ID: uc003dju.3_intron_0_0_chr3_58292145_f.5p
GENE: (1)
chr3:58292095-58292344+


(2)
AGO2.ip 		(10)
B-CELL 		(1)
BRAIN 		(12)
BREAST 		(30)
CELL-LINE 		(4)
CERVIX 		(6)
HEART 		(6)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(3)
OTHER 		(29)
SKIN 		(1)
XRN.ip

Sense strand
GCGGCGAATAGGAGTCTGGTCAGGCGTCAGGCTAGTCCGACGAAGAGTGGGTAGGTGGAAGCCTTCCAAAGAGCGGCGGTTGTCTGGGAGCCGTCTCAGTTGGCCGCGACCCGGGCGCATGCGCGGGGCGGGCGGTGCGCCTTGGGTAGCTTGTCCTCTCCGACCCCGGGCGCTGAGGGCCTCTGTACGGCGCCGCGTAGGGTCTCGGCCGCAGAACGTGGCCGAGAGGCCCGGGCGAGACTTCGGGACC
.......................................................................................................................(((((((.((((((...((((((.((((...............)))).)))))).....)))).......)).)))))))...................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191514(GSM715624)
165genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191535(GSM715645)
181genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
.....................................................................................................................................................................................................................GAACGTGGCCGAGAGGCCCGGGC..............23117.0017.00--8.00-----5.00----2.00--------------------1.00-----------------------------1.00----------------------------------------------
.....................................................................................................................................................................................................................GAACGTGGCCGAGAGGC....................17111.0011.008.00-----2.001.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................AGGGCCTCTGTACGGCGC.........................................................1817.007.00-----2.00-------------------------------------------1.00-----------------1.00------1.00-----------------1.00--1.00---------------
...................................................................................................................................................................................................................CAGAACGTGGCCGAGAGGCCCGGGCGAG...........2815.005.00-5.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCGCTGAGGGCCTCTGTACGG............................................................2115.005.00---------------------------------1.00-----------------1.00--1.00--1.00----------------------------------------------1.00------
.............................................................................................................................GGGCGGGCGGTGCGCCGC...........................................................................................................1824.000.50---------1.00-----1.00---1.00----------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................................................CGCCGCGTAGGGTCTCGG..........................................1814.004.00------1.00----------2.00---------------------------------------------1.00-----------------------------------------------
.........................................................................................................................................................................................................GTCTCGGCCGCAGAACGTGG.............................2014.004.00---3.00-----------------------------------------1.00-----------------------------------------------------------------
................................................................................................................................................................................................CCGCGTAGGGTCTCGGCCG.......................................1913.003.003.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AACGTGGCCGAGAGGCCCGGGC..............2213.003.00----2.00--------------------------------1.00-------------------------------------------------------------------------
.............................................................................................................................GGGCGGGCGGTGCGCCG............................................................................................................1723.000.50---------1.00--------1.00---1.00----------------------------------------------------------------------------------------
...........................................................................................................................................................................................CGGCGCCGCGTAGGGTCTCGGC.........................................2213.003.00---2.00----------------------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................GGGCGCTGAGGGCCTCTGTACGGCG..........................................................2513.003.00-----------2.00---------------1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................ACGTGGCCGAGAGGCCCGGGC..............2113.003.00----2.00------------------------------------------------------------------------------------------------------1.00---
....................................................................................................................................................................................................................AGAACGTGGCCGAGAGGC....................1813.003.00----------1.00-----------------------------1.00-1.00--------------------------------------------------------------------
........................................................................................................................................................................................................................CGTGGCCGAGAGGCCCGGGC..............2013.003.00----1.00--------2.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CCGGGCGAGACTTCGGGA..1813.003.00------------------1.00--1.00----------------------------------1.00------------------------------------------------------
..................................................................................................................................................................ACCCCGGGCGCTGAGGGC......................................................................1812.002.00-----1.00-----------------------------------------------------------1.00---------------------------------------------
....................................................................................................................................................................................................GTAGGGTCTCGGCCGCAGAA..................................2012.002.001.00--------------------------------------------------------------------------------------------1.00-----------------
.........................................................................................................................................................................GCGCTGAGGGCCTCTGTAC..............................................................1912.002.00--------------1.00--------------------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................GGGCGCTGAGGGCCTCTGTAC..............................................................2112.002.00---1.00-------------------------------------------------------------------------------------------------1.00---------
......................................................................................................................................................................................................AGGGTCTCGGCCGCAGAAC.................................1912.002.00----------1.00-------------------------------------1.00--------------------------------------------------------------
.............................................................................................................................GGGCGGGCGGTGCGCCGCG..........................................................................................................1922.000.50-------------------1.00---------------------------------------------------------1.00---------------------------------
