ID: uc003csr.2_intron_9_0_chr3_48423576_f.5p
GENE: (10)
chr3:48423526-48423775+


(1)
AGO1.ip 		(1)
AGO1.ip OTHER.mut 		(2)
AGO2.ip 		(2)
B-CELL 		(3)
BRAIN 		(15)
BREAST 		(23)
CELL-LINE 		(7)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(1)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(2)
OTHER 		(2)
OVARY 		(1)
RRP40.ip 		(16)
SKIN 		(1)
TESTES 		(2)
UTERUS

Sense strand
AGGAGCTGCTGTCACCTGGAAAACACGTGGCATGATCACACAACAGACAGGTAAGCTCTGTTTTGTGATGTAAACATCCCCTAAACAACTTTTTTTTTTTGAGACGGAGTCTCCCTATGTCACCAGGCTGTAGTGCAGTGGCGTGATCTCAACTCACTGCAACCTCCGACTCCCGGGTTCTAGCAATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCACACCTGGCTAATT
..................................................................((((....))))......................(((((...)))))...(((((((...((......)).)))))))..........................................................................................................
...............................................................64..............................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM379267(GSM379267)
Small RNA from clear cell ovarian cancer tissue. (ovary)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)		SRR037937(GSM510475)
293cand2. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189782SRR343335SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		SRR040042(GSM532927)
G428N. (cervix)		SRR343334SRR553576(SRX182782)
source: Testis. (testes)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................TGTAAACATCCCCTACTGG...................................................................................................................................................................19526.600.20---4.00-2.20-3.00-3.20-2.60------0.801.000.800.60---0.40--0.20----0.80-----------------0.200.400.600.60-0.40-0.200.40-0.20-0.200.200.200.200.20-0.20--0.200.20--0.200.200.200.200.200.200.20--0.200.200.20---0.20-0.20-
..................................................................GATGTAAACATCCCCGAC......................................................................................................................................................................188.000.00----5.00---3.00--------------------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTG....................................................................................................................................................................1855.800.20---0.20---------------0.20--0.401.200.60--1.00-0.80-------0.80-------------0.20------------------------------------0.200.20-----
............................................................................................................................................................................................................................ACAGGCATGTGCCACCACACCGGCG.....253.000.003.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGGGATTACAGGCATGTGCCTATT.............243.000.00--3.00--------------------------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTGT...................................................................................................................................................................1952.800.20---1.60----------------0.20---0.20--------------------------0.40------0.20---------0.20--------------------------
....................................................................TGTAAACATCCCCTAATGGA..................................................................................................................................................................202.000.00-----2.00-----------------------------------------------------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGG............................................................................................................................................232.000.001.001.00---------------------------------------------------------------------------------------------
......................................................................................................................GTCACCAGGCTGTAGTGCTCTG..............................................................................................................222.000.00----------------2.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CAGGCATGTGCCACCACACCGGCC.....242.000.002.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................ATTCTCCTGCTTCAGCCTCCCAAGTAGCCTGG.................................322.000.00-1.00------------------------------------------------1.00--------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGTCTCGCCC.....................................................................................................................................302.000.001.001.00---------------------------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTTG...................................................................................................................................................................1951.800.20---0.40---------------0.200.20------------0.20------------------0.20-----------------0.20----0.20-------0.20-----------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGTCTGGCC......................................................................................................................................291.000.001.00----------------------------------------------------------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGTCTGTC.......................................................................................................................................281.000.001.00----------------------------------------------------------------------------------------------
..................................................................GATGTAAACATCCCCGACT.....................................................................................................................................................................191.000.00----1.00------------------------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGAGAG.......................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................ATGTGCCACCACACCTGCCAT...211.000.00----------------------------------------------1.00------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTTACG...........................................................................................................191.000.00----------------------------------------1.00------------------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGTCTC...........................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------
.......................................................................................................................................................................................CAATTCTCCTGCTTCAGCCTCAATT..........................................251.000.00----------------------1.00------------------------------------------------------------------------
........................................................................................CTTTTTTTTTTTGAGACGGAGTGGG.........................................................................................................................................251.000.00-1.00---------------------------------------------------------------------------------------------
......................................................................................................................................GCAGTGGCGTGATCTCAATTT...............................................................................................211.000.00-------------------------------------------------1.00---------------------------------------------
.....................................................................................................................................................................................................................TGGGATTACAGGCATGTTCGC................211.000.00--------------------------------1.00--------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGGGGG.......................................................................................................231.000.00-----------------------------------------------1.00-----------------------------------------------
