uc003cdx.2_intron_0_0_chr3_27759243

CTGCCTCTGTTCTTTCAGCCCAACAGACCAGCACTTTCGGTGTAGATAACCAACACAAGCCTTTTTCATTTCTGGGAGGTGGTTTGTTTGGGGACAACATTAGGGTTTTTTTTTTTTTTTAAGTGTTTCTCTTTATATTGTAGCATGTACACCGCTTCAGAAAATGACAGGTTAACTCCATCTCCCACGGATTCTCCTAGATCCCATCAGATTGTCCCTGGAGGTCGGTACGGCGTTCAATCCTTCTTCC ......................................................((((((((((..((....))..))).)))))))(((....)))......................................................................................................................................................... ..................................................51.........................................................................126..........................................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189782	SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	TAX577740(Rovira) total RNA. (breast)	TAX577739(Rovira) total RNA. (breast)	GSM450608(GSM450608) miRNA sequencing raw reads from post-mortem s. (brain)	SRR189786	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR040043(GSM532928) G428T. (cervix)	SRR444056(SRX128904) Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
...................................................................................................TTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................	23		27.00	0.00	21.00	6.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTAC.................................................................................................................................	22		25.00	0.00	18.00	7.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................	26	1	15.00	1.00	13.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTAC..................................................................................................................................	22		12.00	0.00	8.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTCAC...............................................................................................................................	24		12.00	0.00	6.00	6.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTAC...................................................................................................................................	21		11.00	0.00	7.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................	24		10.00	0.00	7.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................	26		10.00	0.00	5.00	5.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTAC.................................................................................................................................	23		9.00	0.00	6.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................	24		8.00	0.00	5.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTAC..............................................................................................................................	28	3	7.33	1.00	4.67	2.67	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTCAC................................................................................................................................	24		7.00	0.00	3.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCAC...............................................................................................................................	25		7.00	0.00	2.00	5.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................	25		7.00	0.00	5.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTCAC................................................................................................................................	23		6.00	0.00	5.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTAC...............................................................................................................................	27	3	6.00	1.00	2.33	3.67	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................	25		6.00	0.00	3.00	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTTAGGAC.............................................................................................................................	24		5.00	0.00	1.00	4.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTCTAC.................................................................................................................................	22		5.00	0.00	-	5.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTACAG...............................................................................................................................	25		4.00	0.00	3.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTAC....................................................................................................................................	22		3.00	0.00	2.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTCAC...................................................................................................................................	21		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTC.................................................................................................................................	23		3.00	0.00	1.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTCAC..................................................................................................................................	22		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTACAG..............................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTCAC...................................................................................................................................	20		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTACAG...............................................................................................................................	24		2.00	0.00	1.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTACAG.................................................................................................................................	23		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTCCAC..............................................................................................................................	25		2.00	0.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTCCAC...............................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTACAG...................................................................................................................................	21		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTAC.................................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................	24		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTACAG.................................................................................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTCGGC.................................................................................................................................	21		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTCAC...............................................................................................................................	27	3	1.33	1.00	-	1.33	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTGCAC................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTACAG................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................AAGCCTTTTTCATTTCTCT...............................................................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTCTAC...................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTCTAG...............................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTCC................................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTACCGT.............................................................................................................................	29	1	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................................................................TTGTCCCTGGAGGTCGGTACGGCGTCC............	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTTATCTT.............................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTTTTTAC...............................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTC......................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTACC.................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTAA................................................................................................................................	26	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTA.......................................................................................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTTTTAATAT.............................................................................................................................	25		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTACT................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTCTCA..............................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTCAC..................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTAC...................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTAGCT...............................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................................................................CATCAGATTGTCCCTGGAGGTCGGTACG..................	28	1	1.00	1.00	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTATC................