGAGGAGGGGAATGCACTCCTAATCCAATGACTTTCATAGCTATCACATCGCTTTCTAATTTGCAATGAAAGGGATCCTAGATCATGTCTTAAACCTGGAAACTCACTGCTTATCTTATCCACGCTGGAGAGTGAGGAAGGT
..................................................((((((..((((....))))............((..(((((.((.(((.((((((((..((..(((((......)))))..))...))))))))))).))......)))))..)).))))))..............................................................................
..................................................51................................................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189784SRR343336SRR189782SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR343334SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR343337SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR343335SRR189786SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
...................................................TAAGTGGGAGCTTCGGCGCCA..................................................................................................................................................................................2172.000.0058.008.00-6.00-----------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGCCA..................................................................................................................................................................................1971.000.0059.004.00----3.002.00----1.00--------1.00----------------------------1.00------------
...................................................TAAGTGGGAGCTTCGGCGCCG..................................................................................................................................................................................2120.000.007.0011.00-1.00--1.00--------------------------------------------------------
....................................................AAGTGGGAGCTTCGGCGCCA..................................................................................................................................................................................2018.000.0015.00--------2.00-----------------------------------------------1.00-----
...................................................TAAGTGGGAGCTTCGGCG.....................................................................................................................................................................................1815.000.002.00----2.00---2.00---3.00------------1.00----1.00-----------1.001.00-------1.00------1.00---
...................................................TAAGTGGGAGCTTCGGCGC....................................................................................................................................................................................1910.000.004.00----------1.00-----1.00--1.00-----------------1.001.00--1.00--------------------
...................................................TAAGTGGGAGCTTCGGCGCC...................................................................................................................................................................................2010.000.007.00--1.00------------------1.00------------1.00---------------------------
.....................................................AGTGGGAGCTTCGGCGCCG..................................................................................................................................................................................199.000.005.001.00-----2.00---------------------------------1.00---------------------
.....................................................AGTGGGAGCTTCGGCGCC...................................................................................................................................................................................188.000.007.00-------------1.00------------------------------------------------
...................................................TAAGTGGGAGCTTCGGCGA....................................................................................................................................................................................198.000.00----5.003.00---------------------------------------------------------
....................................................AAGTGGGAGCTTCGGCGC....................................................................................................................................................................................187.000.00----------4.00----1.00-------------------------------1.00------1.00--------
....................................................AAGTGGGAGCTTCGGCG.....................................................................................................................................................................................177.000.00--1.00-4.00-2.00--------------------------------------------------------
....................................................AAGTGGGAGCTTCGGCGCCG..................................................................................................................................................................................206.000.004.00--1.00-----------------------------1.00-----------------------------
....................................................AAGTGGGAGCTTCGGCA.....................................................................................................................................................................................176.000.00--4.00-----1.00---------------1.00--------------------------------------
.....................................................AGTGGGAGCTTCGGCGC....................................................................................................................................................................................175.000.001.00----------2.00---1.00--------------------1.00--------------------------
....................................................AAGTGGGAGCTTCGGCAA....................................................................................................................................................................................185.000.00--3.00-----------1.00---------------------------------------------1.00--
....................................................AAGTGGGAGCTTCGG.......................................................................................................................................................................................1524.004.00--1.50-----0.50-----0.50---------0.501.00-------------------------------------
...................................................TAAGTGGGAGCTTCGGCGCAA..................................................................................................................................................................................214.000.00-1.00-1.00-2.00---------------------------------------------------------
....................................................AAGTGGGAGCTTCGGCGCC...................................................................................................................................................................................194.000.002.00-1.00-----1.00------------------------------------------------------
...................................................TAAGTGGGAGCTTCGG.......................................................................................................................................................................................1613.003.00------------------1.00----1.00------------------------1.00--------------
.....................................................AGTGGGAGCTTCGGCG.....................................................................................................................................................................................163.000.00--1.00-----1.00-----------1.00------------------------------------------
.....................................................AGTGGGAGCTTCGGCGTCA..................................................................................................................................................................................192.000.002.00--------------------------------------------------------------
.......................................................TGGGAGCTTCGGCTCCAGT................................................................................................................................................................................192.000.002.00--------------------------------------------------------------
