ID: uc003dap.6
GENE: CACNA2D2(31)
chr3:50403545-50403747-


(3)
B-CELL 		(11)
BRAIN 		(4)
BREAST 		(3)
CELL-LINE 		(3)
CERVIX 		(7)
HEART 		(1)
LIVER 		(2)
OTHER 		(10)
SKIN 		(1)
TESTES

Sense strand
ATGATGGAGGATTCCTGGTGCTGTCAAACCAGAACCATCAGTGGGACCAGGTGAGGATCAGGAAGAGAGTGAAAGAAGAGAGTAGGGATTTGAGCCTTCTAGGGGTGTAGCACTGCCAGCCCTGTGACCATGGCTTTCTCCTGACATCCTCAGGTGGGCAGGTTCTTCAGTGAGGTGGATGCCAACCTGATGCTGGCACTCTA
....................................................((((.(((((..........................))))).))))..((((.((((....)).)).))))................................................................................
..................................................51......................................................................123..............................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040036(GSM532921)
G243N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
..................................................GTGAGGATCAGGAAGAGAGTGA...................................................................................................................................22172.0072.0021.006.004.007.003.003.002.003.003.003.00-2.001.001.001.001.001.00----1.00--1.00-1.00----1.00-1.001.001.00-1.00-1.00--1.00--
..................................................GTGAGGATCAGGAAGAGAGT.....................................................................................................................................20136.0036.008.005.005.00-2.003.002.002.002.001.00-1.001.001.00--1.00-1.00-------------1.00------------
..................................................GTGAGGATCAGGAAGAGAGTG....................................................................................................................................21119.0019.003.003.002.003.00----1.001.004.00---1.00--------1.00---------------------
..................................................GTGAGGATCAGGAAGAGAG......................................................................................................................................19110.0010.004.004.00----1.00------------------1.00-------------------
..................................................GTGAGGATCAGGAAGAGAGTGAA..................................................................................................................................2319.009.001.001.002.002.00--1.00-----1.00----------------1.00---------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGA...............................................................................................................................2616.006.003.001.00---------------2.00---------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGA............................................................................................................................2916.006.004.002.00-------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAG.............................................................................................................................2816.006.002.003.00------------------------------------1.00------
..................................................GTGAGGATCAGGAAGAGA.......................................................................................................................................1845.255.253.000.750.25-------0.250.250.25-----0.25------------------------0.25-
..................................................GTGAGGATCAGGAAGAGAGA.....................................................................................................................................2015.0010.003.00-----1.001.00-------------------------------------
..................................................GTGAGGATCAGGAAGAGAGGGA...................................................................................................................................2215.0010.00--2.00-1.00-1.00--1.00-----------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGT...................................................................................................................................2214.0019.00--1.001.001.00----------1.00-----------------------------
..................................................GTGAGGATCAGGAAGAG........................................................................................................................................1741.751.750.750.50-0.25-------0.25---------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAG................................................................................................................................2511.001.00----1.00----------------------------------------
......GAGGATTCCTGGTGCTGTCAAATC.............................................................................................................................................................................241.000.00--------------------1.00------------------------
..................................................GTGAGGATCAGGAAGAGAGTA....................................................................................................................................2111.0036.00--------1.00------------------------------------
..................................................GTGAGGATCAGGAAGAGAGTAAG..................................................................................................................................2311.0036.00-----1.00---------------------------------------
....................................................................................................AGGGGTGTAGCACTGCTGC....................................................................................191.000.00----------------------1.00----------------------
..................................................GTGAGGATCAGGAAGAGACTGA...................................................................................................................................2241.005.25--1.00------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGAGAA..................................................................................................................................2311.0010.00-------1.00-------------------------------------
................................................................................................................CTGCCAGCCCTGTGACAC.........................................................................181.000.00------------------------------1.00--------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGAGA..........................................................................................................................3111.001.001.00--------------------------------------------
.......................................................................................................................................................................................AACCTGATGCTGGCACT...1711.001.00-------------1.00-------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGAGAGT........................................................................................................................3311.001.00-1.00-------------------------------------------
..................................................GTGAGGATCAGGAAGTGA.......................................................................................................................................181.000.00-------1.00-------------------------------------
....................................................................................................AGGGGTGTAGCACTGCATC....................................................................................191.000.00--------------1.00------------------------------
...................................................TGAGGATCAGGAAGAGAGTGAAAGAAGAG...........................................................................................................................2911.001.001.00--------------------------------------------
....................................................................................................................................GCTTTCTCCTGACATCCTCA...................................................2011.001.00---------1.00-----------------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGT...............................................................................................................................2611.001.001.00--------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGAA....................................................................................................................................2111.0010.00--1.00------------------------------------------
..................................................GTGAGGATCAGGAAGAGAGCGA...................................................................................................................................2211.0010.00--1.00------------------------------------------
...................................................TGAGGATCAGGAAGAGAGTGA...................................................................................................................................2111.001.00----1.00----------------------------------------
..................................................GTGAGGATCAGGAAGAGAGG.....................................................................................................................................2011.0010.00-----1.00---------------------------------------
.................................................................................................TCTAGGGGTGTAGCACTCTG......................................................................................201.000.00-------------------1.00-------------------------
..................................................GTGAGGATCAGGAAGAGAGTGAAAGAAGAG...........................................................................................................................3011.001.00-1.00-------------------------------------------
..................................................GTGAGGATCAGGAAGA.........................................................................................................................................1660.670.670.170.50-------------------------------------------
.....................................................AGGATCAGGAAGAGAGT.....................................................................................................................................1720.500.500.50--------------------------------------------
..................................................GTGAGGATCAGGAAGACA.......................................................................................................................................1860.170.67-0.17-------------------------------------------
..................................................GTGAGGATCAGGAAGATAG......................................................................................................................................1960.170.670.17--------------------------------------------
..................................................GTGAGGATCAGGAAGAAAA......................................................................................................................................1960.170.67--------------------------------------------0.17

Antisense strand
ATGATGGAGGATTCCTGGTGCTGTCAAACCAGAACCATCAGTGGGACCAGGTGAGGATCAGGAAGAGAGTGAAAGAAGAGAGTAGGGATTTGAGCCTTCTAGGGGTGTAGCACTGCCAGCCCTGTGACCATGGCTTTCTCCTGACATCCTCAGGTGGGCAGGTTCTTCAGTGAGGTGGATGCCAACCTGATGCTGGCACTCTA
....................................................((((.(((((..........................))))).))))..((((.((((....)).)).))))................................................................................
..................................................51......................................................................123..............................................................................
SizePerfect hitTotal NormPerfect NormSRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040036(GSM532921)
G243N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR040011(GSM532896)
G529T. (cervix)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		TAX577741(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................GCACTGCCAGCCCTGATGG........................................................................... 191.000.00------------------------------------1.00--------
.....................................................................................................................................................................................CCAACCTGATGCTGGCTCCG.. 201.000.00--1.00------------------------------------------
.....................................................................TGAAAGAAGAGAGTAATG.................................................................................................................... 181.000.00---------------------------1.00-----------------
..............................................................................................................GTCACAGGGCTGGCAGTG........................................................................... 1811.001.00----------------------------------------1.00----
.............................................................................................................GCACTGCCAGCCCTGCATG........................................................................... 191.000.00----------------------------1.00----------------
..................................................................................................................................................GAAGAACCTGCCCACCTGAGGA................................... 2211.001.00-----------------------------------------1.00---