ID: uc003cqs.2_intron_14_0_chr3_47144914_r.5p
GENE: (6)
chr3:47147287-47147536-


(1)
AGO1.ip
(5)
AGO2.ip
(3)
B-CELL
(3)
BRAIN
(35)
CELL-LINE
(2)
HEART
(4)
HELA
(1)
LIVER
(3)
OTHER
(21)
SKIN
(1)
XRN.ip

Sense strand
CACGAAACAAAAACATCCATTACTATTTCATGGCCCTGAAGAATGATGAGGTAAGCAGCTTGGATATGTTTGCCTTGAAACAGATCTGTTAGGTTTGAAGGAGCCATTGATACTGATTTGATTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGGCAAGATCTCGGCTCACTGCAACCCCTGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCTTCC
............................................................................................................................................((((....))))(((.(((((((..((....)))))))))....)))...............................................................
.................................................................................................................114........................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR189782SRR189786SRR038853(GSM458536)
MELB. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343334SRR029124(GSM416753)
HeLa. (hela)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
..........................................................................................................................................................................................CAAGATCTCGGCTCACTGCAACTCTG......................................266.000.00--------------2.00-1.00--1.00--------1.00----1.00--------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTCCC...................................255.000.004.001.00----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGAT...................................224.000.00---4.00--------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCGGG........................................................................................................283.000.003.00-----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCGAG.......................................................................................................293.000.003.00-----------------------------------------------------------------------------
................................................................................................................................................................CTATCGCCCAGGCTGGAGTGCAGTG.................................................................2503.003.00-----------------------1.00-------------------------------1.00--1.00-------------------
................................................................................................................................TTTTTTTTTTTTTTTGGAGACGGAGGG...............................................................................................272.000.001.001.00----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTCC.........................................................................................................282.000.002.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCC........................................2002.002.00---------1.00---------------------------------------1.00----------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTCGCC...........................................................................................................272.000.00-2.00----------------------------------------------------------------------------
..............................TGGCCCTGAAGAATGATGAG........................................................................................................................................................................................................2012.002.00------------------------2.00-----------------------------------------------------
.....................................................................................................................................................................................AGTGGCAAGATCTCGGAA...................................................182.000.00-------------------------2.00----------------------------------------------------
..................................................................................................................................................................................................CGGCTCACTGCAACCCCTGCCTCCTGGGCTG.........................312.000.002.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCTGGT............................322.000.00-2.00----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCTCCCGTG............................312.000.002.00-----------------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCAGTGGCAACCTC.........................................................312.000.00-2.00----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGGGC..................................232.000.002.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................TGCAACCCCTGCCTCCAGCG............................202.000.002.00-----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCGAG........................................................................................................282.000.001.001.00----------------------------------------------------------------------------
.................................................................................................................................................................TATCGCCCAGGCTGGAGTGCAGTG.................................................................2402.002.00-----------------------1.00--------------------------------------------1.00---------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCGGCT...................................252.000.001.001.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGGGCT.................................272.000.00-2.00----------------------------------------------------------------------------
....................................................................................................................................................................................................GCTCACTGCAACCCCTGCCCTGG...............................231.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................TATCGCCCAGGCTGGAGTGCAGTGACGG.............................................................2801.002.00-1.00----------------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCAGTGTGCT.............................................................271.000.00-1.00----------------------------------------------------------------------------
..............................TGGCCCTGAAGAATGATG..........................................................................................................................................................................................................1811.001.00------------------------------------------------------1.00-----------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCGGC........................................................................................................281.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCTCGCAG.............................301.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCAC...............................291.000.001.00-----------------------------------------------------------------------------
.......................................................................................................................................TTTTTTTTGGAGACGGAGTCACGC...........................................................................................241.000.001.00-----------------------------------------------------------------------------
....................................................................................................................................TTTTTTTTTTTGGAGACGGAGGT...............................................................................................231.000.00-1.00----------------------------------------------------------------------------
.........................................................................................................................................................................AGGCTGGAGTGCAGTGGCAAGATCTCGGACCA.................................................321.000.00-1.00----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAGTA.....................................................................................................291.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTTTTC...........................................................................................................281.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCGACC...................................251.000.00-1.00----------------------------------------------------------------------------
.................................................................................................................................................................TATCGCCCAGGCTGGAGTGCAGGGTG...............................................................261.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCTCCTGGT............................311.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTCGG.........................................................................................................291.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................TCTATCGCCCAGGCTGGAGTGCAGTGTAG..............................................................291.000.00--1.00---------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCTAG........................................................................................................281.000.00-1.00----------------------------------------------------------------------------
.....................................................................................................................................TTTTTTTTTTGGAGACGGAGGT...............................................................................................221.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCACT....................................241.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCCCCG...............................291.000.00-1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCGCCC...................................241.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCGGGT...............................291.000.001.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................ACTGCAACCCCTGCCTCCTGGGCCC.........................251.000.00-1.00----------------------------------------------------------------------------
