ID: uc003com.2_intron_5_0_chr3_45152334_r.3p
GENE: (3)
chr3:45152284-45152533-


(1)
B-CELL 		(12)
BREAST 		(11)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(5)
OTHER 		(1)
SKIN

Sense strand
TTTAATATTTACTCGCACACCACTGATGTGTCTGCATTCCCAATCTCTGCCTTGAGTCCAAATATACAGTATCTAGACCCACTGCTCAGGATCTGAGAACTGCAGTCATTTTTCCTACACCCCCACCCCTCGGCTGCAGACAACCAGGACAGGGTCTAATGGCTCCCTATTCTTTCTGGTTTGGGTTCCACTCCCACTAGGTCTGTGCATCATCGAGTCTGTGTTTGAGGGTGAAGGCTCAGCAACCCTG
.................................................................................................................((((.(((......(((.((.((....)).)))))...(((((....)))))............))).)))).................................................................
...........................................................................................................108..........................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormTAX577579(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR189783TAX577745(Rovira)
total RNA. (breast)		SRR189784TAX577738(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782TAX577744(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		SRR189787SRR037937(GSM510475)
293cand2. (cell line)		SRR189785TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................TCCTACACCCCCACCATC........................................................................................................................18967.000.00557.00319.0020.0019.0012.003.009.002.003.007.003.001.005.001.00-2.002.00-----------1.00-1.00--
................................................................................................................TCCTACACCCCCACCTTC........................................................................................................................18130.000.0088.0022.003.00-4.006.001.002.001.00-1.001.00-------1.00-------------
................................................................................................................TCCTACACCCCCACCAGC........................................................................................................................1824.000.008.007.003.00--1.00-1.002.00--1.00-1.00-------------------
................................................................................................................TCCTACACCCCCACCTGC........................................................................................................................1812.000.002.001.002.00--2.00--2.00--2.00--------1.00------------
................................................................................................................TCCTACACCCCCACCCTC........................................................................................................................1810.000.003.002.002.001.002.00----------------------------
................................................................................................................TCCTACACCCCCACCGTC........................................................................................................................183.000.002.00----1.00---------------------------
..............................................................................................................................................................................................................GCATCATCGAGTCTGAAG..........................181.000.00-----------------------------1.00---
................................................................................................................................................................................................................ATCATCGAGTCTGTGTTTGAGGGTGAAGGC............3011.001.00-------------------------------1.00-
...........................................................................................................................................................................................................TGTGCATCATCGAGTCTGT............................1911.001.00-------------------------1.00-------
...................................................................................................................................................................................................................ATCGAGTCTGTGTTTGAGGGTG.................2211.001.00---------------------------1.00-----
.................................................................................................................................................................................................................................TGAGGGTGAAGGCTCTT........171.000.00-----------------1.00---------------
......................................................................................................................ACCCCCACCCCTCGGGAG..................................................................................................................181.000.00--------------1.00------------------
................................................................................................................TCCTACACCCCCACCTAC........................................................................................................................181.000.00-1.00-------------------------------
..........................................................................................................................CCACCCCTCGGCTGCTCCT.............................................................................................................191.000.00-------1.00-------------------------
................................................................................................................TCCTACACCCCCACCTACC.......................................................................................................................191.000.00----------1.00----------------------
.................................................................................................................................................................................................................................TGAGGGTGAAGGCTCCGTG......191.000.00------------------1.00--------------
................................................................................................................TCCTACACCCCCACCAAC........................................................................................................................181.000.001.00--------------------------------
................................................................................................................TCCTACACCCCCACCCGC........................................................................................................................181.000.00-----1.00---------------------------
..................................................................................................................................................................CTCCCTATTCTTTCTTTTG.....................................................................191.000.00--------------------------------1.00

Antisense strand
TTTAATATTTACTCGCACACCACTGATGTGTCTGCATTCCCAATCTCTGCCTTGAGTCCAAATATACAGTATCTAGACCCACTGCTCAGGATCTGAGAACTGCAGTCATTTTTCCTACACCCCCACCCCTCGGCTGCAGACAACCAGGACAGGGTCTAATGGCTCCCTATTCTTTCTGGTTTGGGTTCCACTCCCACTAGGTCTGTGCATCATCGAGTCTGTGTTTGAGGGTGAAGGCTCAGCAACCCTG
.................................................................................................................((((.(((......(((.((.((....)).)))))...(((((....)))))............))).)))).................................................................
...........................................................................................................108..........................................................................185...............................................................
SizePerfect hitTotal NormPerfect NormTAX577579(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR189783TAX577745(Rovira)
total RNA. (breast)		SRR189784TAX577738(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782TAX577744(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		TAX577580(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		SRR189787SRR037937(GSM510475)
293cand2. (cell line)		SRR189785TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................................................................................CTACACCCCCACCCCTCCTC.................................................................................................................... 201.000.00----------------------1.00----------
.................................................................................................................CCTACACCCCCACCCCCCA...................................................................................................................... 191.000.00-----------1.00---------------------
............................................................................................................TTTTTCCTACACCCCAAA............................................................................................................................ 181.000.00---------------------1.00-----------
............................................................................................................................................................................................................................GTGTTTGAGGGTGAAGG............. 171.000.00-------1.00-------------------------
..................................................................................................................CTACACCCCCACCCCTGG...................................................................................................................... 181.000.00-----------------------1.00---------
.............................GAGATTGGGAATGCAGAC........................................................................................................................................................................................................... 1811.001.00------------------------1.00--------
......................................................................................................................................................................................................................................GTGAAGGCTCAGCAACAGG. 191.000.00--------------1.00------------------
.........................................................CCAAATATACAGTATTTTG.............................................................................................................................................................................. 191.000.00--------------------------1.00------
.....................................................................................................................CACCCCCACCCCTCGGCCTCG................................................................................................................ 211.000.00-------1.00-------------------------
...................................................................................................................TACACCCCCACCCCTCTATC................................................................................................................... 201.000.00----------1.00----------------------