ID: uc003cop.1_intron_17_0_chr3_45559565_f.3p
GENE: LARS2(18)
chr3:45561511-45561760+


(1)
AGO1.ip OTHER.mut
(1)
AGO2.ip
(19)
B-CELL
(7)
BRAIN
(14)
BREAST
(24)
CELL-LINE
(1)
FIBROBLAST
(6)
HEART
(2)
HELA
(1)
KIDNEY
(3)
LIVER
(3)
OTHER
(36)
SKIN
(1)
TESTES
(3)
UTERUS
(1)
XRN.ip

Sense strand
AACAGTGGAAACAGTGTTGACTTTGAATTTTAAAATATTTGTGTAGATGAAACATAGCGATTATTTGAGATAGTAGATATATTTATAAATATCTTTGCATCCCATTCATTTTCCTTTTTTTTTGTTTTGATAATTCAGTCTTTTTGTGGAAAGCTTAAAAGAATTTTGAAATAAGTAAATAATTGAACCTTTACTAATAGGTGACCACCCATTTCACAGAGGACTTCTCACTGAATTCTGCAATTTCTCA
.................................................................((.(((.(((((.(((((....))))).)))))))).))..................................................................................................................................................
............................................................61......................................................................133...................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR189785SRR189782SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343337SRR343336SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343335TAX577742(Rovira)
total RNA. (breast)
SRR189787SRR343334SRR189786GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
TAX577590(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577588(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
............................................................................................................TTTTCCTTTTTTTTTGTTGGC.........................................................................................................................218.000.00--2.00----6.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................CATCCCATTCATTTTCCTTTTTTTTG...............................................................................................................................263.000.001.00-----1.00----1.00----------------------------------------------------------------------------------------------------------------------
..........................................................................................................CATTTTCCTTTTTTTTTAAG............................................................................................................................203.000.001.00---------1.001.00----------------------------------------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATATTAG.....................................................................................................................................................................202.000.00-----2.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................AAAGAATTTTGAAATAAGTGAAA......................................................................232.000.00---2.00------------------------------------------------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATAATAG.....................................................................................................................................................................202.000.00-----2.00----------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................TTTTTGTGGAAAGCTTAAAA..........................................................................................2012.002.00--------------------------------------------2.00-------------------------------------------------------------------------------------
...............................................................................................................TCCTTTTTTTTTGTTGGCT........................................................................................................................192.000.00--1.00----1.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................TTCCTTTTTTTTTGTTGGC.........................................................................................................................192.000.00-------2.00--------------------------------------------------------------------------------------------------------------------------
............................................................................................................TTTTCCTTTTTTTTTGTTTTTCG.......................................................................................................................232.000.00-------2.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................TTTCCTTTTTTTTTGTTGGC.........................................................................................................................202.000.00-------2.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................TCCTTTTTTTTTGTTGGC.........................................................................................................................182.000.00-------2.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................TTCCTTTTTTTTTGTCGGC.........................................................................................................................192.000.00-------2.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................CATTTTCCTTTTTTTTTG..............................................................................................................................1861.171.170.17-----0.50---0.330.17----------------------------------------------------------------------------------------------------------------------
................................................................................................................CCTTTTTTTTTGTTTTGAC.......................................................................................................................191.000.00---------------------------------------------1.00------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATAA........................................................................................................................................................................171.000.00----------------------------------------------------------------1.00-----------------------------------------------------------------
.................................................................TGAGATAGTAGATATAG........................................................................................................................................................................171.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
.......................................................................................................ATTCATTTTCCTTTTTTTTTTG.............................................................................................................................221.000.00------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATTTTG......................................................................................................................................................................191.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
........................................................................................................TTCATTTTCCTTTTTTTTAATG............................................................................................................................221.000.00------------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................TTTCCTTTTTTTTTGGCTG..........................................................................................................................191.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATTATA......................................................................................................................................................................191.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................................TCCTTTTTTTTTGTTGGCC........................................................................................................................191.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
............................................................................................................TTTTCCTTTTTTTTTGTTTTCT........................................................................................................................221.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATAGTT......................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------1.00-----------------------------------------
......................................................................................................................................................................................................AGGTGACCACCCATTTCACAGAGGAC..........................2611.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------
