ID: uc003ctz.2_intron_43_0_chr3_48612560_r
GENE: COL7A1(74)
chr3:48612510-48612689-


(10)
B-CELL 		(1)
BRAIN 		(11)
BREAST 		(28)
CELL-LINE 		(4)
CERVIX 		(4)
FIBROBLAST 		(4)
HEART 		(3)
HELA 		(2)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(62)
SKIN 		(1)
TESTES 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
TATTTGCATTTCAGGGAGAACGGGGAGAGAAAGGAGAACGTGGAGAACAGGTGGGCTGCGATGGGCTTCGTGGGGCAGGCTGTCTGGAGGCTGTGCTGGGGCTGCCACCCCATTTTCTTGTTTCCTGCAGGGCAGAGATGGCCCTCCTGGACTCCCTGGAACCCCTGGGCCCCCCGGACC
..................................................((((.(((((...((((((...((((.....)))).)))))).)))..)).))))...........................................................................
..................................................51.....................................................106........................................................................
SizePerfect hitTotal NormPerfect NormSRR038854(GSM458537)
MM653. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM541797(GSM541797)
differentiated human embryonic stem cells. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
................................................................................TGTCTGGAGGCTGTGCTGGGGC..............................................................................22152.0052.001.00-1.002.002.001.002.00-3.00--1.003.002.00---1.004.00--1.00----1.00-1.004.00---1.00--1.00--2.001.00---2.00----2.002.00---1.001.00-----1.001.00------1.00--1.00------1.00---------1.00-------------------1.00----1.00----------------1.00----
.........................................................GCGATGGGCTTCGTGGGGCAG......................................................................................................21142.0042.00-1.001.002.00--1.002.002.00--1.001.002.003.00--1.00--1.00-1.002.00-1.00-1.002.00--1.00---------1.00-----1.002.00-----1.00--2.00-1.00------------------1.00-----------------1.00-----1.00--1.00--1.00-1.00--------1.00----------1.00-----
..........................................................CGATGGGCTTCGTGGGGCAG......................................................................................................20129.0029.002.003.001.00-1.002.001.00--2.002.00---1.00------1.00-1.001.00--1.00--1.001.00----1.00----------------1.00--1.00-----1.001.00-------------------1.00-----------------------1.00------------------1.00---------
..........................................................CGATGGGCTTCGTGGGGCA.......................................................................................................19129.0029.007.00--1.001.00---1.001.00-1.00--------1.00---------------------2.00---------------------1.00--2.00-1.00-1.00--------------1.00-----1.00--1.00---1.00------------1.00--1.00----1.00-------1.001.00------
..........................................................CGATGGGCTTCGTGGGGC........................................................................................................18127.0027.002.00--2.00---2.00-1.002.001.001.00---1.00----3.00-2.00--1.00---1.002.00----1.00-1.00--------------------------------------1.00---------1.00---------1.00-------------------------1.00------------
.........................................................GCGATGGGCTTCGTGGGGC........................................................................................................19122.0022.004.00---4.002.00-1.00-1.00---1.00--2.00--1.00------------------1.00--1.00--1.00---------------1.00---------------------------------------------1.00------1.00----------------------
.........................................................GCGATGGGCTTCGTGGGGCA.......................................................................................................20112.0012.002.003.001.002.00--------------------------1.00------2.00--------------------------1.00-----------------------------------------------------------------------
.................................GAGAACGTGGAGAACAG..................................................................................................................................1719.009.00--------------1.00----------1.001.00--------1.00------------------------1.00--------------1.00------1.00----------1.00------------------------------1.00-----------
..........................................................CGATGGGCTTCGTGGGGCAGG.....................................................................................................2118.008.00-1.002.00------------1.00----------------1.001.001.00-------------------------------------------------1.00---------------------------------------------------
.................................................................................GTCTGGAGGCTGTGCTGGGGC..............................................................................2118.008.00--2.00----1.00-------2.00----1.00-----------1.00----------------------1.00--------------------------------------------------------------------------------
..........................................................CGATGGGCTTCGTGGGG.........................................................................................................1716.006.00---------1.00-----1.00------------1.00-1.00------------1.00--------------------------------------------1.00-----------------------------------------------
.........................................................GCGATGGGCTTCGTGGGGCAGG.....................................................................................................2216.006.002.00-1.00---1.00----1.00--------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................TGGAGGCTGTGCTGGGGCTGCCACC.......................................................................2515.005.00--1.00-----------1.00---------2.00---------------------------------------------1.00-----------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGCTGGGGC..............................................................................2315.005.00-1.00----1.00--------1.001.00-----------------------------------1.00-----------------------------------------------------------------------------------
....................................................................................TGGAGGCTGTGCTGGGGC..............................................................................1824.504.50----0.500.50---------0.50---------0.50--------------------0.500.500.500.50-----------------------------------------------------------------------------------0.50--
.........................................................GCGATGGGCTTCGTGGGG.........................................................................................................1814.004.00-2.001.00-----------------------------------------------------1.00-------------------------------------------------------------------------------
..................................................GTGGGCTGCGATGGGCTTCGTG............................................................................................................2214.004.00-----------------4.00----------------------------------------------------------------------------------------------------------------------
........................................................TGCGATGGGCTTCGTGGGGCAG......................................................................................................2214.004.00---1.00-----------1.00-------------------------1.00--------------------------------------------------------------1.00-------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGGCTG............................................................................2414.004.00-2.00----1.00--1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................GCGATGGGCTTCGTGGGGCAGGC....................................................................................................2314.004.00----------1.001.00---------------1.00-----------1.00------------------------------------------------------------------------------------------------
