uc003cbk.1_intron_9_0_chr3_19492897

ATAATGGCCATAAAACAAATAAAAGCTAAAGCCCAGGTATGATGCTATTGTATGCCAAAGTTGAAAAGCCCTGCCCCAAGGTAAACATTCTTCTCTTTTCAGTGTAATCTCACTGAAAAATGAAGCCTGTAAGTCAAATGAGGTTATCAGTCCTAAGCTTGCTTTTTTTTTTTGAAAATGATCTCTCTCTCTCTTTCTAGGGAAAGGGGATTTAATTGGAGCAAATCTATCAATTAAGGACCAAGTGATC .............................................................................................................(((..((((((.(((((..((........(((.....))).......))..))))).)))))))))........................................................................... .......................................................................................................104..........................................................................181...................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR189782	SRR189787	SRR189785	TAX577742(Rovira) total RNA. (breast)	SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line)	SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR040018(GSM532903) G701N. (cervix)
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCATG.........................................................................	22		24.00	0.00	22.00	2.00	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTCATG..........................................................................	21		14.00	0.00	13.00	1.00	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTCATG...........................................................................	20		9.00	0.00	9.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTCATG............................................................................	19		5.00	0.00	5.00	-	-	-	-	-	-	-	-	-	-	-
............................................................................................................CTCACTGAAAAATGAATGCA..........................................................................................................................	20		2.00	0.00	-	-	-	-	1.00	-	-	1.00	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCTTC.........................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCAAG.........................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTTCTTC..........................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTCTTC...........................................................................	21		2.00	0.00	-	2.00	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCACG.........................................................................	22		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................TTGCTTTTTTTTTTTGACGGA.......................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................AACATTCTTCTCTTTTCTG....................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	1.00	-	-	-	-	-	-
................................................................................................................................................................GCTTTTTTTTTTTGATACG.......................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	1.00	-	-
............................................................................................................CTCACTGAAAAATGAACTCC..........................................................................................................................	20		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-
...................................................................................AACATTCTTCTCTTTTTG.....................................................................................................................................................	18		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-
.........................................................................................................................................................TAAGCTTGCTTTTTTTTTCATG...........................................................................	22		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTCAAG..........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCAG..........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTCTC............................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTTTCATG.........................................................................	23		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................TAAGCTTGCTTTTTTTTTTTCTTC.........................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................AACATTCTTCTCTTTCGTT....................................................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-
..............................................................................................................................................................TTGCTTTTTTTTTTTGACG.........................................................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................TAAGCTTGCTTTTTTTTTTC.............................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTGATG..........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCGAC.........................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
............................................................................................................................................................GCTTGCTTTTTTTTTTACC...........................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTCATG.............................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................TAATCTCACTGAAAATATG...............................................................................................................................	19		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTCACG..........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.............AACAAATAAAAGCTATCTT..........................................................................................................................................................................................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTTTCTTC.........................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTCACG...........................................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
.............AACAAATAAAAGCTATCTG..........................................................................................................................................................................................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCAT..........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTAC.............................................................................	19		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTTTTTCG.........................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
..........................................................................................................................................................AAGCTTGCTTTTTTTTTCATG...........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTCCTC..........................................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................................AGCTTGCTTTTTTTTTTTG............................................................................	19	5	0.40	0.40	0.20	-	-	-	-	-	-	-	-	-	0.20	-

ATAATGGCCATAAAACAAATAAAAGCTAAAGCCCAGGTATGATGCTATTGTATGCCAAAGTTGAAAAGCCCTGCCCCAAGGTAAACATTCTTCTCTTTTCAGTGTAATCTCACTGAAAAATGAAGCCTGTAAGTCAAATGAGGTTATCAGTCCTAAGCTTGCTTTTTTTTTTTGAAAATGATCTCTCTCTCTCTTTCTAGGGAAAGGGGATTTAATTGGAGCAAATCTATCAATTAAGGACCAAGTGATC
.............................................................................................................(((..((((((.(((((..((........(((.....))).......))..))))).)))))))))...........................................................................
.......................................................................................................104..........................................................................181...................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

SRR189782

SRR189787

SRR189785

TAX577742(Rovira)
total RNA. (breast)

SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR040018(GSM532903)
G701N. (cervix)

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCATG.........................................................................

