ID: uc003coh.1_intron_7_0_chr3_45052886_f.5p
GENE: EXOSC7(8)
chr3:45052836-45053085+


(1)
AGO3.ip 		(2)
BRAIN 		(5)
BREAST 		(10)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(2)
HELA 		(1)
KIDNEY 		(2)
LIVER 		(4)
OTHER 		(1)
RRP40.ip 		(21)
SKIN 		(1)
TESTES 		(4)
UTERUS 		(2)
XRN.ip

Sense strand
CACATCAACTGCTCAACTGTGGATTGTTTTTTACTTTTCCTTTTAAACCGGTTCGTATATATTTTTCTTCGCTGTTACGAATTTACAGCAGCATTTGTACATGTAAAATTAAAGGCTATTTTCTGGTCTGGTTTGGTATGTCTAGAGTTCTTCAGTTGAAGCCAAGGCACCATTCAGTGACCCATCTGGGTCTGGCCCTTATCTAGTGAGTGGCAGACAAATCCAGAGCTCTGCCACCAAGGGAGACCCC
.................................................................................((((((...((....))...))))))......((((..........((((..((((..((((......((((....))))...)))))))).)))).(((((....))))).)))).....................................................
.................................................................................82....................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343336SRR037943(GSM510481)
293DcrTN. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR040012(GSM532897)
G648N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................AGCAGCATTTGTACAGG...................................................................................................................................................179.000.00-4.003.00-------2.00------------------------------------------------
.........................GTTTTTTACTTTTCCTTTTAAACCGGT......................................................................................................................................................................................................2717.007.007.00----------------------------------------------------------
....................GGATTGTTTTTTACTTTTCCTTTTAAACCGGT......................................................................................................................................................................................................3216.006.006.00----------------------------------------------------------
......................................................................................AGCAGCATTTGTACAGGG..................................................................................................................................................185.000.00-2.003.00--------------------------------------------------------
................................................................................ATTTACAGCAGCATTTGTACATG...................................................................................................................................................2314.004.00---4.00-------------------------------------------------------
.......................................................................................................TAAAATTAAAGGCTATTTTCTGG............................................................................................................................2314.004.00----2.00---2.00--------------------------------------------------
.................................................................................................................................................................................TGACCCATCTGGGTCGCCA......................................................194.000.00------------2.00----------------------------1.00------1.00----------
..............AACTGTGGATTGTTTTTTACTT......................................................................................................................................................................................................................2213.003.00-----3.00-----------------------------------------------------
...............................................................................AATTTACAGCAGCATTTGTACATG...................................................................................................................................................2412.002.00---2.00-------------------------------------------------------
.............................................................................................TTTGTACATGTAAAATTAAAGGCT.....................................................................................................................................2412.002.00----1.00------------1.00-----------------------------------------
..............................................................................................TTGTACATGTAAAATTAAAGGC......................................................................................................................................2212.002.00-----------------------------1.00--------1.00--------------------
............................TTTTACTTTTCCTTTTAAACC.........................................................................................................................................................................................................2112.002.00---------2.00-------------------------------------------------
.............................................................................................TTTGTACATGTAAAATTAAAGGC......................................................................................................................................2312.002.00--------------1.00------------------------------1.00-------------
...................................TTTCCTTTTAAACCGGTG.....................................................................................................................................................................................................182.000.00-----------2.00-----------------------------------------------
..............................................................................................TTGTACATGTAAAATTAAAGGCT.....................................................................................................................................2312.002.00-------------2.00---------------------------------------------
...........................................................TATTTTTCTTCGCTGCAG.............................................................................................................................................................................181.000.00-------1.00---------------------------------------------------
............................................................................................ATTTGTACATGTAAAATTAAAGGC......................................................................................................................................2411.001.00---------------1.00-------------------------------------------
...............................................................................AATTTACAGCAGCATTTGTACAC....................................................................................................................................................231.000.00-------1.00---------------------------------------------------
..........................................................ATATTTTTCTTCGCTGTTACGA..........................................................................................................................................................................2211.001.00---------------------1.00-------------------------------------
...............................................................................................................................................AGAGTTCTTCAGTTGACG.........................................................................................181.000.00-------------------------1.00---------------------------------
..........................................................................................................AATTAAAGGCTATTTTCTGGTAA.........................................................................................................................231.000.00------------------------1.00----------------------------------
.............CAACTGTGGATTGTTTTTT..........................................................................................................................................................................................................................1921.001.00----------------------------------------------------1.00------
....................................................TCGTATATATTTTTCTTCGCTGTT..............................................................................................................................................................................2411.001.00--------------------1.00--------------------------------------
.......................................................................................................TAAAATTAAAGGCTATTTTCT..............................................................................................................................2111.001.00------------------1.00----------------------------------------
.................................................................................................................................................AGTTCTTCAGTTGAACGAT......................................................................................191.000.00------------------------------1.00----------------------------
........CTGCTCAACTGTGGATTGTTT.............................................................................................................................................................................................................................2111.001.00------------------------------------------1.00----------------
.................TGTGGATTGTTTTTTACTTTTCCTTTTAAACC.........................................................................................................................................................................................................3211.001.00-----------------------------------------------------1.00-----
..............................................................................................TTGTACATGTAAAATTAAAGGCTA....................................................................................................................................2411.001.00--------------1.00--------------------------------------------
...............ACTGTGGATTGTTTTTTACTTCTC...................................................................................................................................................................................................................241.000.00------------------------------------1.00----------------------
......................................CCTTTTAAACCGGTTCGTATAT..............................................................................................................................................................................................2211.001.00---------------------------------1.00-------------------------