...........................................................................................................................................................................GCTGAGGGCCTCTGTACGG............................................................1912.002.00------------------------------------------------------------1.00---------------------------------------1.00----------
...............................................................................................................................................................................................GCCGCGTAGGGTCTCGG..........................................1712.002.00-------2.00-------------------------------------------------------------------------------------------------------
..............................................................................................................................GGCGGGCGGTGCGCCG............................................................................................................1622.000.50----------------------1.00--------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................CGGCGCCGCGTAGGGTCTCGGCC........................................2312.002.00-------------------------------1.00-1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................CGCGTAGGGTCTCGGCCGC......................................1912.002.00--------------------------------------1.00--------1.00---------------------------------------------------------------
.CGGCGAATAGGAGTCTGGT......................................................................................................................................................................................................................................1912.002.002.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................GAGGGCCTCTGTACGGC...........................................................1712.002.00-------------------------1.00-------------------------------------------------------------------------------1.00-----
...............................................................................................................................................................................AGGGCCTCTGTACGGCGCC........................................................1912.002.00---------------------------------------2.00-----------------------------------------------------------------------
.......................................................................................................................................................................GGGCGCTGAGGGCCTCTGTACGGC...........................................................2412.002.00--------------------------------------------------------------------------------1.00-----------------1.00------------
..........................................................................................................................................................................................................................TGGCCGAGAGGCCCGGGCGAGACTT.......2512.002.00----------1.00-------------------------------------------------------------------------------------------1.00--------
.....................................................................................................................................................................................................................GAACGTGGCCGAGAGGCCCGG................2112.002.00----------------------------------1.00----------------------------------------------------------------1.00-----------
...........................................................................................................................................................................................CGGCGCCGCGTAGGGTCTCG...........................................2012.002.00------------1.00------------------------------------------------------------------1.00-------------------------------
........................................................................................................................................................................................................GGTCTCGGCCGCAGA...................................1531.331.33------------------------------------------------------------------------------------------1.00-----------------0.33--
.....................................................................................................................................................................................................TAGGGTCTCGGCCGCAGAACG................................2111.001.00-----------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................................................................................CTGTACGGCGCCGCGTAGGGTCTCGGC.........................................2711.001.00-----------------------------1.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................GCCGCGTAGGGTCTCGGC.........................................1811.001.00-----------------------------------------------------------------------1.00---------------------------------------
.......................................................................................................................................................................GGGCGCTGAGGGCCTCTGT................................................................1911.001.00----------------------------------------------1.00----------------------------------------------------------------
...................TCAGGCGTCAGGCTAGTCCGACGAAGAGCGGG.......................................................................................................................................................................................................3211.001.00--------------------------------1.00------------------------------------------------------------------------------
.......................................................................................................................................................................GGGCGCTGAGGGCCTCTGTA...............................................................2011.001.00-------------------------------------------------------------------------------------------1.00-------------------
...........................................................................................................................................................................................................CTCGGCCGCAGAACGTG..............................1711.001.00--------------------------------------------------------------1.00------------------------------------------------
.........................................................................................................................................................................GCGCTGAGGGCCTCTGTACG.............................................................2011.001.00--------------------------------------------------1.00------------------------------------------------------------
........................................................................................................................................................................................................................CGTGGCCGAGAGGCCCGGGCGAGACTTCGGGA..3211.001.00----------1.00----------------------------------------------------------------------------------------------------
