ID: uc003cxr.2
GENE: UBA7(21)
chr3:49843549-49843798-


(1)
AGO1.ip OTHER.mut
(1)
AGO2.ip
(9)
B-CELL
(2)
BRAIN
(35)
BREAST
(15)
CELL-LINE
(14)
CERVIX
(2)
FIBROBLAST
(8)
HEART
(1)
KIDNEY
(5)
LIVER
(2)
OTHER
(45)
SKIN

Sense strand
CCCCATTTCCTGTGCTGGCCCCGGCCTGGACGGGGAGGGGGCTGAGACTCTGGGCCCAGATCCCACCTCCCCCCCACCCCCCACCCCCTGGCTCCTGTTTCCTGCTAGTCCAGCTCTTCCCCTAGGAAAGGCTGCTGGTAACTGGGATGGGGGTTGGGGGGAGGTAAGAAGTCTCTGACTCCTCCTCTACCTCATCCCAGTTCCATCACCTGAAGTGGACCTCTTGGGACCGTCTGAAGGTACCAGCTGG
...............................................................................................................................................(((((((((...((((((((...(((....)))..))))))))...)))))))))....................................................
...............................................................................................................................................144.....................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040015(GSM532900)
G623T. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577590(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040010(GSM532895)
G529N. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR040023(GSM532908)
G575T. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191503(GSM715613)
10genomic small RNA (size selected RNA from t. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191518(GSM715628)
83genomic small RNA (size selected RNA from t. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR191520(GSM715630)
89genomic small RNA (size selected RNA from t. (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGT.................................................22146.0046.001.001.001.002.00-1.002.00-2.002.001.00-1.001.00-2.001.00--1.001.001.001.001.00-1.001.00-1.00--1.00-------1.001.00--1.00-2.00---1.00----1.001.00--------1.00-----1.00-------1.00----------------------1.00---1.00-1.00------------------1.00--1.001.00----1.001.00-------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTT...............................................22115.0013.00-------2.00------2.00--1.00---------1.00-1.002.00---------------------1.00----1.00-------------------------------1.00----------1.00-------1.00---1.00-------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGTTTT..............................................22114.001.00---1.00-4.00-----------1.00-----1.00---1.00----1.00-----1.00----1.00--------------1.00-----------------------------------1.00---------------------------1.00---------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTT................................................21113.0013.002.00------1.00-----1.00--------1.00-----------------1.00-----2.00----------1.00--2.00----------------------------------1.00--------------1.00---------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGA.................................................22112.008.003.00-1.00---------------1.00------------------1.00------1.00-----------1.00---------------1.00-------------------------1.00-------1.00---------------------------------1.00---
....................................................................................................................................................................................CCTCCTCTACCTCATCCCATTT................................................22111.002.00---1.00--------1.00-------1.00----1.001.00----1.00-----1.00------------------------1.00----1.00-------------1.00---------------------------------1.00----------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAG..................................................2118.008.00-1.00---------------------------1.001.00--1.00------------------------1.001.00-----------1.00----1.00-------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGTT................................................2217.007.001.00-------------1.00------1.00---1.00-----------------------------------1.00--------------------1.00----------------------------------------------------------1.00--
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTA...............................................2214.0013.00-1.00-------------------------------------1.00--------------------------------------------1.00-------------------------------1.00---------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGATT...............................................224.000.001.00-1.00---------------------------------------------------------------------------------------------------------------------1.00-------1.00---------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCATT.................................................2114.002.00-1.00-----------------1.00----1.00---1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGTTCT..............................................2213.001.00---------------2.00----1.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGTT................................................2313.003.00------1.00------------------------------------------1.00-----1.00----------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGA.................................................203.000.001.00--------------------1.00-------------------------------------------------------------------------------------------------1.00------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGTA................................................2313.0046.00--1.00--------------------------1.00--------------------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................................GGGGGTTGGGGGGAGGCTCT..................................................................................203.000.00----------------------------------2.00--------------------------------------------------1.00----------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGAT................................................212.000.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCA...................................................1912.002.00---------------------------------------------------1.00-------1.00------------------------------------------------------------------------------------
.......................GCCTGGACGGGGAGGGGGCTGAGACT.........................................................................................................................................................................................................2612.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCA...................................................2012.002.00----------------1.00----------------------------------------------------------------------------------------------1.00--------------------------------
.......................GCCTGGACGGGGAGGGGGCTGAGA...........................................................................................................................................................................................................2412.002.00----2.00-------------------------------------------------------------------------------------------------------------------------------------------