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTACAG...................................................................................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTCTTC.................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTACAC...............................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTAT.................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTCAA................................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTTC..............................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTCTTA...............................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTACAG....................................................................................................................................	22		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTCAC....................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTCTA..................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTTAGGA..............................................................................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................ATTTCTGGGAGGTGGTGGA....................................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTCTTC...............................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTT..................................................................................................................................	24	3	1.00	1.00	0.67	-	-	-	0.33	-	-	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTTAGG...............................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTGTAA.................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTTTTTTAT..............................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTGGA..................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTCAC..............................................................................................................................	28	3	1.00	1.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTCTAC..................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTAAGG...................................................................................................................................	20		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-
.................................................................................................................TTTTTTTAAGTGTTTCCTAT.....................................................................................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTTT..............................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTAC......................................................................................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTACGC.................................................................................................................................	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCCAC..............................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTTTTAAAG..............................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................CCCACGGATTCTCCTTTCG................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTCTC................................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTTTCAC................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTCTCC...............................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTA.................................................................................................................................	25	1	1.00	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTCTAC..................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCCCC..............................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................	27		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTTTTCC................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTAA..............................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................CCCACGGATTCTCCTTTTG................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................AGGTCGGTACGGCGTTCAA..........	19	1	1.00	1.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTTAGGT..............................................................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTCGGA..................................................................................................................................	21		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................CATTAGGGTTTTTTTTTTTTTTCCAC...............................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTTTACAG..............................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTATTGG.............................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................CCCACGGATTCTCCTTTCT................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................................................................CCCACGGATTCTCCTTTTT................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTTTATC................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTACAG..................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................TAGGGTTTTTTTTTTTTTTCGG................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTGCG...............................................................................................................................	24		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................................................................CTGGAGGTCGGTACGGCGTTCA...........	22	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTACCC.................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..................................................................................................ATTAGGGTTTTTTTTTTTTTGC..................................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTAC.....................................................................................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.....................................................................................................AGGGTTTTTTTTTTTTTTACGG...............................................................................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTA................................................................................................................................	26	3	0.67	1.00	0.67	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTA...............................................................................................................................	27	3	0.67	1.00	0.67	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTAAG...............................................................................................................................	24	2	0.50	0.50	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTAA................................................................................................................................	23	6	0.50	0.50	-	0.50	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTC.................................................................................................................................	25	3	0.33	1.00	-	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTAT...............................................................................................................................	27	3	0.33	1.00	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTC...............................................................................................................................	27	3	0.33	1.00	-	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTAC..................................................................................................................................	24	6	0.33	0.33	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTACAG................................................................................................................................	26	6	0.33	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTT....................................................................................................................................	22	6	0.33	0.33	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTCC..............................................................................................................................	28	3	0.33	1.00	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTTA..............................................................................................................................	28	3	0.33	1.00	-	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................	28	3	0.33	1.00	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTCCC..............................................................................................................................	28	3	0.33	1.00	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................TTAGGGTTTTTTTTTTTTTTTAAAG..............................................................................................................................	25	6	0.17	0.50	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-