.........................................................TATATTTTTCTTCGCTGTTACGA..........................................................................................................................................................................2311.001.00----------------------------------1.00------------------------
..CATCAACTGCTCAACTGTGGAT..................................................................................................................................................................................................................................2211.001.00-----------------------------------------------1.00-----------
.............................................................................................TTTGTACATGTAAAATTAAAGG.......................................................................................................................................2211.001.00----------------------------1.00------------------------------
..........................TTTTTTACTTTTCCTTTTAAACC.........................................................................................................................................................................................................2311.001.00--------------------------1.00--------------------------------
......................ATTGTTTTTTACTTTTCCTTTTAAACCGGT......................................................................................................................................................................................................3011.001.00------------------------------------------------------1.00----
.........................................................TATATTTTTCTTCGCTGTTACG...........................................................................................................................................................................2211.001.00--------------------------------------------------1.00--------
.........................................................................................................AAATTAAAGGCTATTTTCT..............................................................................................................................1911.001.00-----------------------------------1.00-----------------------
....................................................TCGTATATATTTTTCTTCGCTGTTACG...........................................................................................................................................................................2711.001.00----------------------------------------1.00------------------
...........................................................................................................ATTAAAGGCTATTTTCTGG............................................................................................................................1911.001.00---------------------------1.00-------------------------------
.................................................................................................................................................................................TGACCCATCTGGGTCGACA......................................................191.000.00-----------------------1.00-----------------------------------
..............................................................................................................AAAGGCTATTTTCTGGTACAC.......................................................................................................................211.000.00--------------------------------------------1.00--------------
.......................................................................................................TAAAATTAAAGGCTATTTTCTGGTAAAA.......................................................................................................................281.000.00---------------1.00-------------------------------------------
.................................................................................................TACATGTAAAATTAAAGGCTATT..................................................................................................................................2311.001.00-------------------------------------1.00---------------------
...............................................................................................................................................AGAGTTCTTCAGTTGAAGATC......................................................................................211.000.00----------------------1.00------------------------------------
...........................................................TATTTTTCTTCGCTGCCAC............................................................................................................................................................................191.000.00-------------------------------------------1.00---------------
...............................................................................................TGTACATGTAAAATTAAAGGCT.....................................................................................................................................2211.001.00---------------------------------------------------1.00-------
...........................TTTTTACTTTTCCTTTTAAACC.........................................................................................................................................................................................................2211.001.00------1.00----------------------------------------------------
....TCAACTGCTCAACTGTGGAT..................................................................................................................................................................................................................................2011.001.00---------------------------------------1.00-------------------
......................................................GTATATATTTTTCTTCGCTGTTACGAATTTAC....................................................................................................................................................................3211.001.00----------------1.00------------------------------------------
................................................................................................GTACATGTAAAATTAAAGGCTATTTTC...............................................................................................................................2711.001.00------1.00----------------------------------------------------
...............................................................................................................AAGGCTATTTTCTGGTCAA........................................................................................................................191.000.00----------------------------------------------1.00------------
.........TGCTCAACTGTGGATTGTTTTTT..........................................................................................................................................................................................................................2311.001.00--------------------------------1.00--------------------------
..........................................................................................................................CTGGTCTGGTTTGGTGCG..............................................................................................................181.000.00-------------------------------------------------1.00---------
...............................................................................AATTTACAGCAGCATTTG.........................................................................................................................................................1820.500.50----------------0.50------------------------------------------
..................GTGGATTGTTTTTTACT.......................................................................................................................................................................................................................1720.500.50------0.50----------------------------------------------------
........CTGCTCAACTGTGGATT.................................................................................................................................................................................................................................1720.500.50-------------------------------------------------------0.50---
................CTGTGGATTGTTTTTTACT.......................................................................................................................................................................................................................1920.500.50--------------------------------------------------------0.50--
...........CTCAACTGTGGATTGTTTT............................................................................................................................................................................................................................1930.330.33----------------------------------------------------------0.33

Antisense strand
CACATCAACTGCTCAACTGTGGATTGTTTTTTACTTTTCCTTTTAAACCGGTTCGTATATATTTTTCTTCGCTGTTACGAATTTACAGCAGCATTTGTACATGTAAAATTAAAGGCTATTTTCTGGTCTGGTTTGGTATGTCTAGAGTTCTTCAGTTGAAGCCAAGGCACCATTCAGTGACCCATCTGGGTCTGGCCCTTATCTAGTGAGTGGCAGACAAATCCAGAGCTCTGCCACCAAGGGAGACCCC
.................................................................................((((((...((....))...))))))......((((..........((((..((((..((((......((((....))))...)))))))).)))).(((((....))))).)))).....................................................
.................................................................................82....................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189782SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR343336SRR037943(GSM510481)
293DcrTN. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR343335SRR040012(GSM532897)
G648N. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................................................................................GCCACCAAGGGAGACG.. 161.000.00-------------------1.00---------------------------------------
.............................................................TTTTTCTTCGCTGTTAA............................................................................................................................................................................ 171.000.00-------------------------------1.00---------------------------
.................................................................................................................................................................................................................TCTGGATTTGTCTGCCAC....................... 1820.500.50---------------------------------------------------------0.50-