........................CCTGGACGGGGAGGGGGC................................................................................................................................................................................................................1812.002.00-----------1.00-----------------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGA.................................................212.000.00------------1.00---1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGATGGGGGTTGGGGGGAGTT.....................................................................................242.000.00--------------------------------------------------2.00---------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGGATGGGGGTTGGGGGGA........................................................................................2112.002.00------------------1.00-------1.00---------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCATT.................................................2212.002.00----------------------1.00----------------------------------------------------------------------------------------------1.00--------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGAAG...............................................212.000.00----------2.00-------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGTTCCA.............................................2312.002.00---------------------------------------------------1.00----------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGT.................................................2112.002.00----------------------------------------------------------------1.00------------------------------------------------------------------------1.00------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCATTTT...............................................222.000.00------2.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCCTCCTCTACCTCATCCCAGTT................................................2412.002.00-------------------------------------------------------------------------------------------------------------1.00-------------1.00--------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGT.................................................2021.501.50--------0.50----------------------------------------------------------0.50---------------------------------------------------------------------------0.50
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCCGA.................................................221.000.00------------------------------------------------------------------------------------------1.00-----------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTCT..............................................2311.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTTAG.............................................2411.0013.00--------------------------------------------------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGAAT...............................................211.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AACTGGGATGGGGGTTGGA............................................................................................191.000.00----------------1.00-------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACTGGGATGGGGGTTGGGGGGATT......................................................................................2411.001.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCATAT................................................2211.002.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATAGCG...................................................201.000.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCATA.................................................2211.002.00-------------------------------------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCCGTT................................................211.000.00------------------------------------------------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGAAAA..............................................231.000.00--------------------------------------------------------------------------------1.00---------------------------------------------------------------
..........................TGGACGGGGAGGGGGCTGAG............................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------------------------------------------1.00-----------
...................................................................................................................................................................................TCCTCCTCTACCTCATCC.....................................................1811.001.00------------------------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CTCTACCTCATCCCAGCCGT..............................................201.000.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------
..................................................................................................................................................ATGGGGGTTGGGGGGAAAA.....................................................................................191.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGGATA..............................................231.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGG.................................................2211.008.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGTTGGGGGGAGGCTT...................................................................................181.000.00------------------------------------1.00-----------------------------------------------------------------------------------------------------------
........................CCTGGACGGGGAGGGGGCT...............................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAAT.................................................2211.002.00----------1.00-------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................CTCCTCCTCTACCTCAGC......................................................181.000.00----------------------------------------------------------------------------------------------------------------------------1.00-------------------
.......................GCCTGGACGGGGAGGGGGCTGAGACTC........................................................................................................................................................................................................2711.001.00----------------------------------------------------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCCTTT................................................221.000.00------------1.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGAGT...............................................221.000.00-------------------------------------------------------------------------------------------------------------------------------------1.00----------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCCGA.................................................201.000.00--------------------------------------1.00---------------------------------------------------------------------------------------------------------
...................CCCGGCCTGGACGGGGAGGGGGCTGAG............................................................................................................................................................................................................2711.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGTA................................................2211.002.00-----------------------1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCATT.................................................201.000.00-------------------------------------------------------------------------------------------1.00----------------------------------------------------
.......................................................................................................................................................................GAAGTCTCTGACTCCTCCTCTACC...........................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------------------------------------------
.......................GCCTGGACGGGGAGGGGGCTGAGACTCT.......................................................................................................................................................................................................2811.001.00--------------------------------------------1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTTT..............................................2311.0013.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGTT................................................2011.001.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGAA................................................211.000.00---------------------------------------------------------------------------------------------------1.00--------------------------------------------
............................................................................................................................................ACTGGGATGGGGGTTGGGGGGATTT.....................................................................................2511.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTTTT.............................................2411.0013.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................GAGGGGGCTGAGACTCTGG.....................................................................................................................................................................................................1911.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGTTT...............................................2111.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGACA...............................................221.000.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------