......................................................GTGGGAGCTTCGGCTCCA..................................................................................................................................................................................182.000.00-1.00--------------------------------------------------------1.00----
.....................................................AGTGGGAGCTTCGGCGCGA..................................................................................................................................................................................192.000.00-1.00-------------------1.00-----------------------------------------
.....................................................AGTGGGAGCTTCGGCTCCA..................................................................................................................................................................................192.000.002.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGAA...................................................................................................................................................................................182.000.00----------------2.00----------------------------------------------
.....................................................AGTGGGAGCTTCGGCCAGT..................................................................................................................................................................................192.000.001.001.00-------------------------------------------------------------
...................................................TAAGTGGGAGCTTCGGCGT....................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCAA....................................................................................................................................................................................171.000.00--------1.00------------------------------------------------------
...................................................TAAGTGGGAGCTTCGGCTCTGG.................................................................................................................................................................................221.000.00-1.00-------------------------------------------------------------
...................................................TAAGTGGGAGCTTCGGCTCC...................................................................................................................................................................................201.000.001.00--------------------------------------------------------------
.......ACGCCTCGGCCACAGGACA................................................................................................................................................................................................................................1911.001.00-------------------1.00-------------------------------------------
.....................................................AGTGGGAGCTTCGGCATCG..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
...................................................TAAGTGGGAGCTTCGGCGTTG..................................................................................................................................................................................211.000.00---1.00-----------------------------------------------------------
....................................................AAGTGGGAGCTTCGGGCCA...................................................................................................................................................................................1921.004.001.00--------------------------------------------------------------
............................................................................TTTTTGGGGGGGCGGGGGC...........................................................................................................................................................191.000.00------------1.00--------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGACA..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
......................GACACAGAGCACTAAGAAGACAGAGAAC........................................................................................................................................................................................................2811.001.00-----------------------1.00---------------------------------------
...................................................TAAGTGGGAGCTTCGGCGCCC..................................................................................................................................................................................211.000.001.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCACCA..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
..........................................................................ATTTTTTGGGGGGGCGGGGGC...........................................................................................................................................................211.000.00------------1.00--------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGCAA..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGCCC..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
...............................................................................................................................................................CTTTCTAATTTGCAAGTCA........................................................................191.000.00-------------------------------------------------1.00-------------
.....................................................AGTGGGAGCTTCGGCTCCGG.................................................................................................................................................................................201.000.00-------------------------------------1.00-------------------------
...................................................TAAGTGGGAGCTTCGGCGCTA..................................................................................................................................................................................211.000.00-------1.00-------------------------------------------------------
........................................................................................................TCACAGAGGAGGGGAATCCTT.............................................................................................................................211.000.00----------------------------------1.00----------------------------
....................................................AAGTGGGAGCTTCGGCCCCA..................................................................................................................................................................................201.000.00----------------------1.00----------------------------------------
................................................................................TGGGGGGGCGGGGGGTGTGGT.....................................................................................................................................................211.000.00-------------------1.00-------------------------------------------
......................................................GTGGGAGCTTCGGCTCG...................................................................................................................................................................................171.000.00-----------------------------1.00---------------------------------
..................................................GTAAGTGGGAGCTTCGGCGCCA..................................................................................................................................................................................221.000.001.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGCA...................................................................................................................................................................................181.000.00------------------------------1.00--------------------------------
....................................................AAGTGGGAGCTTCGGCAACA..................................................................................................................................................................................201.000.00-----------------1.00---------------------------------------------