............................................................ATGGGCTTCGTGGGGC........................................................................................................1633.333.33-----0.33-------0.67------0.330.33----0.33------0.330.33-------------------------------------0.33-------------------------------------------------------------0.33-
...............................AGGAGAACGTGGAGAACAG..................................................................................................................................1913.003.00---------------------------------------------1.00----------------------2.00-------------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCAGGCTGTC................................................................................................2313.003.00---------------------------------1.00-----------1.00-----------------------------------1.00------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCAGGC....................................................................................................1913.003.00----1.00---1.00---------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................GTCTGGAGGCTGTGCTGGGGCTG............................................................................2313.003.00-1.00-------1.00------------------------------------------------------------------------------------------1.00-----------------------------------
..................................AGAACGTGGAGAACAG..................................................................................................................................1622.002.00------0.50-------------------------0.50------------1.00------------------------------------------------------------------------------------------
..............................................................GGGCTTCGTGGGGCAGGCTGTCTGGAGGC.........................................................................................2912.002.00----------------------------------------------2.00-----------------------------------------------------------------------------------------
..................................................................................TCTGGAGGCTGTGCTGGGGC..............................................................................2012.002.00-1.00-----------------------------------------------------------------------------------------------------1.00--------------------------------
...............................AGGAGAACGTGGAGAACAGGGCAG.............................................................................................................................242.000.00----------2.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCAG......................................................................................................1712.002.00----------------------------------1.00--------------------------------------1.00--------------------------------------------------------------
....................................................................................TGGAGGCTGTGCTGGGGCTG............................................................................2012.002.00------------2.00---------------------------------------------------------------------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGCTGGGGCATC...........................................................................2612.005.00----------------------------------------------------------2.00-----------------------------------------------------------------------------
..........................................................CGATGGGCTTCGTGGGGCAGGC....................................................................................................2212.002.00--1.00-------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................GCTGTCTGGAGGCTGTGCTGGGGC..............................................................................2412.002.00-------------------------2.00--------------------------------------------------------------------------------------------------------------
..................................................GTGGGCTGCGATGGGCTTCGTGG...........................................................................................................2312.002.00-------------------2.00--------------------------------------------------------------------------------------------------------------------
..............................................................GGGCTTCGTGGGGCAGGCTGTC................................................................................................2212.002.00-1.00-----------------------------------------------------------------------------------------------------------------------------1.00--------
............................................................................AGGCTGTCTGGAGGCTGTGCTGGGGCTGCCACC.......................................................................3312.002.00-----------------------------------1.00----------------------------------1.00-----------------------------------------------------------------
.......................................................CTGCGATGGGCTTCGTGGGGCAG......................................................................................................2312.002.00--------------1.00--------------------1.00----------------------------------------------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCAGG.....................................................................................................1812.002.001.00----1.00----------------------------------------------------------------------------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGCT...................................................................................1841.501.50---0.500.25-----------0.25---------------------------------0.250.25------------------------------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGC........................................................................................................1551.401.40------0.200.20--------------0.20-------------0.20---------0.20-----0.20--------------------0.20--------------------------------------------------------------
......................................................................TGGGGCAGGCTGTCTGG.............................................................................................1711.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................TTCGTGGGGCAGGCTGTC................................................................................................1811.001.001.00---------------------------------------------------------------------------------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGCTGGGGCTGCCACCC......................................................................3111.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GCTGTCTGGAGGCTGTGCTGGGGCTGCCACC.......................................................................3111.001.00--------------------------------1.00-------------------------------------------------------------------------------------------------------
.........................................................GCGATGGGCTTCGTGGGGCAGGCTG..................................................................................................2511.001.00------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................GGCTTCGTGGGGCAGGCTGTC................................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------1.00-------------
