ID: uc003ctz.2_intron_13_0_chr3_48605604_r
GENE: COL7A1(104)
chr3:48605554-48605981-


(1)
B-CELL
(2)
BRAIN
(2)
CELL-LINE
(1)
CERVIX
(1)
HELA
(6)
OTHER
(6)
SKIN
(2)
UTERUS

Sense strand
TGTGTTTCTCACAGGGTCAACCTGGTGCAGCAGGGATCCCTGGTGACCCGGTAAGATGCCCCTGCTCCCACAGGGGCCCCCTGTCCCCAGAGGGCCCCCGTCACCATGGTGGTCCCACCAGTGTGGTAGCTTTTGACCTTATAGTGACCCAGTGCTCTCATGGTGTCCTCATGTCACCCAGGGTCCCCCACCTCCACAGTAGCCGCCTATGATGGTGTCCCCTGCCTATGGTGACCCTTGTCCCCATGGCAAGCCCCAGTGGCTCTGGCCTCCAGAGGTGACTCCCACCCCATGGTGTTCCCTACCCACTATCCAGGGCGATTCTCTTTGGTCCCTCACTGACCTCCTCTGACCTCACATGGACCCTCTCCCTGCTAGGGATCCCCAGGAAAGGATGGAGTGCCTGGTATCCGAGGAGAAAAAGGAGA
.....................................................................................................................................................................................................................................................................................................((.((((....(((........)))...........((((.......))))................))))))..............................................................
.....................................................................................................................................................................................................................................................................................................294...........................................................................372......................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR343335SRR343334SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040009(GSM532894)
G727T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
..........................................................................................................................................................................................................................................................................................................TCCCTACCCACTATCCAG................................................................................................................18159.0059.0018.0017.0013.007.003.00------1.00---------
..........................................................................................................................................................................................................................................................................................................TCCCTACCCACTATCCAGA...............................................................................................................1918.0059.003.003.001.001.00-----------------
..........................................................................................................................................................................................................................................................................................................TCCCTACCCACTATCCA.................................................................................................................1715.005.00--4.001.00-----------------
...........................................................................................................................................................................................................................................................................................................CCCTACCCACTATCCAG................................................................................................................1712.002.002.00--------------------
...........................................................................................................................................................................................................CGCCTATGATGGTGTCCCCTGCCTATGGTGACCCTTGTCCCCATGGCAAGCCCCAGTGGCTCTGGCCTCCAGAGGTGACTCCCACCCCATGG.....................................................................................................................................9211.001.00--------------------1.00
.........CACAGGGTCAACCTGGTAAGG..............................................................................................................................................................................................................................................................................................................................................................................................................211.000.00------1.00--------------
...............................................................................................................................................................................................................................................................................................................................................................ACCTCACATGGACCCTG............................................................171.000.00----------1.00----------
.........................................................................................................................................................................CATGTCACCCAGGGTCCCCCACCTCCACA......................................................................................................................................................................................................................................2911.001.00-----1.00---------------
..................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAGGATGGAGTGCCT.......................1911.001.00--------------1.00------
.........................................................................................................................................................................................................................................................................................................................................................CCTCTGACCTCACATGGACCCTA............................................................231.000.00-----1.00---------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGAGAAAAAGGAGGAAG211.000.00-------------1.00-------
.................................GGATCCCTGGTGACCCG..........................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------1.00-
...........................................................................................................................................................................................................................................................................................................CCCTACCCACTATCCAGC...............................................................................................................1811.002.00---------1.00-----------
.............................................................................................................................................................................................................................................................................................................CTACCCACTATCCAG................................................................................................................1530.330.330.33--------------------

Antisense strand
TGTGTTTCTCACAGGGTCAACCTGGTGCAGCAGGGATCCCTGGTGACCCGGTAAGATGCCCCTGCTCCCACAGGGGCCCCCTGTCCCCAGAGGGCCCCCGTCACCATGGTGGTCCCACCAGTGTGGTAGCTTTTGACCTTATAGTGACCCAGTGCTCTCATGGTGTCCTCATGTCACCCAGGGTCCCCCACCTCCACAGTAGCCGCCTATGATGGTGTCCCCTGCCTATGGTGACCCTTGTCCCCATGGCAAGCCCCAGTGGCTCTGGCCTCCAGAGGTGACTCCCACCCCATGGTGTTCCCTACCCACTATCCAGGGCGATTCTCTTTGGTCCCTCACTGACCTCCTCTGACCTCACATGGACCCTCTCCCTGCTAGGGATCCCCAGGAAAGGATGGAGTGCCTGGTATCCGAGGAGAAAAAGGAGA
.....................................................................................................................................................................................................................................................................................................((.((((....(((........)))...........((((.......))))................))))))..............................................................
.....................................................................................................................................................................................................................................................................................................294...........................................................................372......................................................
SizePerfect hitTotal NormPerfect NormSRR343336SRR343337SRR343335SRR343334SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR189787SRR040009(GSM532894)
G727T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
........................................................TGCCCCTGCTCCCACAGAA................................................................................................................................................................................................................................................................................................................................................................. 191.000.00------------1.00--------
......................................................................................................................................................................................................................................................................................................................................TTTGGTCCCTCACTGAG..................................................................................... 171.000.00----------------1.00----
............................................................................CCCCCTGTCCCCAGAGGGCCCCCA........................................................................................................................................................................................................................................................................................................................................ 241.000.00-------1.00-------------
.......................................................................................CAGAGGGCCCCCGTCACTC.................................................................................................................................................................................................................................................................................................................................. 191.000.00---------------1.00-----
........................................................................................................................................................................................................................................................................................................GTTCCCTACCCACTAGG................................................................................................................... 171.000.00------1.00--------------
.........................................................................................................................................................................................................................................................................................................TTCCCTACCCACTATGCA................................................................................................................. 181.000.00--------1.00------------
....................................................................ACAGGGGGCCCCTGTG........................................................................................................................................................................................................................................................................................................................................................ 1611.001.00-----------------1.00---
..........................................................................................................................................................................................................................................................................................................................................................................ACCCTCTCCCTGCTATTCT............................................... 191.000.00--------1.00------------
....................................................................................................................................................................................................................................................................GGCTCTGGCCTCCAGAGTGC.................................................................................................................................................... 201.000.00-------1.00-------------
..............................................................................................CCCCCGTCACCATGGTACGG.......................................................................................................................................................................................................................................................................................................................... 201.000.00------------------1.00--