...............................................................................TTGGGGGGGCGGGGGCGGA........................................................................................................................................................191.000.00---------------------------------------------1.00-----------------
....................................................AAGTGGGAGCTTCGGCGAC...................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
....................................AGAAGACAGAGAACGAGAT...................................................................................................................................................................................................191.000.00--------------------------------------------------------1.00------
.....................................................AGTGGGAGCTTCGGCAAA...................................................................................................................................................................................181.000.00---------------------------1.00-----------------------------------
...................................................TAAGTGGGAGCTTCGGTCA....................................................................................................................................................................................1911.003.00-1.00-------------------------------------------------------------
.........................................................................................................................................................................................................................................TGGAGAGTGAGGAAGGTGTT201.000.00-------------------------------------------------------------1.00-
................................ACTAAGAAGACAGAGAACGTAAAA..................................................................................................................................................................................................241.000.00-------------------------------------------------------1.00-------
...................................................TAAGTGGGAGCTTCGGCGAA...................................................................................................................................................................................201.000.00-----1.00---------------------------------------------------------
....................................................AAGTGGGAGCTTCGGCTCCA..................................................................................................................................................................................201.000.001.00--------------------------------------------------------------
...........................................................................................................................................................................................................................................GAGAGTGAGGAAGGTAGAA191.000.00------------------1.00--------------------------------------------
...................................................TAAGTGGGAGCTTCGGCATCG..................................................................................................................................................................................211.000.001.00--------------------------------------------------------------
...................................................TAAGTGGGAGCTTCGGCCCCA..................................................................................................................................................................................211.000.001.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCGA....................................................................................................................................................................................171.000.00-----1.00---------------------------------------------------------
................................................................................TGGGGGGGCGGGGGGTGTGGG.....................................................................................................................................................211.000.00-----------------------------------------------------1.00---------
....................................................AAGTGGGAGCTTCGGCAAAA..................................................................................................................................................................................201.000.00----------------------------------------------1.00----------------
.....................................................AGTGGGAGCTTCGGCGCTA..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
.....................................................AGTGGGAGCTTCGGCAACA..................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
...................................................TAAGTGGGAGCTTCGTGTC....................................................................................................................................................................................1930.670.33-------0.67-------------------------------------------------------
...................................................TAAGTGGGAGCTTCG........................................................................................................................................................................................1530.330.33-------------------------0.33-------------------------------------

Antisense strand
CTGCTGTACGCCTCGGCCACAGGACACAGAGCACTAAGAAGACAGAGAACGTAAGTGGGAGCTTCGGCTCATTTATTTTTTGGGGGGGCGGGGGGTGTCGAGGGTCACAGAGGAGGGGAATGCACTCCTAATCCAATGACTTTCATAGCTATCACATCGCTTTCTAATTTGCAATGAAAGGGATCCTAGATCATGTCTTAAACCTGGAAACTCACTGCTTATCTTATCCACGCTGGAGAGTGAGGAAGGT
..................................................((((((..((((....))))............((..(((((.((.(((.((((((((..((..(((((......)))))..))...))))))))))).))......)))))..)).))))))..............................................................................
..................................................51................................................................................................................................181...................................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR189784SRR343336SRR189782SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR343334SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR343337SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR189787SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR343335SRR189786SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
......................................................................................................................................................................................................................CCAGCGTGGATAAGATAAGCAG.............. 2211.001.00----------------------------------------1.00----------------------
.........TGTGTCCTGTGGCCGAGGC.............................................................................................................................................................................................................................. 1911.001.00--------------------------------------------------------------1.00
.......................................................................................................................GAAAGTCATTGGATTAGGAGTGCAT.......................................................................................................... 2511.001.00----------------------------1.00----------------------------------
......................................................................................................................................................ATCACATCGCTTTCTAATGTT............................................................................... 211.000.00---------------------------------------------------1.00-----------
........................................................................................................................................................................................................................................CTGGAGAGTGAGGAAGG. 171.000.00--------------------------------1.00------------------------------