............................................................................................................................................................................................................................ACAGGCATGTGCCACCACACCGGCA.....251.000.001.00----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................ACAGGCATGTGCCACCACACCGGCC.....251.000.001.00----------------------------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTAATGG...................................................................................................................................................................191.000.00-----1.00-----------------------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGGGGT.......................................................................................................231.000.00----------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................................................................ACAGGCATGTGCCACCACACCGGTT.....251.000.001.00----------------------------------------------------------------------------------------------
...................................................................................AACAACTTTTTTTTTTTCG....................................................................................................................................................191.000.00-----------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................AACTCACTGCAACCTCCGGGT...............................................................................211.000.001.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GATTACAGGCATGTGCCACCACCGGC........261.000.00------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGGGATTACAGGCATGTGCCTGAA.............241.000.00--1.00--------------------------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGTGATAA.....................................................................................................251.000.00-------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................ATTACAGGCATGTGCCACCACACCGGCC.....281.000.00-1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TTCTCCTGCTTCAGCCTCCCAAGTAGCCGAG.................................311.000.001.00----------------------------------------------------------------------------------------------
..........................................................................................................................CCAGGCTGTAGTGCAGTGGCGGTGT.......................................................................................................251.000.00---------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................CTCACTGCAACCTCCGACTCCCGGGTAG......................................................................281.000.00-1.00---------------------------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGTGATCCCGG..................................................................................................281.000.001.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TAGCTGGGATTACAGGCATGTGCAACC..............271.000.00-----------------------------------------1.00-----------------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGA............................................................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGGCAT.......................................................................................................231.000.00-------------1.00---------------------------------------------------------------------------------
...................................................................................AACAACTTTTTTTTTTTCTGG..................................................................................................................................................211.000.00------------------------------------------1.00----------------------------------------------------
....................................................................TGTAAACATCCCCTAAGC....................................................................................................................................................................181.000.00-------1.00---------------------------------------------------------------------------------------
...............................................................................CCTAAACAACTTTTTTTTTG.......................................................................................................................................................201.000.00-----------------1.00-----------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGGGG........................................................................................................221.000.00-------------1.00---------------------------------------------------------------------------------
.............................................................................................................................GGCTGTAGTGCAGTGTTT...........................................................................................................181.000.00--------------------------1.00--------------------------------------------------------------------
...........................................................................................TTTTTTTTTGAGACGGAGTCTCCCCTC....................................................................................................................................271.000.00-1.00---------------------------------------------------------------------------------------------
......................................................................................AACTTTTTTTTTTTGAGACCGAC.............................................................................................................................................231.000.00-1.00---------------------------------------------------------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGGC...........................................................................................................................................241.000.00-1.00---------------------------------------------------------------------------------------------
.................................................................................................................................................................ACCTCCGACTCCCGGGTTCAGAC..................................................................231.000.00-1.00---------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGTAGCTGGGATTACAGGCATGTGCCACGTCT...........321.000.001.00----------------------------------------------------------------------------------------------
.......................................................................................ACTTTTTTTTTTTGAGACGGAGTCGGT........................................................................................................................................271.000.00-1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGGCATGTGCCACCACACCGGCC.....231.000.001.00----------------------------------------------------------------------------------------------
..................................................................GATGTAAACATCCCCTAC......................................................................................................................................................................181.000.00--------1.00--------------------------------------------------------------------------------------
...................................................................ATGTAAACATCCCCTACTAA...................................................................................................................................................................201.000.00---------------------------------------1.00-------------------------------------------------------
