ID: uc003cua.1_intron_9_0_chr3_48642214_r.3p
GENE: (1)
chr3:48642164-48642413-


(2)
AGO2.ip 		(4)
B-CELL 		(5)
BRAIN 		(4)
BREAST 		(19)
CELL-LINE 		(3)
CERVIX 		(7)
HEART 		(3)
HELA 		(9)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(44)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
TTGGCGCATGATGCCATGGTTTTGGTCACCTCAAGGCCTGCTTAGTGCTTGGTAAACAGACTCTGGGATCTGTGTCCCCAGAGTCTATGCTGAGGGAGGTACCTGTGGACCAGTGGTCCTGCTGGGTGTTTAGCCTCTGAGGACAGGGTTCTTGGGTTCCTGTGTAGCTCCTGATTGTTCTGGTTGATATCTGGTTCCAGGGAACAAAGAATCGGCCTGGCAGTGCCCTGGAGAAGGAGGTGGAGAGCAT
.......................................................................(((((.((((((((...((((.((((...(((((.(((((....(((((...((((.....))))...)))))..))))).)))))))))...))))....)))...)))))..)))))(((....)))..................................................
......................................................................71...............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189782SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040023(GSM532908)
G575T. (cervix)
...........................................................................CCCCAGAGTCTATGCTGAGGGAG........................................................................................................................................................23189.0089.0012.009.00-8.00-6.00-4.00---4.00-3.004.004.00--2.001.00--3.00-1.00-1.00--1.001.00---1.00--2.00-2.001.00-2.00--1.00-1.00--1.00-1.001.00---1.001.00--1.00-1.001.00--1.00-1.00-1.00----------1.00---1.00--1.001.00------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGG...................................1714.004.00---------1.00--3.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCC.................................1914.004.00---------1.00-------------------------------------------------------------------------1.00----1.00-----1.00--------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCT................................1914.004.00----------1.00------2.00-------------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCCTGGCA............................2413.003.00------1.00------------------------------------1.00----1.00------------------------------------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCTGGCAGT..........................2513.003.00----------------------------------------------2.00-------------------------------------1.00------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGA.........................................................................................................................................................2213.003.00-------------1.00----1.00----------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................................................AGAAGGAGGTGGAGAGCA.1813.003.00-----------------------3.00-------------------------------------------------------------------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAGG.......................................................................................................................................................2413.003.00-1.00-1.00---------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAGAATCGGCCTGGCAG...........................1813.003.00------------------------------------1.00------------------1.00-----------------1.00-----------------------------
.........................................................................GTCCCCAGAGTCTATGCTGAGGGAGT.......................................................................................................................................................263.000.00--------------------3.00----------------------------------------------------------------------------------
..................................................................................GTCTATGCTGAGGGAG........................................................................................................................................................1613.003.00--2.00-----------------------------------------------------------1.00----------------------------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAGGT......................................................................................................................................................2512.002.00----------------------------------1.00----------------------------------------------------------1.00---------
...................................................................................................................................................................................................................................CTGGAGAAGGAGGTGGAGAGCAT2312.002.00------2.00------------------------------------------------------------------------------------------------
.............................................TGCTTGGTAAACAGACTCTGGGAC.....................................................................................................................................................................................242.000.00----2.00--------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCCTGGCAC...........................2512.003.00------------------------------------------------------------1.00------------------------1.00-----------------
......................................................................................................................................................................................................................................GAGAAGGAGGTGGAGAGCA.1912.002.00----------2.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................AGAAGGAGGTGGAGAAAAA192.000.00----------------------------------------------------------------------1.00---1.00----------------------------
................................................................................................................................................................................GTTCTGGTTGATATCTGG........................................................1812.002.00-----------------------------------------2.00-------------------------------------------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGC..................................1812.002.00--1.00---------1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CCTGGCAGTGCCCTGGAGAAGGAGGTGG.......2812.002.00--------------------------------2.00----------------------------------------------------------------------
.................................................................................................................................................................................................................AATCGGCCTGGCAGTGA........................172.000.00-------------------------2.00-----------------------------------------------------------------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAA........................................................................................................................................................2312.003.001.00---------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AAGAATCGGCCTGGCAGTGCCC......................2212.002.00---------1.00----------------------------------1.00----------------------------------------------------------