............................CATGGCCCTGAAGAATGATGAGATA.....................................................................................................................................................................................................251.000.00------------------------------------------------1.00-----------------------------
.................................................................................................................TGATTTGATTTTTTTTTTTTTTTTTTCTTG...........................................................................................................301.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTCTGG............................................................................................................241.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTCGC.............................................................................................................231.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTGCCT..............................301.000.00------1.00-----------------------------------------------------------------------
...................................................................................................................................TTTTTTTTTTTTGGAGACGGAGGCG..............................................................................................251.000.00-1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGCCTCCGGGG............................291.000.001.00-----------------------------------------------------------------------------
...................................................................................................................................TTTTTTTTTTTTGGAGACGTGGA................................................................................................231.000.001.00-----------------------------------------------------------------------------
........................................................................................................................................................................CAGGCTGGAGTGCAGTGGCAACCC..........................................................241.000.00-1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCGA......................................211.000.001.00-----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCAGC........................................................................................................281.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCTTCT................................281.000.00-1.00----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTAATG........................................................................................................301.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTGCCT..................................................................................................................211.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTCCT..............................................................................................................241.000.001.00-----------------------------------------------------------------------------
.......CAAAAACATCCATTACTTTC...............................................................................................................................................................................................................................201.000.00-----1.00------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCGG.................................271.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................CTCACTGCAACCCCTGCCTCCGGAT............................251.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTTGCC........................................................................................................301.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCAGAG............................321.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGCCTCCTGGGGTC.........................321.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCGGG.......................................................................................................291.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCGGG.....................................2301.002.001.00-----------------------------------------------------------------------------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTTGGAGCGAG...................................................................................................281.000.00-1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCTCCC................................271.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTCCCC...........................................................................................................271.000.001.00-----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTGGAACGG....................................................................................................321.000.00-1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................GCAAGATCTCGGCTCACTGC.............................................2001.001.00--------------------------------1.00---------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTCTC.............................................................................................................241.000.00-1.00----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTAAAA.......................................................................................................301.000.00------------1.00-----------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTCGGT............................................................................................................251.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTAATC........................................................................................................281.000.00------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................GCAAGATCTCGGCTCACTG..............................................1901.001.00---------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................CTCACTGCAACCCCTGCCCCAG...............................221.000.00-----------------------------------------------------------------------1.00------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTCTGC........................................................................................................281.000.00-1.00----------------------------------------------------------------------------
.....................................................................................................................................TTTTTTTTTTGGAGACGGAGGTTC.............................................................................................241.000.00-1.00----------------------------------------------------------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTTGGAGACGGGCTT...............................................................................................331.000.00-1.00----------------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCAGGGCC...............................................................251.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCCAC.............................311.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCTGG................................271.000.00-1.00----------------------------------------------------------------------------
..................................CCTGAAGAATGATGAGGTAAGCAGCTTGT...........................................................................................................................................................................................291.000.00--------1.00---------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCAGTGACGG.............................................................271.000.001.00-----------------------------------------------------------------------------
.................................CCCTGAAGAATGATGAGGTAAGCAGCTTGGAT.........................................................................................................................................................................................3211.001.00----------------------------------------------1.00-------------------------------
....................................TGAAGAATGATGAGGTAAGCAGCTTGGATATG......................................................................................................................................................................................3211.001.00--------1.00---------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCGA...............................291.000.00-1.00----------------------------------------------------------------------------
...........................TCATGGCCCTGAAGAATGAT...........................................................................................................................................................................................................2011.001.00--------------------------------------------------------------1.00---------------
..........................................................................................AGGTTTGAAGGAGCCTGG..............................................................................................................................................181.000.00---------------------------------------------------------------1.00--------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAAC......................................................................................................281.000.00-1.00----------------------------------------------------------------------------