....................................................................................................TGGCCGCGACCCGGG.......................................................................................................................................1511.001.00------------------------1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................AGGGCCTCTGTACGGCGCCGCG.....................................................2211.001.00------------------------------1.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................TGTACGGCGCCGCGTAGGGTCTCGG..........................................2511.001.00-------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................GCGTAGGGTCTCGGCCGC......................................1811.001.00---------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CTCGGCCGCAGAACGT...............................1611.001.00-------------------------------------------------------------------------------------------------1.00-------------
....................................................................................................................................................................................................................AGAACGTGGCCGAGAGGCCCGGGC..............2411.001.00-1.00-------------------------------------------------------------------------------------------------------------
.........................GTCAGGCTAGTCCGACGAAGAGTGGGTGT....................................................................................................................................................................................................291.000.00-1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................GGGGCGGGCGGTGCGCCGC...........................................................................................................191.000.00---------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCGTAGGGTCTCGGCCGCAGAACG................................2411.001.00-------1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................GCCGCGTAGGGTCTCGGCCGCAGAAC.................................2611.001.00------------------------1.00--------------------------------------------------------------------------------------
...........................................................................................................................................................................GCTGAGGGCCTCTGTACGGCGCCGCG.....................................................2611.001.00------------------------------------------------------------------------------------1.00--------------------------
.......................................................................AGCGGCGGTTGTCTGGGTAG...............................................................................................................................................................201.000.00----------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................GCGAGACTTCGGGAC.1511.001.00---------------------------------------------------------------------1.00-----------------------------------------
........TAGGAGTCTGGTCAGGC.................................................................................................................................................................................................................................1711.001.00------------------------------------1.00--------------------------------------------------------------------------
...........................................................................................CGTCTCAGTTGGCCGCGACCCGGG.......................................................................................................................................2411.001.00---1.00-----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCGCTGAGGGCCTCTGTACGGC...........................................................2211.001.00-----------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCAGAACGTGGCCGAG........................1611.001.00----------------------------------------1.00----------------------------------------------------------------------
...........................................................................................................................................................................................CGGCGCCGCGTAGGG................................................1511.001.00-----------------------------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................CGTAGGGTCTCGGCCGC......................................1711.001.00-------------------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................................................AGAACGTGGCCGAGAGG.....................1711.001.00----------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................GCCTCTGTACGGCGCCGCGTAGG.................................................2311.001.00--------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................CTGAGGGCCTCTGTACGG............................................................1811.001.00------------------------------------------------------------------------------1.00--------------------------------
................................................................................................................................................................................................CCGCGTAGGGTCTCGGCCGCAG....................................2211.001.00-----1.00---------------------------------------------------------------------------------------------------------
.CGGCGAATAGGAGTCTGGTCAGGCG................................................................................................................................................................................................................................2511.001.00-----------1.00---------------------------------------------------------------------------------------------------
.....................AGGCGTCAGGCTAGTCCGACGAAGAGTGGG.......................................................................................................................................................................................................3011.001.00--------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................CCCGGGCGCTGAGGGCCTCTGTACGGCGCCGC......................................................3211.001.00-------------------------------------------------------------------------1.00-------------------------------------
......................................................................................................................................................................................................................AACGTGGCCGAGAGGC....................1611.001.00-------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GTACGGCGCCGCGTAGGGTCTCGGCC........................................2611.001.00------------------------------------------------------------------------1.00--------------------------------------
.................................................................................................................................................................................................CGCGTAGGGTCTCGGCCGCAGAACGTG..............................2711.001.00--------------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................CTGTACGGCGCCGCGTAGGG................................................2011.001.00----------------------------------------------------1.00----------------------------------------------------------
....................................................................................................TGGCCGCGACCCGGGCCA....................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................................................................................................CAGAACGTGGCCGAGAGGCC...................2011.001.00------------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................TGAGGGCCTCTGTACGGC...........................................................1811.001.00--------------------1.00------------------------------------------------------------------------------------------