.......................................................................................................................................................................................................................CCTGGCAGTGCCCTGGAGAAGGAGGTGGA......2912.002.00-------1.00-------------------------------------------------------------------------------1.00---------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAGGTAAA...................................................................................................................................................2812.001.00-2.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCTG...............................2012.002.00--------2.00----------------------------------------------------------------------------------------------
.TGGCGCATGATGCCATGGTTTTGGTC...............................................................................................................................................................................................................................2612.002.00----2.00--------------------------------------------------------------------------------------------------
.............................................................................CCAGAGTCTATGCTGAGGGAG........................................................................................................................................................2112.002.00--1.00-------------1.00--------------------------------------------------------------------------------------
............................................................................CCCAGAGTCTATGCTGAGGGAG........................................................................................................................................................2212.002.00----------------1.00-------1.00------------------------------------------------------------------------------
...................................................................ATCTGTGTCCCCAGAGTCTATGCTGAGGGAG........................................................................................................................................................3111.001.00-----------------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................................................ATCGGCCTGGCAGTGCCCTGGAGAAGG.............2711.001.00-------------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................................................................................TCCAGGGAACAAAGAATCGGC..................................2111.001.00------------------------------------------------------------------------1.00------------------------------
...............................................................................AGAGTCTATGCTGAGGGAG........................................................................................................................................................1911.001.00--------------------------------------------------------------------1.00----------------------------------
................................................................................................................................................................................................................GAATCGGCCTGGCAGTGCCCTGGAG.................2511.001.00---------------------------------------------------------------------------1.00---------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCC.................................1811.001.00--------------------------------------1.00----------------------------------------------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCCTGGCAGT..........................2611.001.00--------1.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGAATCGGCCTGGCAGTG.........................1811.001.00----------1.00--------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AAGAATCGGCCTGGCATT..........................181.000.00-----------------------------------------------------------------------------1.00-------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCCT................................2011.001.00------1.00------------------------------------------------------------------------------------------------
............................................................................................AGGGAGGTACCTGTGGACCAGTGGTCC...................................................................................................................................2711.001.00------------------------------------------------------------------------------1.00------------------------
...............................................CTTGGTAAACAGACTCTGGGACCTG..................................................................................................................................................................................251.000.00----1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCTGG..............................2111.001.00------1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................TGATTGTTCTGGTTGATATCTGGTT......................................................2511.001.00---------------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................................AAAGAATCGGCCTGGCAGTGC........................2111.001.00----------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................................................................TGGAGAAGGAGGTGG.......1501.001.00------------------------------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................CAAAGAATCGGCCTGGCAGTGCCCTGGA..................2811.001.00-------------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCCTGGT.............................231.000.00------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................GAACAAAGAATCGGCCTGGC.............................2011.001.00---------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCTGGCAG...........................2411.001.00-----------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................CTGATTGTTCTGGTTGATATCTG.........................................................2311.001.00-------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................................................................CTGATTGTTCTGGTTATCT.............................................................191.000.00-------------------------------------------------------------------------------------------1.00-----------
..............................................................................................................................................................................................................AAGAATCGGCCTGGCAGTGCCCTGGA..................2611.001.00-----------------------------------------------------------------------------------------------1.00-------
..........................................................................................................................................................................................................AACAAAGAATCGGCCTGGCAGTGCCCTGG...................2911.001.00-------------------------1.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCTGGCAGTGCCCT.....................3011.001.00--1.00----------------------------------------------------------------------------------------------------
.......................................................................GTGTCCCCAGAGTCTATGCTGAGGCA.........................................................................................................................................................261.000.00-----------------------------------1.00-------------------------------------------------------------------