.....................................................................................................................................TTTTTTTTTTGGAGACGGAGGCC..............................................................................................231.000.00-1.00----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTAAAG............................................................................................................271.000.001.00-----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTGCG........................................................................................................281.000.001.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................ACTGCAACCCCTGCCTCCTGGCTC..........................241.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTACGG........................................................................................................281.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTCAT.........................................................................................................291.000.00--1.00---------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCTT........................................................................................................281.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGCCTCCTGGGTG..........................311.000.001.00-----------------------------------------------------------------------------
.........................................................................................................................TTTTTTTTTTTTTTTTTTTTTTGGAGACTCTG.................................................................................................321.000.00-1.00----------------------------------------------------------------------------
................................................................................................................CTGATTTGATTTTTTTTTTG......................................................................................................................201.000.00-----------------------------------------1.00------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTCTC.........................................................................................................291.000.00--1.00---------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCGGCT....................................2401.002.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCCAC................................271.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTCTTT...............................................................................................................241.000.001.00-----------------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCAGTGGGTG.............................................................271.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTTCG.........................................................................................................291.000.00--1.00---------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCTCCCGC.............................301.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCTC........................................................................................................281.000.00-1.00----------------------------------------------------------------------------
.....................................................................................................................................................................................................CTCACTGCAACCCCTGCCTCCTGGGTTCAATCC....................331.000.00--1.00---------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTTTTTCGAG.......................................................................................................321.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCGGGG............................321.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCGGGC............................321.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCACGG.............................311.000.00-1.00----------------------------------------------------------------------------
..................................................................................................................................................................................TGCAGTGGCAAGATCTCGGAAT..................................................221.000.00----------------------------------------------------------------------1.00-------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTCCCT..................................261.000.001.00-----------------------------------------------------------------------------
...................................................................................................................................................................................GCAGTGGCAAGATCTCGGCTCAAA...............................................241.000.00------------------1.00-----------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTCAT...................................221.000.00---1.00--------------------------------------------------------------------------
..............................TGGCCCTGAAGAATGATGAGATA.....................................................................................................................................................................................................2311.002.00-----------1.00------------------------------------------------------------------
........................................................................................................................................................................................................ACTGCAACCCCTGCCTCCTGGGCTCT........................261.000.00----------------------------------1.00-------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCAGCG............................321.000.00-1.00----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTCGC............................................................................................................271.000.001.00-----------------------------------------------------------------------------
.................................................................................................................TGATTTGATTTTTTTTTTTTTCCTT................................................................................................................251.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTAAAC............................................................................................................261.000.001.00-----------------------------------------------------------------------------
................................................................................................................................................................CTATCGCCCAGGCTGGAGAG......................................................................201.000.00----------------------------------------------------1.00-------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAAAAG....................................................................................................301.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGGGA..................................251.000.001.00-----------------------------------------------------------------------------
.................................................................................................AAGGAGCCATTGATACTGATTTG..................................................................................................................................2311.001.00-----------------------------------------------1.00------------------------------
.......................................................................................................................................................................................TGGCAAGATCTCGGCTCAAA...............................................201.000.00----------------------1.00-------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGCCCTGG...............................281.000.001.00-----------------------------------------------------------------------------
......................CTATTTCATGGCCCTCACC.................................................................................................................................................................................................................191.000.00------------------------------1.00-----------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGAGC..................................251.000.00------1.00-----------------------------------------------------------------------
......................................................................................................GCCATTGATACTGATGT...................................................................................................................................171.000.00-----------------------------------------------------------1.00------------------
.............................................................................................................ATACTGATTTGATTTTTTTTTTTTTTTTTG...............................................................................................................301.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCCGTG............................321.000.001.00-----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAACG.....................................................................................................291.000.001.00-----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAAGG.....................................................................................................291.000.001.00-----------------------------------------------------------------------------
................................................................................................................................TTTTTTTTTTTTTTTGGAGACGGAGGCGC.............................................................................................291.000.001.00-----------------------------------------------------------------------------