..................................................GTGGGCTGCGATGGGCTTCGTGGGGCAGG.....................................................................................................2911.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------------
............................................................ATGGGCTTCGTGGGGCAGGC....................................................................................................2011.001.001.00---------------------------------------------------------------------------------------------------------------------------------------
..............................AAGGAGAACGTGGAGAACAGGGTA..............................................................................................................................241.000.00-------------------------------------------1.00--------------------------------------------------------------------------------------------
......................................................GCTGCGATGGGCTTCGTGGGGCAGGC....................................................................................................2611.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................GAACGTGGAGAACAGCGA...............................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------1.00----------------------------------
...........................................................GATGGGCTTCGTGGGCCAT......................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
.........................................................GCGATGGGCTTCGTGGGGCAGGCT...................................................................................................2411.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------------
............................................................................AGGCTGTCTGGAGGCTGTGCTGGGG...............................................................................2511.001.00-----------1.00----------------------------------------------------------------------------------------------------------------------------
.......................................................CTGCGATGGGCTTCGTGGGGCA.......................................................................................................2211.001.00-----------------------------------------------------------1.00----------------------------------------------------------------------------
..................................................GTGGGCTGCGATGGGCTT................................................................................................................1811.001.00------------------------------------------------------------------------------------------1.00---------------------------------------------
..........................GAGAAAGGAGAACGTGGAGAAC....................................................................................................................................2211.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
.........................AGAGAAAGGAGAACGTGGAGAACAGGGCA..............................................................................................................................291.000.00---------------------------------------------------------------1.00------------------------------------------------------------------------
...........................................................................CAGGCTGTCTGGAGGCTGTGCTGGGGC..............................................................................2711.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................TGGAGGCTGTGCTGGGGCTCAC..........................................................................221.000.00----------------------------------------------------------------------------1.00-----------------------------------------------------------
..............................................................GGGCTTCGTGGGGCAGGCTGTCTGGAGG..........................................................................................2811.001.00-----------------------------------------------------------------1.00----------------------------------------------------------------------
.........................AGAGAAAGGAGAACGTGGAG.......................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------------------------------1.00-------------------
...........................................................GATGGGCTTCGTGGGG.........................................................................................................1611.001.00--------------------1.00-------------------------------------------------------------------------------------------------------------------
..........................................................CGATGGGCTTCGTGGGGCTG......................................................................................................2011.0027.00---------------------------------------------------1.00------------------------------------------------------------------------------------
...................................................TGGGCTGCGATGGGCTTC...............................................................................................................1811.001.00-------------1.00--------------------------------------------------------------------------------------------------------------------------
..............................................................GGGCTTCGTGGGGCAGGCTGTCTGG.............................................................................................2511.001.00------------------------------------------------------------------1.00---------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGC...............................................................................211.000.00-------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................TGCGATGGGCTTCGTGGGGCA.......................................................................................................2111.001.00----------------------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................CTGCGATGGGCTTCGTGGGGCAGGC....................................................................................................2511.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
......................................................GCTGCGATGGGCTTCGTGGGGCAG......................................................................................................2411.001.00------------------------------------------1.00---------------------------------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGGCAA............................................................................2411.0052.00---1.00------------------------------------------------------------------------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGG...............................................................................2111.001.00---------------------------------------------------1.00------------------------------------------------------------------------------------
.................................................................................GTCTGGAGGCTGTGCTGGGGCTGCCACC.......................................................................2811.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
...........................AGAAAGGAGAACGTGGAG.......................................................................................................................................1811.001.00-------------------------------------------------------------1.00--------------------------------------------------------------------------
........................................................................GGGCAGGCTGTCTGGAGGC.........................................................................................1911.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------