............................................GTGCTTGGTAAACAGACTCTGGGATC....................................................................................................................................................................................2611.001.00--------------------------1.00----------------------------------------------------------------------------
.......................................................................GTGTCCCCAGAGTCTATGCTGAGGGA.........................................................................................................................................................2611.001.00-----------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................ATCGGCCTGGCAGTGCCCTGGA..................2211.001.00---------------------------1.00---------------------------------------------------------------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAGGTA.....................................................................................................................................................2611.001.00---------------------------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................................GAGAAGGAGGTGGAGAGCAT2011.001.00--------------------------------------------------------------------------------------------------1.00----
......................................................................................................................................................................................................AGGGAACAAAGAATCGGCCTGGCAGTGCCCTG....................3211.001.00--------------------------------------------1.00----------------------------------------------------------
...........................................................................................................................................................................................................ACAAAGAATCGGCCTGGCAGTGCCCTGGAGAAGGA............3511.001.00----------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................GAATCGGCCTGGCAGTGCCCTGGAGAAGGAGGT.........3311.001.00--1.00----------------------------------------------------------------------------------------------------
........................................................................................GCTGAGGGAGGTACCTGTTG..............................................................................................................................................201.000.00--1.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................GAGAAGGAGGTGGAGACTC.191.000.00--------------------------------------------------------1.00----------------------------------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAGGTACC...................................................................................................................................................2811.001.00---------------------------------------------1.00---------------------------------------------------------
................................................................................................AGGTACCTGTGGACCACGGG......................................................................................................................................201.000.00------------------------1.00------------------------------------------------------------------------------
...........................................................................CCCCAGAGTCTATGCTGAGGGAGA.......................................................................................................................................................2411.0089.00---1.00---------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................CTGGAGAAGGAGGTGGAGAGC..2111.001.00--------------------------------------------------------------------------------------------1.00----------
....................................................................................................................................................................................................................................TGGAGAAGGAGGTGGAGAGC..2011.001.00-------------------------------------------------1.00-----------------------------------------------------
..........................................TAGTGCTTGGTAAACATTGT............................................................................................................................................................................................201.000.00---------------------1.00---------------------------------------------------------------------------------
.........................TCACCTCAAGGCCTGCTTAGTGCT.........................................................................................................................................................................................................2411.001.00----1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGGGAACAAAGAATCGGC..................................1911.001.00----------------------------------------1.00--------------------------------------------------------------
..............................................................................................................................................................................................................AAGAATCGGCCTGGCAGTGCC.......................2111.001.00---------1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AATCGGCCTGGCAGTGCCCTGGAGAAGGAGGTGG.......3411.001.00----------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................ATCGGCCTGGCAGTGCCCTGGAGAAGGAGG..........3011.001.00--1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GAACAAAGAATCGGCCTGGCAGTGC........................2511.001.00------------------------------1.00------------------------------------------------------------------------
.......................................................................................................................................................................................................GGGAACAAAGAATCGGCCTGGC.............................2211.001.00--1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CGGCCTGGCAGTGCCCTGGAGAAGGA............2611.001.00--1.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AACAAAGAATCGGCCTGGCAGTGC........................2411.001.00-------------------------------------------------------------------------------1.00-----------------------
.....................................................................................................................................................................................................................................GGAGAAGGAGGTGGAGAGCA.2011.001.00-------------------------------------------------1.00-----------------------------------------------------
...............................................................................................................................................................................TGTTCTGGTTGATATTAG.........................................................181.000.00---------------------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................ACAAAGAATCGGCCTGGCAGTGCCTAT....................271.000.00------------------------------------------------------1.00------------------------------------------------
...............................................................................................................................................................................................................AGAATCGGCCTGGCAGTGCCCCG....................231.000.00----1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CGGCCTGGCAGTGCCCTGGAGAAGGAG...........2711.001.00--------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................TGGAGAAGGAGGTGGAGAG...1911.001.00------1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGAATCGGCCTGGCAGTGCCCTGGAGAAGGA............3111.001.00--1.00----------------------------------------------------------------------------------------------------