................................................................................................................................................................................................CTCGGCTCACTGCAACCCCTGCCTCCCATG............................301.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTCGGG.......................................................................................................301.000.001.00-----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGATCA.....................................................................................................291.000.00--1.00---------------------------------------------------------------------------
...........................................................................................................................TTTTTTTTTTTTTTTTTTTTGGAGACGGTGG................................................................................................311.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTGTTC............................................................................................................261.000.00--1.00---------------------------------------------------------------------------
.................................................................................................................TGATTTGATTTTTTTTTTTTTTTTTGC..............................................................................................................271.000.001.00-----------------------------------------------------------------------------
.......................................................................................................................GATTTTTTTTTTTTTTTTTTTTTCTCC........................................................................................................271.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCAG........................................................................................................281.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCAG.................................271.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTCTTA...............................................................................................................241.000.00------1.00-----------------------------------------------------------------------
..............................................................................................................................TTTTTTTTTTTTTTTTTGGAGACGGAGGACG.............................................................................................311.000.001.00-----------------------------------------------------------------------------
..................................................................................................................................................................................................CGGCTCACTGCAACCCCTGCCTCCGGCT............................281.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTACT.........................................................................................................291.000.00-1.00----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAAGAG....................................................................................................301.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCATC....................................231.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGTAGA.................................241.000.00------------------------------------1.00-----------------------------------------
.......................................................................................................................................TTTTTTTTGGAGACGGAGTCTCGCGCAG.......................................................................................281.000.00-1.00----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTCTCC........................................................................................................301.000.00---------------------------------------------------------------------1.00--------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTGGTTCC.....................................................................................................311.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................TTTTTTTTTTTTTTTTGGAGACGGGGGC...............................................................................................281.000.001.00-----------------------------------------------------------------------------
.........................................................................................................................TTTTTTTTTTTTTTTTTTTTTTGGAGCGC....................................................................................................291.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................TTTTTTTTTTTTTTTTTGGAGACGGAGGCG..............................................................................................301.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCCACG............................321.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................TATCGCCCAGGCTGGAGTGCAGCCG................................................................251.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTCCT........................................................................................................291.000.00------------1.00-----------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTCGAG.............................................................................................................261.000.00-1.00----------------------------------------------------------------------------
...............................................................................................................................................................TCTATCGCCCAGGCTGGAGTGCAGTGAGCC.............................................................301.000.00--------------------1.00---------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCCTTG.............................311.000.001.00-----------------------------------------------------------------------------
...................................CTGAAGAATGATGAGGTAAGCAGC...............................................................................................................................................................................................2411.001.00--------------------------------------------1.00---------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTCCA........................................................................................................281.000.001.00-----------------------------------------------------------------------------
............................................................................................................................................................................................AGATCTCGGCTCACTGCAACCCCCCCC...................................271.000.00-1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................GCTCACTGCAACCCCTGCCTTGGG..............................241.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTACC.........................................................................................................281.000.001.00-----------------------------------------------------------------------------
........................................................................................................................................................................................GGCAAGATCTCGGCTCACT...............................................1901.001.00------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGCCTCCTGGACT..........................311.000.00-1.00----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTCGC..............................................................................................................241.000.001.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCACCG...................................241.000.00-1.00----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTCGG.............................................................................................................251.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTTTC............................................................................................................271.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCAGG....................................211.000.00-1.00----------------------------------------------------------------------------
..................................................................................................................................TTTTTTTTTTTTTGGAGACGGAGTCCCCC...........................................................................................291.000.00-1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................TCTCGGCTCACTGCAACCCCTGGGT..................................251.000.00-1.00----------------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCAGTGTCCC.............................................................271.000.001.00-----------------------------------------------------------------------------
......................................................................................................................................................................CCCAGGCTGGAGTGCAGTGGCAATTAG.........................................................271.000.00-------------------1.00----------------------------------------------------------
......................................................................................................................................................................................................TCACTGCAACCCCTGCCTCCTGGACG..........................261.000.00-1.00----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTGGC.............................................................................................................261.000.00-1.00----------------------------------------------------------------------------