CTGCCTCTGTTCTTTCAGCCCAACAGACCAGCACTTTCGGTGTAGATAACCAACACAAGCCTTTTTCATTTCTGGGAGGTGGTTTGTTTGGGGACAACATTAGGGTTTTTTTTTTTTTTTAAGTGTTTCTCTTTATATTGTAGCATGTACACCGCTTCAGAAAATGACAGGTTAACTCCATCTCCCACGGATTCTCCTAGATCCCATCAGATTGTCCCTGGAGGTCGGTACGGCGTTCAATCCTTCTTCC
......................................................((((((((((..((....))..))).)))))))(((....))).........................................................................................................................................................
..................................................51.........................................................................126..........................................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189782

SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

TAX577740(Rovira)
total RNA. (breast)

TAX577739(Rovira)
total RNA. (breast)

GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR189786

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR040043(GSM532928)
G428T. (cervix)

SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)

...................................................................................................TTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................

27.00

0.00

21.00

6.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTAC.................................................................................................................................

25.00

0.00

18.00

7.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................

15.00

1.00

13.00

2.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTAC..................................................................................................................................

12.00

0.00

8.00

4.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTCAC...............................................................................................................................

12.00

0.00

6.00

..................................................................................................ATTAGGGTTTTTTTTTTTTAC...................................................................................................................................

11.00

0.00

7.00

4.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................

10.00

0.00

7.00

3.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................

10.00

0.00

5.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTAC.................................................................................................................................

9.00

0.00

6.00

3.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................

8.00

0.00

5.00

3.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTAC..............................................................................................................................

7.33

1.00

4.67

2.67

..................................................................................................ATTAGGGTTTTTTTTTTTTTTCAC................................................................................................................................

7.00

0.00

3.00

4.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCAC...............................................................................................................................

7.00

0.00

2.00

5.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................

7.00

0.00

5.00

2.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTCAC................................................................................................................................

6.00

0.00

5.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTAC...............................................................................................................................

6.00

1.00

2.33

3.67

..................................................................................................ATTAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................

6.00

0.00

3.00

.....................................................................................................AGGGTTTTTTTTTTTTTTTAGGAC.............................................................................................................................

5.00

0.00

1.00

4.00

...................................................................................................TTAGGGTTTTTTTTTTTTCTAC.................................................................................................................................

5.00

0.00

5.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTACAG...............................................................................................................................

4.00

0.00

3.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTAC....................................................................................................................................

3.00

0.00

2.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTCAC...................................................................................................................................

3.00

0.00

3.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTC.................................................................................................................................

3.00

0.00

1.00

2.00

..................................................................................................ATTAGGGTTTTTTTTTTTTCAC..................................................................................................................................

2.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTACAG..............................................................................................................................

2.00

0.00

2.00

...................................................................................................TTAGGGTTTTTTTTTTTCAC...................................................................................................................................

2.00

0.00

2.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTACAG...............................................................................................................................

2.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTACAG.................................................................................................................................

2.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTCCAC..............................................................................................................................

2.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTCCAC...............................................................................................................................

2.00

0.00

2.00

..................................................................................................ATTAGGGTTTTTTTTTTACAG...................................................................................................................................

2.00

0.00

2.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTAC.................................................................................................................................

2.00

0.00

2.00

....................................................................................................TAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................

2.00

0.00

2.00

...................................................................................................TTAGGGTTTTTTTTTTTTACAG.................................................................................................................................

2.00

0.00

2.00

....................................................................................................TAGGGTTTTTTTTTTTTCGGC.................................................................................................................................

2.00

0.00

2.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTCAC...............................................................................................................................

1.33

1.00

1.33

...................................................................................................TTAGGGTTTTTTTTTTTTTGCAC................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTACAG................................................................................................................................

1.00

0.00

1.00

........................................................AAGCCTTTTTCATTTCTCT...............................................................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTCTAC...................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTCTAG...............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTCC................................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTACCGT.............................................................................................................................

1.00

...................................................................................................................................................................................................................TTGTCCCTGGAGGTCGGTACGGCGTCC............

1.00

0.00

1.00

.....................................................................................................AGGGTTTTTTTTTTTTTTTATCTT.............................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTTTTTAC...............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTC......................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTACC.................................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTTTTAC................................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTAA................................................................................................................................

1.00

................................................................................................ACATTAGGGTTTTTTTTTA.......................................................................................................................................

1.00

0.00

1.00

....................................................................................................TAGGGTTTTTTTTTTTTTTTAATAT.............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTACT................................................................................................................................

1.00

0.00

1.00

....................................................................................................TAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTCTCA..............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTCAC..................................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTAC...................................................................................................................................