..........................................................CGATGGGCTTCGTGGGGCAGGCTGGC................................................................................................261.000.001.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................................................CTGGAGGCTGTGCTGGGGC..............................................................................1911.001.00-----1.00----------------------------------------------------------------------------------------------------------------------------------
.....................................................GGCTGCGATGGGCTTCGTGGGGCAGGC....................................................................................................2711.001.00----------------------------------------1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................CCTGGACTCCCTGGAACCCCTGGG...........2411.001.00--------------------------------------------------------------------------1.00-------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGCTGGGGCTGCC..........................................................................2711.001.00--------------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................GTGGGCTGCGATGGGCT.................................................................................................................1711.001.00----------------1.00-----------------------------------------------------------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGGT..............................................................................2211.001.00---------------------------------------------------------------------------------------------------------------------1.00------------------
.........................................................GCGATGGGCTTCGTGGGGCAGGCTGT.................................................................................................2611.001.00----------------------------------------------------1.00-----------------------------------------------------------------------------------
.........................................................GCGATGGGCTTCGTGGGGCAGT.....................................................................................................2211.0042.00-----------------------------------------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................GGCAGAGATGGCCCTCCTGGACTCCCTG......................2811.001.00----------------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................TGGGCTGCGATGGGCTTCGTGGGGCA.......................................................................................................2611.001.001.00---------------------------------------------------------------------------------------------------------------------------------------
..................AACGGGGAGAGAAAGGAGAACGTGGAGAACAG..................................................................................................................................3211.001.00---------------------------1.00------------------------------------------------------------------------------------------------------------
.......................................................CTGCGATGGGCTTCGTGGGGCAGGCTGT.................................................................................................2811.001.00------------1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCAGGCT...................................................................................................2011.001.00--------------------------------------------------------------------------------1.00-------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGCTGGGAC..............................................................................231.000.00------------------1.00---------------------------------------------------------------------------------------------------------------------
.............................AAAGGAGAACGTGGAGAACAGGGCA..............................................................................................................................251.000.00-------------------------------------------------------------------------------------------------------------------------1.00--------------
................................................................GCTTCGTGGGGCAGGC....................................................................................................1611.001.00----------------------------------1.00-----------------------------------------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGGCACCC..........................................................................2611.0052.00-----------------------------------------------------------------------------------------------------------------------------1.00----------
.................................GAGAACGTGGAGAACAGGGC...............................................................................................................................201.000.00------------------------------------------------------------------1.00---------------------------------------------------------------------
..................................................................................TCTGGAGGCTGTGCTGGGGCT.............................................................................2111.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................ACCCCTGGGCCCCCCCACC.191.000.00---------------------------------------------------------------------------------------------------------------1.00------------------------
......................................................GCTGCGATGGGCTTCGTGGGGA........................................................................................................221.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
........................................................TGCGATGGGCTTCGTGGGGCAGGC....................................................................................................2411.001.00-------------------1.00--------------------------------------------------------------------------------------------------------------------
........................................................TGCGATGGGCTTCGTGGGGC........................................................................................................2011.001.00-----------------------------------------------1.00----------------------------------------------------------------------------------------
....................................................................................TGGAGGCTGTGCTGGGGCTGCCACCT......................................................................2611.005.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
...........................................................GATGGGCTTCGTGGGGCAG......................................................................................................1911.001.00-1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................TCTGGAGGCTGTGCTGGGGCTG............................................................................2211.001.001.00---------------------------------------------------------------------------------------------------------------------------------------
.........................................................GCGATGGGCTTCGTGGGGCAGGCTGGC................................................................................................2711.001.00-------------------------------------1.00--------------------------------------------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCAGGCTGTCTGGAGGCT........................................................................................3111.001.00-------------------------------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................GGAGGCTGTGCTGGGGCTGG...........................................................................201.000.00--------------------------------------------------------------------------------------------------1.00-------------------------------------