......................CTATTTCATGGCCCTGAAGAATGATG..........................................................................................................................................................................................................2611.001.00--------1.00---------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTCGGC............................................................................................................241.000.001.00-----------------------------------------------------------------------------
...............................................................................................................ACTGATTTGATTTTTTTTTTTTTTTTTCTTG............................................................................................................311.000.001.00-----------------------------------------------------------------------------
..............................TGGCCCTGAAGAATGATGAGA.......................................................................................................................................................................................................2111.002.00--------------------1.00---------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTGGG........................................................................................................291.000.001.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................TCGGCTCACTGCAACCCCTGCCTCCTGGATCC.........................321.000.001.00-----------------------------------------------------------------------------
.............................................................................................................ATACTGATTTGATTTTTTTTTTTTTTTTTCTTG............................................................................................................331.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTTTTAAAG........................................................................................................311.000.001.00-----------------------------------------------------------------------------
..........................................................................................................................TTTTTTTTTTTTTTTTTTTTTGGAGACGGGCC................................................................................................321.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCTCACG..............................301.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCAGGG...................................251.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTATTT............................................................................................................271.000.00-1.00----------------------------------------------------------------------------
..................................................................................................................................................................ATCGCCCAGGCTGGAGTGCCGAC.................................................................231.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTTGGGC.......................................................................................................311.000.001.00-----------------------------------------------------------------------------
.................................................................................................................TGATTTGATTTTTTTTTTTTTTTTTTTTCTTG.........................................................................................................321.000.00-1.00----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTCG.........................................................................................................281.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTAACC............................................................................................................271.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTCTTA.............................................................................................................261.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTCCC.............................................................................................................251.000.001.00-----------------------------------------------------------------------------
.............................................................................................................ATACTGATTTGATTTTTTTTTTTTTTTTTT...............................................................................................................3011.001.001.00-----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAGCC.....................................................................................................291.000.001.00-----------------------------------------------------------------------------
....................................................................................................................................................................................CAGTGGCAAGATCTCGGCTCAAAA..............................................241.000.00------------------1.00-----------------------------------------------------------
.......................................................................................................................GATTTTTTTTTTTTTTTTTTTTTCCAC........................................................................................................271.000.001.00-----------------------------------------------------------------------------
...........................TCATGGCCCTGAAGAATGATGAGA.......................................................................................................................................................................................................241.000.00--------------------------1.00---------------------------------------------------
.....................................................................................................................................................................................................CTCACTGCAACCCCTGCCTCCTGGGCC..........................271.000.001.00-----------------------------------------------------------------------------
...................................CTGAAGAATGATGAGGTAAGCA.................................................................................................................................................................................................2211.001.00-----------1.00------------------------------------------------------------------
..............................................................................................................................................TGGAGACGGAGTCTCGCTCTTAA.....................................................................................231.000.00-------------------------------------------------------------1.00----------------
.......................................................................................................................................................................................................................TCCTGGGTTCAAGAGATTGTG..............211.000.001.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................GCTCACTGCAACCCCTGCCCGGG...............................231.000.001.00-----------------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTCCC..............................................................................................................241.000.001.00-----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTCTGC............................................................................................................241.000.001.00-----------------------------------------------------------------------------
..................................................................................................................................TTTTTTTTTTTTTGGAGACGGAGGCG..............................................................................................261.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCTCCTGGGTTCAAGAGATTCTCCGCT..........271.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCGCCC...................................251.000.00-1.00----------------------------------------------------------------------------
.......................................................................................................................................TTTTTTTTGGAGACGGAGGCGC.............................................................................................221.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTACG.........................................................................................................271.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTCCCC.............................................................................................................261.000.00-1.00----------------------------------------------------------------------------
..................................................GTAAGCAGCTTGGATATGTTTGCCTTGAA...........................................................................................................................................................................2911.001.00-------------------------------1.00----------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTGCCT............................................................................................................271.000.001.00-----------------------------------------------------------------------------
.............................................................................................................................TTTTTTTTTTTTTTTTTTGGAGCGAG...................................................................................................261.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................TCACTGCAACCCCTGCCTCCGGCC............................241.000.001.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................TCACTGCAACCCCTGCCTCCGGGC............................241.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTCCCA..................................261.000.00-1.00----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTCAG................................................................................................................231.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTTGCAT.......................................................................................................301.000.001.00-----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCCCGGG...............................291.000.001.00-----------------------------------------------------------------------------