............................................................................................................................GGGGCGGGCGGTGCGCCGG...........................................................................................................191.000.00---------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GCGTAGGGTCTCGGCCGCAGAACGT...............................2511.001.00------1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CGGCGCCGCGTAGGGTCTCGG..........................................2111.001.00------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TCTGTACGGCGCCGC......................................................1511.001.00--------------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GCTGAGGGCCTCTGTACGGC...........................................................2011.001.00----------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCAGAACGTGGCCGAGAG......................1811.001.00-----1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CGCCGCGTAGGGTCTCGGCCGCAGAACGTG..............................3011.001.00----------------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................................................................TACGGCGCCGCGTAGGGTCTC............................................2111.001.00----------------------------------------------------------------------------------------------------------1.00----
....................................................................................................................................................................................CTCTGTACGGCGCCGCGTAGGG................................................2211.001.00--------------------------------------------------------------------------------------1.00------------------------
........................................................................................................................................................................................GTACGGCGCCGCGTAGGGTCTCGGC.........................................2511.001.00-----------------------1.00---------------------------------------------------------------------------------------
..........................................................................................................................................................................CGCTGAGGGCCTCTGTACGG............................................................2011.001.00-------------------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGGCCGAGAGGCCCGGGA..............181.000.00---------------------------------------------------------------------------------------1.00-----------------------
...........................................................................................................................CGGGGCGGGCGGTGCGGGGA...........................................................................................................201.000.00-----------------------------------1.00---------------------------------------------------------------------------
..............................................................................................................................................................................GAGGGCCTCTGTACGGCG..........................................................1811.001.00---------------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................ACGGCGCCGCGTAGGGTCT.............................................1911.001.00-----1.00---------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GAGGCCCGGGCGAGACTTCGG....2111.001.00----------------------------------------------------------1.00----------------------------------------------------
........................................................................................................................................................................................................................CGTGGCCGAGAGGCCAAG................181.000.00----------------------------------------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................GCGCCGCGTAGGGTCTCGGCCGCAGAACGTGGC............................3311.001.00---1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................GCAGAACGTGGCCGAGAGG.....................1911.001.00---------------------------------------------------------------------------------1.00-----------------------------
...............................................................................................................................................................................AGGGCCTCTGTACGGCGCCGCGTAGGGT...............................................2811.001.00--------------------------------------------1.00------------------------------------------------------------------
...................TCAGGCGTCAGGCTAGTCCGACGAAGAG...........................................................................................................................................................................................................2811.001.00----------------------------------------------------------------------------------------1.00----------------------
.........................................................................................................................................................................................................................................GGCGAGACTTCGGGACC1711.001.00-----------------------------------------------------------------------------------------1.00---------------------
..........................................................................................................................................................................................ACGGCGCCGCGTAGGGTCTCGG..........................................2211.001.00-------------------------------------------------------1.00-------------------------------------------------------
.................................................................................................................................................................................................CGCGTAGGGTCTCGGCCGCAGAAC.................................2411.001.00---------------------------------------------------------------------------1.00-----------------------------------
.............................................................................................TCTCAGTTGGCCGCGACCCGG........................................................................................................................................2111.001.00--------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................................................................AGAGGCCCGGGCGAGACT........1811.001.00------------------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................................GCTGAGGGCCTCTGTACGT............................................................191.000.00-----------------------------------------1.00---------------------------------------------------------------------
...............................................................................................................................................................................AGGGCCTCTGTACGGCGCCGCGTAGG.................................................2611.001.00-----------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................GGGTCTCGGCCGCAGAAC.................................1811.001.00------------------------------------------1.00--------------------------------------------------------------------
..............................................................................................................................GGCGGGCGGTGCGCCGC...........................................................................................................1721.000.50--------------------------------------------------------------------1.00------------------------------------------