1.00

0.00

1.00

.....................................................................................................AGGGTTTTTTTTTTTTTTAGCT...............................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTATC................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTACAG...................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTCTTC.................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTACAC...............................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTAT.................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTCAA................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTTC..............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTCTTA...............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTACAG....................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTCAC....................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTCTA..................................................................................................................................

1.00

0.00

1.00

.....................................................................................................AGGGTTTTTTTTTTTTTTTAGGA..............................................................................................................................

1.00

0.00

1.00

...................................................................ATTTCTGGGAGGTGGTGGA....................................................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTCTTC...............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTT..................................................................................................................................

1.00

0.67

0.33

.....................................................................................................AGGGTTTTTTTTTTTTTTTAGG...............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTGTAA.................................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTTTTTTAT..............................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTGGA..................................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTCAC..............................................................................................................................

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTCTAC..................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTAAGG...................................................................................................................................

1.00

0.00

1.00

.................................................................................................................TTTTTTTAAGTGTTTCCTAT.....................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTTT..............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTAC......................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTACGC.................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCCAC..............................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTTTTAAAG..............................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................................CCCACGGATTCTCCTTTCG................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTCTC................................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTTTCAC................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTCTCC...............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTA.................................................................................................................................

1.00

...................................................................................................TTAGGGTTTTTTTTTTTCTAC..................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCCCC..............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTCTAC...............................................................................................................................

1.00

0.00

1.00

....................................................................................................TAGGGTTTTTTTTTTTTTTTCC................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTCTAA..............................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................................CCCACGGATTCTCCTTTTG................................................

1.00

0.00

1.00

.....................................................................................................AGGGTTTTTTTTTTTTTTTAGGT..............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTCGGA..................................................................................................................................

1.00

0.00

1.00

.................................................................................................CATTAGGGTTTTTTTTTTTTTTCCAC...............................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTTTACAG..............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTATTGG.............................................................................................................................

1.00

0.00

1.00

.......................................................................................................................................................................................CCCACGGATTCTCCTTTCT................................................

1.00

0.00

1.00

.......................................................................................................................................................................................CCCACGGATTCTCCTTTTT................................................

1.00

0.00

1.00

....................................................................................................TAGGGTTTTTTTTTTTTTTATC................................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTACAG..................................................................................................................................

1.00

0.00

1.00

....................................................................................................TAGGGTTTTTTTTTTTTTTCGG................................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTTTTGCG...............................................................................................................................

1.00

0.00

1.00

...................................................................................................TTAGGGTTTTTTTTTTTTACCC.................................................................................................................................

1.00

0.00

1.00

..................................................................................................ATTAGGGTTTTTTTTTTTTTGC..................................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTAC.....................................................................................................................................

1.00

0.00

1.00

.....................................................................................................AGGGTTTTTTTTTTTTTTACGG...............................................................................................................................

1.00

0.00

1.00

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTA................................................................................................................................

0.67

1.00

0.67

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTA...............................................................................................................................

0.67

1.00

0.67

...................................................................................................TTAGGGTTTTTTTTTTTTTTTAAG...............................................................................................................................

0.50

...................................................................................................TTAGGGTTTTTTTTTTTTTTTAA................................................................................................................................

0.50

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTC.................................................................................................................................

0.33

1.00

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTAT...............................................................................................................................

0.33

1.00

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTC...............................................................................................................................

0.33

1.00

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTAC..................................................................................................................................

0.33

0.17

................................................................................................ACATTAGGGTTTTTTTTTTTTTACAG................................................................................................................................

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTT....................................................................................................................................

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTCC..............................................................................................................................

0.33

1.00

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTTTA..............................................................................................................................

0.33

1.00

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTCTAC..............................................................................................................................

0.33

1.00

0.33

................................................................................................ACATTAGGGTTTTTTTTTTTTTTTTCCC..............................................................................................................................

0.33

1.00

0.33

...................................................................................................TTAGGGTTTTTTTTTTTTTTTAAAG..............................................................................................................................

0.17

0.50

0.17