.....................................................................................................................TTGATTTTTTTTTTTTTTTTTTTTTCGG.........................................................................................................281.000.00-1.00----------------------------------------------------------------------------
......................................................................................................................TGATTTTTTTTTTTTTTTTTTTTTTGGAGAGT....................................................................................................321.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTTTCTGG.........................................................................................................301.000.001.00-----------------------------------------------------------------------------
........................................................................................................................ATTTTTTTTTTTTTTTTTTTTTTGGAAGGG....................................................................................................301.000.001.00-----------------------------------------------------------------------------
...................................................................................................................ATTTGATTTTTTTTTTTTTTTTTTCTGC...........................................................................................................281.000.001.00-----------------------------------------------------------------------------
................................................................................................................................................................CTATCGCCCAGGCTGGAGGGTG....................................................................221.000.00--------------------------------------1.00---------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGTTT..................................261.000.00------1.00-----------------------------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTCCCC..........................................................................................................281.000.00-1.00----------------------------------------------------------------------------
.................................CCCTGAAGAATGATGAG........................................................................................................................................................................................................1750.600.60--------------------------------------------------------------------------0.40--0.20
...............TCCATTACTATTTCATG..........................................................................................................................................................................................................................1720.500.50----------------------------0.50-------------------------------------------------
................................GCCCTGAAGAATGATGA.........................................................................................................................................................................................................1720.500.50-------------------------------------------------------------------------0.50----
...............................................GAGGTAAGCAGCTTGG...........................................................................................................................................................................................1620.500.50------------------------------------------------------------------------0.50-----
..................................................................................................AGGAGCCATTGATACTG.......................................................................................................................................1730.330.33---------------------------------------------------------------------------0.33--
..............................................................................AACAGATCTGTTAGGT............................................................................................................................................................1630.330.33-----------------------------0.33------------------------------------------------
....................................................................................................................TTTGATTTTTTTTTTTTTTTTTTTTTTGGAGAC.....................................................................................................3330.330.33-0.33----------------------------------------------------------------------------
.............................ATGGCCCTGAAGAATG.............................................................................................................................................................................................................1650.200.20--------0.20---------------------------------------------------------------------

Antisense strand
CACGAAACAAAAACATCCATTACTATTTCATGGCCCTGAAGAATGATGAGGTAAGCAGCTTGGATATGTTTGCCTTGAAACAGATCTGTTAGGTTTGAAGGAGCCATTGATACTGATTTGATTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGGCAAGATCTCGGCTCACTGCAACCCCTGCCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCTTCC
............................................................................................................................................((((....))))(((.(((((((..((....)))))))))....)))...............................................................
.................................................................................................................114........................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029127(GSM416756)
A549. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR189782SRR189786SRR038853(GSM458536)
MELB. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343334SRR029124(GSM416753)
HeLa. (hela)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR029131(GSM416760)
MCF7. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189785DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAGCTTCTTA 245.000.00----2.00--3.00----------------------------------------------------------------------
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAGCTTCTTAA 253.000.00-------1.00---------2.00------------------------------------------------------------
.............................................................................................................................................................GCTCTATCGCCCAGGCTGGAGTGCATCTG................................................................ 292.000.00---------------------2.00--------------------------------------------------------
.............................................................................................................................................................GCTCTATCGCCCAGGCTGGAGTTCTG................................................................... 262.000.00-------------1.00----------------------------------------------1.00-----------------
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAGCTTCCTTA 252.000.00---------------------------2.00--------------------------------------------------
..............................................................................................................................................................................GGAGTGCAGTGGCAAGGGC......................................................... 192.000.002.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAGCTTCTTTA 252.000.00----2.00-------------------------------------------------------------------------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGATGGGC...................................................... 262.000.002.00-----------------------------------------------------------------------------
.............................................................................................................................................................GCTCTATCGCCCAGGTCTG.......................................................................... 192.000.00-------------1.00------------1.00---------------------------------------------------
........................................................................................................................................................................CAGGCTGGAGTGCAGTGGCAAAAG.......................................................... 241.000.00-----------------------------------------------------------------1.00------------
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAATAG.. 201.000.00-----1.00------------------------------------------------------------------------
............................................................................................................................................................................CTGGAGTGCAGTGGCAAGATCTCGGATC.................................................. 281.000.00-1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAGCTTCCTTAA 261.000.00--------------------------------------------------------1.00---------------------
.........................................................................................................................................................TCTCGCTCTATCGCCCAGGCTACCC........................................................................ 251.000.001.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................................CTGGGTTCAAGAGATTCTCAAGG.......... 231.000.00----------1.00-------------------------------------------------------------------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGACGGC....................................................... 251.000.001.00-----------------------------------------------------------------------------