.............................................................................................................TTTCCTTTTTTTTTGTTTTATTT......................................................................................................................231.000.00----------------------1.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................TCCTTTTTTTTTGTTCATC........................................................................................................................191.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................CTTTTTTTTTGTTTTGCCC......................................................................................................................191.000.00---------------------------------------------1.00------------------------------------------------------------------------------------
.............................................................................................................TTTCCTTTTTTTTTGTTGGCT........................................................................................................................211.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................TTCCTTTTTTTTTGTTTAGTT.......................................................................................................................211.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................CATCCCATTCATTTTCCTTTTTTG.................................................................................................................................241.000.00-----------1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTTA...201.000.00------------------------------------1.00---------------------------------------------------------------------------------------------
............................................................................................................TTTTCCTTTTTTTTTGTGTCC.........................................................................................................................211.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................TGAGATAGTAGATATTAG.......................................................................................................................................................................181.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CACAGAGGACTTCTCACTGAATTCTG..........2611.001.00--------------------------------------------------------------------------------1.00-------------------------------------------------
.........................................................................................................TCATTTTCCTTTTTTTTTTTAG...........................................................................................................................221.000.00------1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................CCTTTTTTTTTGTTTTGGGGC.....................................................................................................................211.000.00-------1.00--------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................TTCAGTCTTTTTGTGGAAAGCTTAAAAGAATTTTGAAATAAGTAAATAATTGAACCTTTACTAATAG..................................................6711.001.00-----------------------------------------------------------------------------------------------1.00----------------------------------
.................................................................................................CATCCCATTCATTTTCCTTTTTTTG................................................................................................................................251.000.00------1.00---------------------------------------------------------------------------------------------------------------------------
........................................................................................................TTCATTTTCCTTTTTTTTTG..............................................................................................................................2030.330.330.33---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................TCATTTTCCTTTTTTTTTG..............................................................................................................................1940.250.250.25---------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................AAAGCTTAAAAGAATTTAT..................................................................................1940.250.25---------------------------------------------------------------0.25------------------------------------------------------------------
.....................................................................................................................................................AAAGCTTAAAAGAATTT....................................................................................1740.250.25---------------------------------------------------------------------------------------------------------------------------0.25------
.......................................................................................................ATTCATTTTCCTTTTTTTT................................................................................................................................1960.170.17-----------0.17----------------------------------------------------------------------------------------------------------------------
............................................................................................................TTTTCCTTTTTTTTTGTTTTGC........................................................................................................................2270.140.14-------0.14--------------------------------------------------------------------------------------------------------------------------
............................................................................................................TTTTCCTTTTTTTTTGTTTTG.........................................................................................................................2170.140.14-----------0.14----------------------------------------------------------------------------------------------------------------------

Antisense strand
AACAGTGGAAACAGTGTTGACTTTGAATTTTAAAATATTTGTGTAGATGAAACATAGCGATTATTTGAGATAGTAGATATATTTATAAATATCTTTGCATCCCATTCATTTTCCTTTTTTTTTGTTTTGATAATTCAGTCTTTTTGTGGAAAGCTTAAAAGAATTTTGAAATAAGTAAATAATTGAACCTTTACTAATAGGTGACCACCCATTTCACAGAGGACTTCTCACTGAATTCTGCAATTTCTCA
.................................................................((.(((.(((((.(((((....))))).)))))))).))..................................................................................................................................................
............................................................61......................................................................133...................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR189785SRR189782SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343337SRR343336SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR343335TAX577742(Rovira)
total RNA. (breast)
SRR189787SRR343334SRR189786GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
TAX577590(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
TAX577579(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577588(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
SRR038859(GSM458542)
MM386. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTATCA. 22445.000.0094.50129.5046.0035.0058.0022.5010.009.004.005.001.003.001.001.508.503.003.000.50-1.50--1.001.50----0.501.00-----0.50-------0.50---------0.50-----0.50-----0.50-----1.00------------0.50------------------------0.50--------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATCA.... 19379.000.00133.00113.0018.0019.0011.001.0023.005.0011.006.007.009.004.00-1.003.002.00-7.00-1.00-2.00-------2.00--------------------------------------1.00------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAAATCA... 20348.000.00114.0089.0037.0033.0010.0010.009.003.003.001.008.003.005.00-1.003.002.00--1.00-1.002.00-----3.001.00---------1.00--1.00-----2.00----------------------------1.00-----1.00-1.00---1.00---1.00------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATATCA.. 21252.500.0080.5064.0020.0029.0016.5016.5011.001.500.50-1.002.500.50-2.500.500.50------1.50-----0.50---------1.50---------------------------1.00-------------------------------------------0.50----0.50-------------
....................................................................................................................................................................................................................................AATTGCAGAATTCAGTG..... 17534.6034.60--0.20-0.400.20--1.802.60--0.609.80-1.20-2.40-0.800.600.60--2.800.80----0.600.40-1.402.20-----0.20--0.60--------0.20-----------0.200.200.60-------0.40---------------------0.200.200.20-0.600.60-------------------0.40--0.200.200.20---
