uc003cft.2_intron_25_0_chr3_33650119

ATACCTTTAATAACAAGCAATTGCACATCAAAATCAGTTCCCGTGAGGAGGTAAGTTTAATTTTTTGTTGTTGTTGTTGTTAGTATAGCTCTGATACTGCATTGTTTAATTATTTGTCTGCTGCAAGAATTGGTCATTCATTTCTTGCCTTCCAGAAAACCATAAAAAAGTGTTTTGTTTTGTTTTTTTAATCATATCTCATGTAAGGGAAAAGGGATGAAGTGATTATTATGACCACCCACTTTTCTTA ............................................................................................((((..(((((.............((((..(((((((.(((....))).)))))))....))))............)))))..))))....................................................................... ........................................................................................89.............................................................................................................200................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR029130(GSM416759) DLD2. (cell line)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	SRR189787	SRR040022(GSM532907) G575N. (cervix)	SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)
........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTCCCC..........................................................	24		35.00	0.00	13.00	22.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTCCC...........................................................	23		15.00	0.00	11.00	4.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTTCCCC.........................................................	25		6.00	0.00	4.00	2.00	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................................TGTTTTGTTTTGTTTTTTTAATCTC.......................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................AAGTGTTTTGTTTTGTTTTTTTAACCA........................................................	27		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-
......................GCACATCAAAATCAGTTCCCGTGAGGAG........................................................................................................................................................................................................	28	1	2.00	2.00	-	-	-	-	-	2.00	-	-	-	-	-	-
...........................................................................................................................................................................................................TAAGGGAAAAGGGATGAAGTGATT.......................	24	1	2.00	2.00	-	-	-	2.00	-	-	-	-	-	-	-	-
..........................................................................................................................................................................................TTTAATCATATCTCAAACC.............................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-
............................................................................................................................................................................TTTTGTTTTGTTTTTTTAATCATTTC....................................................	26		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-
.............................................................................................ATACTGCATTGTTTACATG..........................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	1.00	-	-	-	-
..........................................................AATTTTTTGTTGTTGTTGTTCCTG........................................................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................AAGTGTTTTGTTTTGTCATG...............................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTTAACC.........................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................CCGTGAGGAGGTAAGTTTA...............................................................................................................................................................................................	19	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	1.00	-
...........................................TGAGGAGGTAAGTTTAATTTTTTGTTGTTGTTG..............................................................................................................................................................................	33	1	1.00	1.00	-	-	-	-	1.00	-	-	-	-	-	-	-
........................................................................................................................................................................AGTGTTTTGTTTTGTTTTGCC.............................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-

ATACCTTTAATAACAAGCAATTGCACATCAAAATCAGTTCCCGTGAGGAGGTAAGTTTAATTTTTTGTTGTTGTTGTTGTTAGTATAGCTCTGATACTGCATTGTTTAATTATTTGTCTGCTGCAAGAATTGGTCATTCATTTCTTGCCTTCCAGAAAACCATAAAAAAGTGTTTTGTTTTGTTTTTTTAATCATATCTCATGTAAGGGAAAAGGGATGAAGTGATTATTATGACCACCCACTTTTCTTA
............................................................................................((((..(((((.............((((..(((((((.(((....))).)))))))....))))............)))))..)))).......................................................................
........................................................................................89.............................................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR029130(GSM416759)
DLD2. (cell line)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR189787

SRR040022(GSM532907)
G575N. (cervix)

SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTCCCC..........................................................

35.00

0.00

13.00

22.00

........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTCCC...........................................................

15.00

0.00

11.00

4.00

........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTTCCCC.........................................................

6.00

0.00

4.00

2.00

..........................................................................................................................................................................TGTTTTGTTTTGTTTTTTTAATCTC.......................................................

2.00

0.00

2.00

.......................................................................................................................................................................AAGTGTTTTGTTTTGTTTTTTTAACCA........................................................

2.00

0.00

2.00

......................GCACATCAAAATCAGTTCCCGTGAGGAG........................................................................................................................................................................................................

2.00

...........................................................................................................................................................................................................TAAGGGAAAAGGGATGAAGTGATT.......................

2.00

..........................................................................................................................................................................................TTTAATCATATCTCAAACC.............................................

1.00

0.00

1.00

............................................................................................................................................................................TTTTGTTTTGTTTTTTTAATCATTTC....................................................

1.00

0.00

1.00

.............................................................................................ATACTGCATTGTTTACATG..........................................................................................................................................

1.00

0.00

1.00

..........................................................AATTTTTTGTTGTTGTTGTTCCTG........................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................AAGTGTTTTGTTTTGTCATG...............................................................

1.00

0.00

1.00

........................................................................................................................................................................AGTGTTTTGTTTTGTTTTTTTAACC.........................................................

1.00

0.00

1.00

........................................CCGTGAGGAGGTAAGTTTA...............................................................................................................................................................................................

1.00

...........................................TGAGGAGGTAAGTTTAATTTTTTGTTGTTGTTG..............................................................................................................................................................................

1.00

........................................................................................................................................................................AGTGTTTTGTTTTGTTTTGCC.............................................................

1.00

0.00

1.00