.......................................................................................................................................................................................................................ACGTGGCCGAGAGGCCCGGGCGAGA..........2511.001.00----1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................TAGGGTCTCGGCCGC......................................1511.001.00------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................GGCCGCGACCCGGGCCCT...................................................................................................................................181.000.00---------1.00-----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGGCCCGGGCGAGACTTCGGGA..2211.001.00-------------------------------------1.00-------------------------------------------------------------------------
....................................................................................................................................................................................................GTAGGGTCTCGGCCGCAGAACGT...............................2311.001.00----------------------------------------------------------------------1.00----------------------------------------
...................................................................................................................................................................................................CGTAGGGTCTCGGCCGCAGAACG................................2311.001.00-----------------------------------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................GTAGGGTCTCGGCCGCAGAACGTGG.............................2511.001.00--------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................GGGCGGGCGGTGCGCGGC...........................................................................................................181.000.00---------------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................................GACCCCGGGCGCTGAGGGCCTCTGTACGGCGC.........................................................3211.001.00-----------------------1.00---------------------------------------------------------------------------------------
..............................................................................................................................GGCGGGCGGTGCGCC.............................................................................................................1520.500.50--------------------------------------------0.50------------------------------------------------------------------
.............................................................................................................................GGGCGGGCGGTGCGCC.............................................................................................................1620.500.50-------------------0.50-------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GGTCTCGGCCGCAGAA..................................1630.330.33-------------------------------------------------------------------------------------------------------------0.33-
.........................................................................................................................CGCGGGGCGGGCGGT..................................................................................................................1560.170.17--------------------------------------------------------------------------------------------------------------0.17

Antisense strand
GCGGCGAATAGGAGTCTGGTCAGGCGTCAGGCTAGTCCGACGAAGAGTGGGTAGGTGGAAGCCTTCCAAAGAGCGGCGGTTGTCTGGGAGCCGTCTCAGTTGGCCGCGACCCGGGCGCATGCGCGGGGCGGGCGGTGCGCCTTGGGTAGCTTGTCCTCTCCGACCCCGGGCGCTGAGGGCCTCTGTACGGCGCCGCGTAGGGTCTCGGCCGCAGAACGTGGCCGAGAGGCCCGGGCGAGACTTCGGGACC
.......................................................................................................................(((((((.((((((...((((((.((((...............)))).)))))).....)))).......)).)))))))...................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR029124(GSM416753)
HeLa. (hela)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR189782SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191396(GSM715506)
29genomic small RNA (size selected RNA from t. (breast)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191514(GSM715624)
165genomic small RNA (size selected RNA from . (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR029129(GSM416758)
SW480. (cell line)		SRR040016(GSM532901)
G645N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191535(GSM715645)
181genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR189786SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)		SRR038863(GSM458546)
MM603. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
...........................................................CAGACAACCGCCGCTCTTTGGAAGGCT.................................................................................................................................................................... 2713.003.00-3.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCGCTGAGGGCCTCTAGTG.............................................................. 192.000.00-------------------------------------------------------------1.00----------------------------------1.00--------------
...............................................................................................................................................................CCGACCCCGGGCGCTCG.......................................................................... 171.000.00------------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................CCGCGACCCGGGCGCG................................................................................................................................... 161.000.00----------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................GCTTGTCCTCTCCGACATCG.................................................................................. 201.000.00----------------------------1.00----------------------------------------------------------------------------------
.........................................................................................GGTCGCGGCCAACTGAGACGGC........................................................................................................................................... 2211.001.00----------------------------------------------------------------------------------------------1.00----------------
..............................................................................GTTGTCTGGGAGCCGTGAC......................................................................................................................................................... 191.000.00-----------------1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................CCGACCCCGGGCGCTCGG......................................................................... 181.000.00-----------------------------------1.00---------------------------------------------------------------------------
...............................................................................................................................................................CCGACCCCGGGCGCTCGTC........................................................................ 191.000.00------------------------------1.00--------------------------------------------------------------------------------
...........................................................................CGGCTCCCAGACAACCGC............................................................................................................................................................. 1811.001.00------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CCCTCAGCGCCCGGGG....................................................................... 1620.500.50---------------------------------------------0.50-----------------------------------------------------------------