uc003ckd.3_intron_9_0_chr3_40465455

GTTACAAATTCACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAAGAAGTAAGTTAAGCACAAATCATTTTCTCTTCTTCTTCCCAACAGAGAGGTTTGTATGTGTGTGTGGAACAAATGTAGAAGGTAAAAGGGTATTAATGAGTTAAACTCACTGGGTGGAAGCTGATCAGACTGATCCCTTGTGAGTTTCCCAGAAGAGGTCATGGAGAATTTAGAAGAGTTGCTCATGGGTATACATTCTCCTG
.................................................................................................(((.(((((.(((.....))).))))).)))....(((((.((((..(((.....))).(((..(((...)))..)))..)))))))))................................................................
................................................................................................97..........................................................................................189...........................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)

SRR040036(GSM532921)
G243N. (cervix)

TAX577739(Rovira)
total RNA. (breast)

TAX577740(Rovira)
total RNA. (breast)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR040037(GSM532922)
G243T. (cervix)

SRR040039(GSM532924)
G531T. (cervix)

TAX577745(Rovira)
total RNA. (breast)

TAX577741(Rovira)
total RNA. (breast)

TAX577738(Rovira)
total RNA. (breast)

TAX577746(Rovira)
total RNA. (breast)

SRR207111(GSM721073)
Whole cell RNA. (cell line)

SRR040038(GSM532923)
G531N. (cervix)

TAX577744(Rovira)
total RNA. (breast)

TAX577743(Rovira)
total RNA. (breast)

SRR040015(GSM532900)
G623T. (cervix)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)

SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)

SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)

SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

TAX577742(Rovira)
total RNA. (breast)

TAX577579(Rovira)
total RNA. (breast)

TAX577589(Rovira)
total RNA. (breast)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)

SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)

SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)

SRR189784

GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)

SRR040040(GSM532925)
G612N. (cervix)

SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)

SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)

SRR191575(GSM715685)
85genomic small RNA (size selected RNA from t. (breast)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040028(GSM532913)
G026N. (cervix)

SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)

SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)

SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)

SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)

SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)

SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

TAX577590(Rovira)
total RNA. (breast)

SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)

SRR343335

SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)

SRR038860(GSM458543)
MM426. (cell line)

SRR029130(GSM416759)
DLD2. (cell line)

SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191635(GSM715745)
9genomic small RNA (size selected RNA from to. (breast)

SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)

SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)

SRR191558(GSM715668)
61genomic small RNA (size selected RNA from t. (breast)

SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)

TAX577453(Rovira)
total RNA. (breast)

SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR191402(GSM715512)
43genomic small RNA (size selected RNA from t. (breast)

GSM532886(GSM532886)
G850T. (cervix)

SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)

SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)

SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)

SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR343337

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

....................................................................................................................................................................AAGCTGATCAGACTGATGTTG.................................................................

66.00

0.50

1.00

23.00

6.00

3.00

1.00

4.00

5.00

1.00

5.00

2.00

3.00

2.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTTG.................................................................

54.00

0.00

5.00

4.00

5.00

4.00

2.00

1.00

2.00

1.00

......................................................................................................................................................................GCTGATCAGACTGATGTTG.................................................................

38.00

0.00

32.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGGTG.................................................................

13.00

0.50

7.00

2.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATG....................................................................

6.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTT..................................................................

6.00

0.00

1.00

......................................................................................................................................................................GCTGATCAGACTGATGATG.................................................................

6.00

0.00

4.00

1.00

......................................................................................................................................................................GCTGATCAGACTGATGTT..................................................................

4.00

0.00

2.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGTT..................................................................

4.00

0.50

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGTGG.................................................................

4.00

0.50

1.00

2.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGT...................................................................

3.00

0.50

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGTTT.................................................................

3.00

0.50

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGT...................................................................

2.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATATTG.................................................................

2.00

0.50

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTGG.................................................................

2.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGCT..................................................................

2.00

0.50

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATG....................................................................

2.00

0.50

1.00

.....................................................................................................TATGTGTGTGTGGAACTCTG.................................................................................................................................

2.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTC..................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGCTG.................................................................

1.00

0.00

1.00

......................................................................................................................................................................GCTGATCAGACTGATGCT..................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGAGG.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATACTG.................................................................

1.00

0.50

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATCGTGA................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATCGT..................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATCCTT.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTTT.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGTTA.................................................................

1.00

0.50

1.00

......................................................................................................................................................................................................GAAGAGGTCATGGAGGCC..................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGA...................................................................

1.00

0.00

1.00

...................................................................................................................................................................GAAGCTGATCAGACTGATGTTG.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATATAG.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGAGG.................................................................

1.00

0.50

1.00

....................................................................................................................................................................AAGCTGATCAGACTGACCT...................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTAG.................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATT....................................................................

1.00

0.00

1.00

.........TCACAGAGGAGACTTGAGC..............................................................................................................................................................................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGTAG.................................................................

1.00

0.50

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGGGG.................................................................

1.00

0.50

1.00

.....................................................................................................................................................................................................AGAAGAGGTCATGGAGAAC..................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTTA.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGCTC.................................................................

1.00

0.50

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGGTG.................................................................

1.00

0.00

1.00

......................................................................................................................................................................GCTGATCAGACTGATGATT.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGTTC.................................................................

1.00

0.50

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTA..................................................................

1.00

0.00

1.00

...................................................................................................TGTATGTGTGTGTGGAACTCTG.................................................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................AGCTGATCAGACTGATGTGA.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGATGCTG.................................................................

1.00

0.50

1.00

............................................................................................................................................................CTGGGTGGAAGCTGAATG............................................................................

1.00

0.00

1.00

......................................................................................................................................................................GCTGATCAGACTGATGGTG.................................................................

1.00

0.00

1.00

....................................................................................................................................................................AAGCTGATCAGACTGAT.....................................................................

0.50

.............................................................................TCTTCTTCCCAACAGA.............................................................................................................................................................

0.17

....................................................................................................................................................................AAGCTGATCAGACTG.......................................................................

0.14