...................................................................................................................................................................................................................................AATTGCAGAATTCAGTGA..... 18224.0024.00----0.501.00------0.500.500.500.50-2.50-1.501.50--0.50-1.50-----1.001.000.500.50--0.500.50-0.500.501.00----1.00------0.50---1.50------0.50----0.50-----------0.50----------------0.50----0.50------------0.50-0.500.50---------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTAT... 2019.000.00----5.001.00--0.500.50---0.50------0.50----0.503.00-----1.00----0.50------------0.50----0.50-0.50---0.50--------------0.50-----0.50-0.50-----1.00------0.50----------0.50---0.50-----------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAAATC.... 1915.000.00----1.00---4.002.00-----------1.00-----2.00----------2.00-----------1.00------------------------1.00----------------1.00-------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTATC.. 2114.500.00---1.001.502.50--0.500.50---0.50-------0.50--0.500.50-0.50----0.50----------------0.50--0.50--1.000.50---0.50---------0.50-----------------------------------0.500.50--0.50--0.50----------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATC..... 1814.000.00----1.00---1.001.00----------1.002.00-------------------1.00--------------1.001.00----1.00----------1.00----1.00-------1.001.00------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATATC... 2012.500.00---1.002.00------------------1.50-------------0.50-----------1.00---0.501.00----0.50-0.500.50-----1.00----------1.00--------------0.50-------0.500.50--------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTA.... 1912.000.00-0.50-1.003.001.00--0.501.00--0.500.50-----1.50---------------0.50----------0.501.00------------------------------------------------------------------0.50---------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATA..... 1810.500.00----1.00---1.003.50--------------0.50-------0.500.50---1.00-----0.50--1.00---------------------------------------------------0.50------0.50------------------------
...................................................................................................................................................................................................................................ATTGCAGAATTCAGTGA...... 17210.0010.00-----0.50--2.00------0.50-1.00--1.000.50---0.50-------0.50------0.500.50-0.50--------0.50-----------------------0.50-----------------0.50-0.50---------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATAT.... 197.000.00-----------------0.50-0.50----0.50-0.50--1.00-2.00---0.50----------0.50-----0.50-----------------------------------------------------------------0.50-----------
..................................................................................................................................................................................................................................CTCACTGAATTCTGCAATTTCA.. 224.000.002.00-1.00-------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAAACCA... 204.000.00---1.00------1.00----------------1.00------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................ATTGCAGAATTCAGTG...... 1654.004.00--------0.200.20--0.20-------0.200.40--------0.80---------0.200.20-------0.200.200.20----------------------0.60------------------------0.20----------------------0.20-------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATATTA.. 212.500.001.000.50-0.50---------------------------------------------------------0.50--------------------------------------------------------------------
....................................................................................................................................................................................................................................TTGCAGAATTCAGTG....... 1502.002.00------------------------------------1.00--------------------------------------------1.00------------------------------------------------
..................................................................................................................................................................................................................................CTCACTGAATTCTGCAATTCA... 212.000.00---1.00-1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTAACA. 221.500.00-0.50-0.500.50-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTATTA. 221.500.00--0.50----1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATCC.... 191.000.00------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTCACTGAATTCTGCAATC..... 191.000.00-----------------------------------1.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTCA... 201.000.001.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTT.... 191.000.00--1.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................AATTCTGCAATTTCTTGTG 191.000.00------------------------------------------------------------------------1.00---------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTATCT. 221.000.000.50----0.50----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTATAA. 221.000.00-----------------------------------------------------0.50-----0.50----------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATAC.... 191.000.001.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATACCA.. 211.000.000.50--------------------------------------------------0.50------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTA.... 191.000.001.00---------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................AAATTGCAGAATTCAGTGA.... 1911.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CTGAATTCTGCAATTCG... 171.000.00-------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATCT.... 191.000.00----------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATCTCA.. 211.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................TATTTATAAATATCTTGGA........................................................................................................................................................ 191.000.00---------------------------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAAATGA... 201.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAAATCG... 201.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
.ACAGTGGAAACAGTGCCGT...................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATAA.... 191.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................ATAAGTAAATAATTGACTTC............................................................ 201.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTATA.. 211.000.00----1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAAATTA... 201.000.00-1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATACC... 201.000.00---------------------------------------------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................AATTGCAGAATTCAGT..... 1671.001.00------------0.14-------0.29-----------------------------------------------------------------------------------------------------0.14----0.140.140.14
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATATA... 200.500.00-------------------------------------------------------------------------------------------------------------------0.50--------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATAACA.. 210.500.00--0.50-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTTTC.. 210.500.00-----0.50----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATATCG.. 210.500.00-----0.50----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTTTCT. 220.500.00-----0.50----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTAGCA. 220.500.00-----------------0.50----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTCTCA. 220.500.00-------0.50--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTTTCA. 220.500.00------------------------------------------------------------------0.50---------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTTCA.. 210.500.00-----0.50----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATAGCA.. 210.500.00-----0.50----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TCACTGAATTCTGCAATTAG... 200.500.00------------------------------------0.50---------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................AAATTGCAGAATTCAG.... 1680.120.12------------------------------------------0.12---------------------------------------------------------------------------------------