.................................................................................................................................................................................................................CTGAAGTGGACCTCTTGGGAC....................2111.001.00--------------------------------------------------------------------------------------------1.00---------------------------------------------------
.....................CGGCCTGGACGGGGAGCGG..................................................................................................................................................................................................................191.000.00-----------------------------------------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................ACTGGGATGGGGGTTGGGGGGA........................................................................................2211.001.00-------------------------------------------------------------------------------------------------------------------------1.00----------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTC...............................................2211.001.00-------------------------------------------------------------------------------------------------1.00----------------------------------------------
....................................................................................................................................................GGGGGTTGGGGGGAGGCAAT..................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------1.00------------------------------
............................................................................................................................................ACTGGGATGGGGGTTGGGGGGGG.......................................................................................231.000.00-------------------------------------------------------------------------------------------------------------------------------------------1.00----
......................................................................................................................................................................................TCCTCTACCTCATCCCAGAT................................................201.000.00---------------------------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTAA..............................................2311.0013.00------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGACT...............................................221.000.00-----------------------------------------------------------------------------1.00------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGAATT..............................................221.000.00------------------------------------------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGACC...............................................231.000.00----------------------------1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCATTT................................................211.000.00-------------------------------------------------------------------------------------------------------------------------------1.00----------------
.........................CTGGACGGGGAGGGGGCTGAGA...........................................................................................................................................................................................................2211.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
........................CCTGGACGGGGAGGGGGCTGAGA...........................................................................................................................................................................................................2311.001.00----1.00-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TCCTCTACCTCATCCCAGATTT..............................................221.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGTTT...............................................2311.007.00------------------------------------------------------------------------------------------------------------------------------------------1.00-----
......................................................................................................................................................................................TCCTCTACCTCATCCCAGTTC...............................................2111.001.00-------1.00----------------------------------------------------------------------------------------------------------------------------------------
.................................................................CCTCCCCCCCACCCCCCAAC.....................................................................................................................................................................201.000.00---------------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCCG..................................................211.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGACT...............................................231.000.00------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGAAA...............................................221.000.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGAT................................................221.000.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGAA................................................221.000.00-------------------------------------------------------------------------1.00----------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCCGT.................................................221.000.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACTGGGATGGGGGTTGGGGGGAT.......................................................................................2311.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------
.......................GCCTGGACGGGGAGGGGGCTGA.............................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------------1.00---------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTGT...............................................2220.501.50----------------------------------------------------------------------------------------------------------------------------------------------0.50-
...............................................................................................TGTTTCCTGCTAGTCC...........................................................................................................................................1620.500.50-------------------------------0.50----------------------------------------------------------------------------------------------------------------
............................................................................................................................................ACTGGGATGGGGGTTGGG............................................................................................1830.330.33--------------------------------0.33---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CCTCTACCTCATCCCAG..................................................1740.250.25---------------------------------0.25--------------------------------------------------------------------------------------------------------------

Antisense strand
CCCCATTTCCTGTGCTGGCCCCGGCCTGGACGGGGAGGGGGCTGAGACTCTGGGCCCAGATCCCACCTCCCCCCCACCCCCCACCCCCTGGCTCCTGTTTCCTGCTAGTCCAGCTCTTCCCCTAGGAAAGGCTGCTGGTAACTGGGATGGGGGTTGGGGGGAGGTAAGAAGTCTCTGACTCCTCCTCTACCTCATCCCAGTTCCATCACCTGAAGTGGACCTCTTGGGACCGTCTGAAGGTACCAGCTGG
...............................................................................................................................................(((((((((...((((((((...(((....)))..))))))))...)))))))))....................................................