..........................................................................................................................................................CTCGCTCTATCGCCCAGGCTGGAGTGCAGCC................................................................. 311.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................ATCTCGGCTCACTGCAACCCCTGCTGG................................. 271.000.00----------------------1.00-------------------------------------------------------
....................................................................................................................................................................................................GCTCACTGCAACCCCTGCCTCCTGTCTG.......................... 281.000.00----------------1.00-------------------------------------------------------------
.............................................................................................................................................................GCTCTATCGCCCAGGCTGGAGTCTG.................................................................... 251.000.00---------------------------------------1.00--------------------------------------
................................................................................................................................................................................................................CCCTGCCTCCTGGGTTCACG...................... 201.000.00----------------------------------------1.00-------------------------------------
..................................................................................................................................................................................................................................AGAGATTCTCCTGCCTCAGAAA.. 221.000.00-----------------------------------------------------1.00------------------------
..................................................................................................................................................................................................................................AGAGATTCTCCTGCCTCGGAA... 211.000.00---------------------------------------------------1.00--------------------------
..................................................................................................................................................................................................................TCTTGAACCCAGGAGGCAG..................... 1901.001.00---------1.00--------------------------------------------------------------------
..........................................................................................................................................................................................CAAGATCTCGGCTCACTGCAAAAAA....................................... 251.000.00----1.00-------------------------------------------------------------------------
..............................................................................................................................................................................GGAGTGCAGTGGCAAGATCTC....................................................... 211.000.001.00-----------------------------------------------------------------------------
...................................................................................................................................................ACGGAGTCTCGCTCTATCGCCCAGGCTTT.......................................................................... 291.000.00--------------------------------------------------1.00---------------------------
.........................................................................................................................................................................................................................CTGGGTTCAAGAGATTCTCCTGTAT........ 251.000.00-----1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGAGATTCTCCTGCCTAAA..... 191.000.00-----------------------------------1.00------------------------------------------
........................................................................................................................................................TGGGCGATAGAGCGAGAC................................................................................ 1801.001.00----------1.00-------------------------------------------------------------------
.......................................................................................................................................................CTCCAGCCTGGGCGATAGAGCGAGACT........................................................................ 2701.001.00----------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................................TTCTCCTGCCTCAGCTTGGCC 211.000.001.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................CACTGCAACCCCTGCCTCCTGGGTTCATAG..................... 301.000.00-----------------------------1.00------------------------------------------------
...........................................................................................................................................................................................................................GGGTTCAAGAGATTCTCCTGCGCT....... 241.000.00-------------------------------------1.00----------------------------------------
.................CATTACTATTTCATGAAAA...................................................................................................................................................................................................................... 191.000.00--1.00---------------------------------------------------------------------------
......ACAAAAACATCCATTCGTT................................................................................................................................................................................................................................. 191.000.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................CTTGAACCCAGGAGGCAGGGGT...................... 2201.001.00---------------1.00--------------------------------------------------------------
.............................................................................................................................................................GCTCTATCGCCCAGGCTCTG......................................................................... 201.000.00---------------------------------------------------------1.00--------------------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGATCTGGGC.................................................... 281.000.001.00-----------------------------------------------------------------------------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGCTGA........................................................ 241.000.00-----1.00------------------------------------------------------------------------
.............................................................................................................................................................................................................AACCCCTGCCTCCTGCCC........................... 181.000.00---------------------------------------------1.00--------------------------------
....................................................................................................................................................................................................................................AGATTCTCCTGCCTCAGCTAAAA 231.000.00----------------------------------------------------------------1.00-------------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGGGC......................................................... 231.000.001.00-----------------------------------------------------------------------------
........................................................................................................................................................GTCTCGCTCTATCGCCCAGC.............................................................................. 201.000.00---------------1.00--------------------------------------------------------------
.............................................................................................................................................................................TGGAGTGCAGTGGCAAC............................................................ 171.000.00-------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................CCCCTGCCTCCTGGGTTCAAGAGC................... 241.000.00-----------1.00------------------------------------------------------------------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGAGGGC....................................................... 251.000.001.00-----------------------------------------------------------------------------
.......................................................................................................................................................................................................CACTGCAACCCCTGCTGCG................................ 191.000.00------------------------------------------------------------------1.00-----------
..........................................................................................................................................................................GGCTGGAGTGCAGTGGCAAGGGT......................................................... 231.000.001.00-----------------------------------------------------------------------------
.............................................................................................................................................................GCTCTATCGCCCAGGCTGTCTG....................................................................... 221.000.00-------------1.00----------------------------------------------------------------
.......................................................AACATATCCAAGCTG.................................................................................................................................................................................... 1540.250.25----------------------------------------------------------------------------0.25-