........................................................................TGTCCCCAGAGTCTATGCT...............................................................................................................................................................1911.001.00--------1.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGAATCGGCCTGGCAGTGCCCTGGAGAAGGAGGT.........3411.001.00---------------------------------------------------------------------------------1.00---------------------
..............................................................................CAGAGTCTATGCTGAGGGAG........................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00------
...GCGCATGATGCCATGGTTTTG..................................................................................................................................................................................................................................2111.001.00---------------------------1.00---------------------------------------------------------------------------
.............................................TGCTTGGTAAACAGACTCTGGGACCTG..................................................................................................................................................................................271.000.00-------------------------------------------------------------------------------------------------1.00-----
........................................................................................................................................................................................................GGAACAAAGAATCGGCCTGGC.............................2111.001.00------------------------------------1.00------------------------------------------------------------------
..................................................................GATCTGTGTCCCCAGAGTCTATGCTGAGGGAG........................................................................................................................................................3211.001.00-----------------------------------------------------------1.00-------------------------------------------
....................................................................................................ACCTGTGGACCAGTGGTTTC..................................................................................................................................201.000.00----1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CGGCCTGGCAGTGCCCTGGA..................2011.001.00---------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................GAACAAAGAATCGGCCTGGCAG...........................2211.001.00--------------------------------------------------------------------------------1.00----------------------
...........................................................................................................................................................................TGATTGTTCTGGTTGAT..............................................................1711.001.00-----------------------------------------------------------------1.00-------------------------------------
.................................................................................................................................................................................................................................CCCTGGAGAAGGAGGTGGAGTTTT.2420.500.50---------------------------------------------------------------------------------------------------0.50---
.................................................................................................................................................................................................................................CCCTGGAGAAGGAGGTGGAG.....2020.500.50---------------------------------------------------0.50---------------------------------------------------
.....................................................................................................................................................................................................................................GGAGAAGGAGGTGGAGAGC..1920.500.50--------------------------------------------------0.50----------------------------------------------------
....................................................................................................................................................................................................................................TGGAGAAGGAGGTGGAGA....1840.250.25--------0.25----------------------------------------------------------------------------------------------
.................................................................................AGTCTATGCTGAGGG..........................................................................................................................................................1560.170.17-----------------------------------------------------------------------------------------------------0.17-
.............................................................................................................................................................................................................................AGTGCCCTGGAGAAGG.............1660.170.17----------------------------------------------------------------------------------------------------0.17--
.....................................................................................................................................................................................................................................GGAGAAGGAGGTGGAGAG...1860.170.17------------------------------------------------------------------------------------------------------0.17

Antisense strand
TTGGCGCATGATGCCATGGTTTTGGTCACCTCAAGGCCTGCTTAGTGCTTGGTAAACAGACTCTGGGATCTGTGTCCCCAGAGTCTATGCTGAGGGAGGTACCTGTGGACCAGTGGTCCTGCTGGGTGTTTAGCCTCTGAGGACAGGGTTCTTGGGTTCCTGTGTAGCTCCTGATTGTTCTGGTTGATATCTGGTTCCAGGGAACAAAGAATCGGCCTGGCAGTGCCCTGGAGAAGGAGGTGGAGAGCAT
.......................................................................(((((.((((((((...((((.((((...(((((.(((((....(((((...((((.....))))...)))))..))))).)))))))))...))))....)))...)))))..)))))(((....)))..................................................
......................................................................71...............................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189782SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040023(GSM532908)
G575T. (cervix)
.............................................................................................GGGAGGTACCTGTGGACT........................................................................................................................................... 181.000.00--------------------------------------1.00----------------------------------------------------------------
....................................................TAAACAGACTCTGGGAATA................................................................................................................................................................................... 191.000.00---------------------1.00---------------------------------------------------------------------------------