...............................................................................................................................................144.....................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR040015(GSM532900)
G623T. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040011(GSM532896)
G529T. (cervix)
TAX577741(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
TAX577590(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040010(GSM532895)
G529N. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR191482(GSM715592)
5genomic small RNA (size selected RNA from to. (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR040023(GSM532908)
G575T. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040031(GSM532916)
G013T. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191503(GSM715613)
10genomic small RNA (size selected RNA from t. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR040022(GSM532907)
G575N. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191518(GSM715628)
83genomic small RNA (size selected RNA from t. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR191521(GSM715631)
92genomic small RNA (size selected RNA from t. (breast)
SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR191520(GSM715630)
89genomic small RNA (size selected RNA from t. (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
...............................................CTCTGGGCCCAGATCCTGA........................................................................................................................................................................................ 192.000.00-----------------------------------------2.00------------------------------------------------------------------------------------------------------
................................GGGAGGGGGCTGAGACTG........................................................................................................................................................................................................ 182.000.00--------------------------------------------------------------------------1.00----------------------------1.00----------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGTT................................................ 2312.000.00---------1.00-----------------------------------------------------------------------------1.00--------------------------------------------------------
.................................................................................................................................................................................CTGGGATGAGGTAGAGGAGGAGT.................................................. 2312.002.00------------------------------------------------------------------1.00-1.00---------------------------------------------------------------------------
.........................................................................................GGACTAGCAGGAAACAGGAGCC........................................................................................................................................... 2211.001.00------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................TCTGACTCCTCCTCTCCAC.......................................................... 191.000.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------
..................................CCCAGAGTCTCAGCCCCCTC.................................................................................................................................................................................................... 2011.001.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTTTA............................................. 2411.000.00----------------------------------------------------------------------------------------1.00-------------------------------------------------------
....................................................................................................................................................................................CCTCCTCTACCTCATCCCAGTTTT.............................................. 2411.000.00------------------------------------------------------------------------------------------------------1.00-----------------------------------------
.....................................................................................................................................................................................GAACTGGGATGAGGTAGAGGAG............................................... 2211.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................ACTGGGATGAGGTAGAGGAGGA................................................. 2211.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00---------
.............................................................CCCACCTCCCCCCCAGTAT.......................................................................................................................................................................... 191.000.00-------------1.00----------------------------------------------------------------------------------------------------------------------------------
.........................................................................CCACCCCCCACCCCCTATA.............................................................................................................................................................. 191.000.00---------------------------------------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGTAA............................................... 2411.000.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------
..........................................................................CACCCCCCACCCCCTTAGT............................................................................................................................................................. 191.000.00---------------------------------------------------------------------------------------------1.00--------------------------------------------------
............................................................................................................TCCAGCTCTTCCCCTAGCT........................................................................................................................... 191.000.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................ACTGGGATGAGGTAGAGGAG................................................. 2021.001.00------------------------------------------------------------------0.50-0.50---------------------------------------------------------------------------
................................................................ACCTCCCCCCCACCCCTTT....................................................................................................................................................................... 191.000.00-------------------------------------------------------------------------------1.00----------------------------------------------------------------
....................................................................................................................................................................................................TTCAGGTGATGGAACTGG.................................... 1811.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00------------
..........................................................................CACCCCCCACCCCCTCTCT............................................................................................................................................................. 191.000.00------------------------------------------------1.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCCTCCTCTACCTCATCCCAGT................................................. 2211.000.00-----------------------------------------------------1.00------------------------------------------------------------------------------------------
.....................CGGCCTGGACGGGGACCA................................................................................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------------------------------------------------------1.00------------------
.....................................................................................................................................................................................CTCCTCTACCTCATCCCAGTTCA.............................................. 2311.000.00------------------------------------------------------------------------------------------------1.00-----------------------------------------------