....................................................................TGTAAACATCCCCTACTGA...................................................................................................................................................................1950.800.20--------------------0.200.20-0.20---0.20-------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACT.....................................................................................................................................................................1750.800.20-------------------------------------------------------0.40-0.40-------------------------------------
....................................................................TGTAAACATCCCCTACTT....................................................................................................................................................................1850.600.20------------------------0.20-0.20-----------------------------------------------------------------0.20--
....................................................................TGTAAACATCCCCTACTTT...................................................................................................................................................................1950.600.20---0.60-------------------------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTCG...................................................................................................................................................................1950.400.20--------------------0.200.20-------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTGC...................................................................................................................................................................1950.400.20--------------------------------------------------------------0.20--------0.20-----------------------
...........................................................................................................................................................ACTGCAACCTCCGACTCCCGGGTTCTAGC..................................................................2930.330.330.33----------------------------------------------------------------------------------------------
.......................................................................................................................................................ACTCACTGCAACCTCCGACTCCCGG..........................................................................2540.250.25-0.25---------------------------------------------------------------------------------------------
.....................................................................................................................................................CAACTCACTGCAACCTCCGA.................................................................................2080.250.25------------------------------------------------------------0.25----------------------------------
....................................................................TGTAAACATCCCCTACTTC...................................................................................................................................................................1950.200.20------------------------------------------------------------------------------------------0.20----
....................................................................TGTAAACATCCCCTA.......................................................................................................................................................................1550.200.20------------------------------------------------------------------------------------0.20----------
....................................................................TGTAAACATCCCCTACTAG...................................................................................................................................................................1950.200.20--------------------------------------------------------------------------0.20--------------------
....................................................................TGTAAACATCCCCTACCTG...................................................................................................................................................................1950.200.20---------------------0.20-------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTCT...................................................................................................................................................................1950.200.20---------------------0.20-------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTAGTT....................................................................................................................................................................1850.200.20------------------------0.20----------------------------------------------------------------------
....................................................................TGTAAACATCCCCTAGTG....................................................................................................................................................................1850.200.20------------------------0.20----------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTTA...................................................................................................................................................................1950.200.20-------------------0.20---------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTACTC....................................................................................................................................................................1850.200.20-------------------------------------0.20---------------------------------------------------------
....................................................................TGTAAACATCCCCTACAGG...................................................................................................................................................................1950.200.20---------------------0.20-------------------------------------------------------------------------
....................................................................TGTAAACATCCCCTATCAG...................................................................................................................................................................1950.200.20-----------------------------0.20-----------------------------------------------------------------
......................................................................................................................................................AACTCACTGCAACCTCCGACTCCC............................................................................2470.140.14-0.14---------------------------------------------------------------------------------------------
..................................................................................................................................................TCTCAACTCACTGCAACCTCCGAC................................................................................2470.140.14----------------------------------------------------------------------------------------------0.14
.........................................................................................................................ACCAGGCTGTAGTGCAGTGGCGTGATC......................................................................................................2780.120.12---0.12-------------------------------------------------------------------------------------------

Antisense strand
AGGAGCTGCTGTCACCTGGAAAACACGTGGCATGATCACACAACAGACAGGTAAGCTCTGTTTTGTGATGTAAACATCCCCTAAACAACTTTTTTTTTTTGAGACGGAGTCTCCCTATGTCACCAGGCTGTAGTGCAGTGGCGTGATCTCAACTCACTGCAACCTCCGACTCCCGGGTTCTAGCAATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCACACCTGGCTAATT
..................................................................((((....))))......................(((((...)))))...(((((((...((......)).)))))))..........................................................................................................