........................................................................GGGCAGGCTGTCTGGAGG..........................................................................................1811.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------
..................................AGAACGTGGAGAACAGGTG...............................................................................................................................1911.001.00----------------------------------------------------------------------------------------------------------------------1.00-----------------
..........................................................................................CTGTGCTGGGGCTGCCACC.......................................................................1911.001.001.00---------------------------------------------------------------------------------------------------------------------------------------
...................................................................TCGTGGGGCAGGCTGTC................................................................................................1711.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
...............................................................GGCTTCGTGGGGCAGGC....................................................................................................1711.001.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
...........................AGAAAGGAGAACGTGGAGAACAGGGCAG.............................................................................................................................281.000.00------------------------1.00---------------------------------------------------------------------------------------------------------------
.......................GGAGAGAAAGGAGAACGTGGAGAACAG..................................................................................................................................2711.001.00-----------------------------------------------------------------1.00----------------------------------------------------------------------
............................................................ATGGGCTTCGTGGGGCAGG.....................................................................................................1911.001.00------------------------1.00---------------------------------------------------------------------------------------------------------------
.......................................................CTGCGATGGGCTTCGTGGGGCAGG.....................................................................................................2411.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------
...........................................................GATGGGCTTCGTGGGGCAGG.....................................................................................................2011.001.00----------1.00-----------------------------------------------------------------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGCTGGGGCT.............................................................................2311.001.00-------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................TGGGCTGCGATGGGCT.................................................................................................................1630.670.67-------------0.67--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TCCTGCAGGGCAGAGATGGC......................................2020.500.50-----------------------------------------------------------------------0.50----------------------------------------------------------------
.............................................................TGGGCTTCGTGGGGCA.......................................................................................................1620.500.50-------------------0.50--------------------------------------------------------------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTG.....................................................................................1650.400.40---------------------------0.20-------0.20----------------------------------------------------------------------------------------------------
................................................................................TGTCTGGAGGCTGTGC....................................................................................1670.290.29---------------0.14----------------------------------------------------------0.14-------------------------------------------------------------
...............................................................................CTGTCTGGAGGCTGTGC....................................................................................1750.200.20--------------------------------0.20-------------------------------------------------------------------------------------------------------
............................................................................................GTGCTGGGGCTGCCACC.......................................................................1750.200.20--0.20-------------------------------------------------------------------------------------------------------------------------------------
............................................................................AGGCTGTCTGGAGGCTG.......................................................................................1750.200.20----------------------------------------------0.20-----------------------------------------------------------------------------------------

Antisense strand
TATTTGCATTTCAGGGAGAACGGGGAGAGAAAGGAGAACGTGGAGAACAGGTGGGCTGCGATGGGCTTCGTGGGGCAGGCTGTCTGGAGGCTGTGCTGGGGCTGCCACCCCATTTTCTTGTTTCCTGCAGGGCAGAGATGGCCCTCCTGGACTCCCTGGAACCCCTGGGCCCCCCGGACC
..................................................((((.(((((...((((((...((((.....)))).)))))).)))..)).))))...........................................................................
..................................................51.....................................................106........................................................................
SizePerfect hitTotal NormPerfect NormSRR038854(GSM458537)
MM653. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR038853(GSM458536)
MELB. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR029124(GSM416753)
HeLa. (hela)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191418(GSM715528)
40genomic small RNA (size selected RNA from t. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038859(GSM458542)
MM386. (cell line)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM541797(GSM541797)
differentiated human embryonic stem cells. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
..........................GAGAAAGGAGAACGTCCTT....................................................................................................................................... 191.000.00------------------------------------------------------------------------------------------------------------------------------------1.00---
..........................................................................................................................................TGGCCCTCCTGGACTCGGCT...................... 201.000.00-------------------------------------------------------------------------------------1.00--------------------------------------------------
..........................................................................................TGGCAGCCCCAGCACAG......................................................................... 1740.250.25---------------------------------------------------------------------------------------------------------------------------------------0.25