24.00

0.00

22.00

2.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTCATG..........................................................................

14.00

0.00

13.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTCATG...........................................................................

9.00

0.00

9.00

...........................................................................................................................................................AGCTTGCTTTTTTTTCATG............................................................................

5.00

0.00

5.00

............................................................................................................CTCACTGAAAAATGAATGCA..........................................................................................................................

2.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCTTC.........................................................................

2.00

0.00

2.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCAAG.........................................................................

2.00

0.00

2.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTTCTTC..........................................................................

2.00

0.00

2.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTCTTC...........................................................................

2.00

0.00

2.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCACG.........................................................................

2.00

0.00

2.00

..............................................................................................................................................................TTGCTTTTTTTTTTTGACGGA.......................................................................

1.00

0.00

1.00

...................................................................................AACATTCTTCTCTTTTCTG....................................................................................................................................................

1.00

0.00

1.00

................................................................................................................................................................GCTTTTTTTTTTTGATACG.......................................................................

1.00

0.00

1.00

............................................................................................................CTCACTGAAAAATGAACTCC..........................................................................................................................

1.00

0.00

1.00

...................................................................................AACATTCTTCTCTTTTTG.....................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................................................TAAGCTTGCTTTTTTTTTCATG...........................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTCAAG..........................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCAG..........................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTCTC............................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTTTCATG.........................................................................

1.00

0.00

1.00

.........................................................................................................................................................TAAGCTTGCTTTTTTTTTTTCTTC.........................................................................

1.00

0.00

1.00

...................................................................................AACATTCTTCTCTTTCGTT....................................................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................TTGCTTTTTTTTTTTGACG.........................................................................

1.00

0.00

1.00

.........................................................................................................................................................TAAGCTTGCTTTTTTTTTTC.............................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTGATG..........................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCGAC.........................................................................

1.00

0.00

1.00

............................................................................................................................................................GCTTGCTTTTTTTTTTACC...........................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTCATG.............................................................................

1.00

0.00

1.00

........................................................................................................TAATCTCACTGAAAATATG...............................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTCACG..........................................................................

1.00

0.00

1.00

.............AACAAATAAAAGCTATCTT..........................................................................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTTTCTTC.........................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTCACG...........................................................................

1.00

0.00

1.00

.............AACAAATAAAAGCTATCTG..........................................................................................................................................................................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTCAT..........................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTAC.............................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTTTTTCG.........................................................................

1.00

0.00

1.00

..........................................................................................................................................................AAGCTTGCTTTTTTTTTCATG...........................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTCCTC..........................................................................

1.00

0.00

1.00

...........................................................................................................................................................AGCTTGCTTTTTTTTTTTG............................................................................

0.40

0.20

ATAATGGCCATAAAACAAATAAAAGCTAAAGCCCAGGTATGATGCTATTGTATGCCAAAGTTGAAAAGCCCTGCCCCAAGGTAAACATTCTTCTCTTTTCAGTGTAATCTCACTGAAAAATGAAGCCTGTAAGTCAAATGAGGTTATCAGTCCTAAGCTTGCTTTTTTTTTTTGAAAATGATCTCTCTCTCTCTTTCTAGGGAAAGGGGATTTAATTGGAGCAAATCTATCAATTAAGGACCAAGTGATC .............................................................................................................(((..((((((.(((((..((........(((.....))).......))..))))).)))))))))........................................................................... .......................................................................................................104..........................................................................181...................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	SRR189782	SRR189787	SRR189785	TAX577742(Rovira) total RNA. (breast)	SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line)	SRR326280(GSM769510) total cell content of unperturbed cells was s. (cell line)	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR040018(GSM532903) G701N. (cervix)
...................TAAAAGCTAAAGCCCACTG....................................................................................................................................................................................................................	19		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-
..............................................................................................................................................................TTGCTTTTTTTTTTTGCAAT........................................................................	20		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-
....................................................................................................................................................................................................CTAGGGAAAGGGGATTGGA...................................	19		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................ATCATTTTCAAAAAAAAAA....................................................................	19	6	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	0.17