...............................................................64..............................................................................144........................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM379267(GSM379267)
Small RNA from clear cell ovarian cancer tissue. (ovary)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)		SRR037937(GSM510475)
293cand2. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR189782SRR343335SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		SRR040042(GSM532927)
G428N. (cervix)		SRR343334SRR553576(SRX182782)
source: Testis. (testes)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189785SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577741(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR040016(GSM532901)
G645N. (cervix)		SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................................................................TTCTCCTGCTTCAGCCTCCCAAAA........................................ 244.000.00------4.00----------------------------------------------------------------------------------------
..............................................................................................................................................................GCAACCTCCGACTCCCGGGTTGGCG................................................................... 253.000.003.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................GGCATGTGCCACCACACCTGGCTCTAG 271.000.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................GCAATTCTCCTGCTTCAGCCTCCCAACC........................................ 281.000.00-1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TCTCCTGCTTCAGCCTCCCAACA........................................ 231.000.00-1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................ACCCGGGAGTCGGAGGTTGC........................................................................ 2001.001.00-------------------------------1.00---------------------------------------------------------------
..................................................................................................................................................................................................CTTCAGCCTCCCAAGTAGCGCGG................................. 231.000.00------------1.00----------------------------------------------------------------------------------
............................................................................................................................AGGCTGTAGTGCAGTGGCGTAA........................................................................................................ 221.000.00------------------------------1.00----------------------------------------------------------------
...........................................................................................................................................................GAACCCGGGAGTCGGAGGTTGCAGT...................................................................... 2501.001.00----------------------------------1.00------------------------------------------------------------
..............................................................................................................................................................GCAACCTCCGACTCCCGGGTTGAGC................................................................... 251.000.001.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................CTCCCGGGTTCTAGCAATGC............................................................. 201.000.00----------1.00------------------------------------------------------------------------------------
..............................................................................................................................................................GCAACCTCCGACTCCCGGGTGAGC.................................................................... 241.000.00-1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................CTCCCGGGTTCTAGCAATG.............................................................. 191.000.00----------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................CACTGCAACCTCCGACTCCCGGGTTTCT.................................................................... 281.000.00--1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................................CACTGCAACCTCCGACTCCCGGGTCCG..................................................................... 271.000.001.00----------------------------------------------------------------------------------------------
.....................................................................................................................................TGCAGTGGCGTGATCTCAAAGT............................................................................................... 221.000.00--1.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................................CTCCTGCTTCAGCCTCCCAAGTCACC.................................... 261.000.00-1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................AATTCTCCTGCTTCAGCCTCCCATTT........................................ 261.000.00---------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................GTCGGAGGTTGCAGTG................................................................................ 1601.001.00--------------1.00--------------------------------------------------------------------------------
.......................................................................................................................................................................................CAATTCTCCTGCTTCAGCCTCAAA........................................... 241.000.00--------------------------------------1.00--------------------------------------------------------
..........................................................................................................................................................CACTGCAACCTCCGACTCCCGGGTTT...................................................................... 261.000.00--1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................AATTCTCCTGCTTCAGCCTCCCCTG......................................... 251.000.00------------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................AGTCGGAGGTTGCAGTG............................................................................... 1701.001.00--------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................................................................CCAAGTAGCTGGGATTACCTCT........................ 221.000.00--------------------------------------------1.00--------------------------------------------------
..............................................................................................................................................................GCAACCTCCGACTCCCGGGTTGGC.................................................................... 241.000.001.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................................AATTCTCCTGCTTCAGCCTCCCATA......................................... 251.000.00---------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................CACTGCAACCTCCGACTCTT............................................................................ 201.000.00------------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................................................................GGCATGTGCCACCACGG.......... 171.000.00----------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................CAATTCTCCTGCTTCAGCCTCCCAAA......................................... 261.000.00------------------------------------------------1.00----------------------------------------------
..............................................................................................................................................................................................CCTGCTTCAGCCTCCCAAGTTGGC.................................... 241.000.00-------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................................................GGCATGTGCCACCACACCTGGCTAATTCGC 301.000.00-1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................CTCCTGCTTCAGCCTCCCAAGTCAAC.................................... 261.000.00-1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TCTCCTGCTTCAGCCTCCCACCT........................................ 231.000.00-1.00---------------------------------------------------------------------------------------------
..............................................................................................................................................................................GGGTTCTAGCAATTCTCCTCT....................................................... 211.000.00-----------------------------------1.00-----------------------------------------------------------
..................................................................................................................................................AGTCGGAGGTTGCAGTGAGTTGAGA............................................................................... 2570.140.140.14----------------------------------------------------------------------------------------------