ID: uc003byd.1_intron_2_0_chr3_13759260_f
GENE: LOC285375(3)
chr3:13759210-13759784+


(2)
AGO1.ip
(3)
AGO2.ip
(2)
AGO3.ip
(4)
B-CELL
(4)
BRAIN
(5)
BREAST
(28)
CELL-LINE
(6)
CERVIX
(1)
HEART
(5)
HELA
(7)
LIVER
(1)
OTHER
(5)
SKIN
(2)
UTERUS

Sense strand
AGCAAGGAAAGAGGTGTGTCTTCCGCAGAAAAATGTGCATGTTCTTTTAGGTGAGATGGGAACAATGCGGGGAGGGGGCCTGGCTATGAGGGCAGGGGCTGTGGGTGGGGTGGGGGAGTGGACTGTTGGCAGCAGAACCTGCTAGGTAGGCTCACTAGACTCAGACACGCACGCTCTCTCTCTCTCTCTCAAGAAAACAGGTGCACAAATTATTAGGTTGGTACAAAGTAATTGTGGTTTTTGCTATTAAAGTAATGGCAAAAACTGCAATTATTTTTGCACCAACCAAATACATCCATGTGGATGGGGCAGCCTTTTCCAAGGGATTCCACCATGCAGGGCTGGATCTGGCCTCCTGGCTGTGTGACTTTGTGCATTGTCCTTCCCTCTCTGGGCTGTGGTGCCCCAGCTGGAACTCCAAGGGCTGAGACTCAAGGGCCTTGTAGAGCCTTGGCTCTGTACCCAGCTCTGTGGTGGATTCAGGGTTAGGGGGCCTGGGTTCAAATCCAGACCCTGCCTTTTCAGATGTGTGGCCTCCGAGCAAGGTATTTAGCCTGCCTCTATGTGCTCACCTG
..........................................................................................................((((.(((((((((..(((....)))..((.(((((...))))).))..................))))))))).)))).......((((((.....(((.(((((((..((....))..)))))))))))))))).............................................................................................................................................................................................................................................................................................................................................
.........................................................................................................106...........................................................................................................................................248.....................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR037938(GSM510476)
293Red. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR343334SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189783SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
GSM956925PAZD5SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR037931(GSM510469)
293GFP. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR038859(GSM458542)
MM386. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR040015(GSM532900)
G623T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGC...........................................................................................................................................................................................................................................................................................................................................200205.00205.00--72.00-30.0028.0025.00-16.0016.0013.00--4.001.00-------------------------------------------------------------
...................................................................................................................................................................................................................................GTAATTGTGGTTTTTGC...........................................................................................................................................................................................................................................................................................................................................17012.0012.00--5.00--1.001.00-2.001.001.00-------------------------------1.00---------------------------------
..............................................................................................................TGGGGGAGTGGACTGTATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................206.000.00-6.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTGGCC..........................................................................................................................................................................................................................................................................................................................................225.000.00---1.00-------------3.00-----------------------------1.00----------------------------
..............................................................................................................TGGGGGAGTGGACTGTAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................203.000.00-2.00------------------------1.00-------------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................183.000.00-2.00------------------------------------------------1.00-------------------------
..................................................................................................................................................................................................................................AGTAATTGTGGTTTTTGC...........................................................................................................................................................................................................................................................................................................................................1803.003.00------------------3.00---------------------------------------------------------
..................................................................................................................GGAGTGGACTGTTGGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................183.000.00-------------------3.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTTGA.......................................................................................................................................................................................................................................................................................................223.000.00-1.00--------------------------------------------------1.00---------1.00-------------
....................................................................................................................................................................................................................................TAATTGTGGTTTTTGC...........................................................................................................................................................................................................................................................................................................................................1603.003.00--------2.00-1.00-----------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTG............................................................................................................................................................................................................................................................................................................................................1903.003.00------1.00-2.00-------------------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTTTC.......................................................................................................................................................................................................................................................................................................222.000.00-1.00-------------------------------1.00------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTGC.........................................................................................................................................................................................................................................................................................................202.000.002.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTGGCA...........................................................................................................................................................................................................................................................................................................................................2002.001.002.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTCTTC...........................................................................................................................................................................................................................................................................................................................................2002.001.00----------------------------------------1.00-------1.00---------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTGTC...........................................................................................................................................................................................................................................................................................................................................212.000.00----------------2.00-----------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTGT........................................................................................................................................................................................................................................................................................................212.000.001.00------------------------------------------1.00--------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGATG.........................................................................................................................................................................................................................................................................................................................................2202.003.00-----------------------------------------1.00--1.00-------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTTCT..........................................................................................................................................................................................................................................................................................................................................2102.001.00--------------------------1.00---------------------------1.00---------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTTAA.......................................................................................................................................................................................................................................................................................................222.000.00-----------2.00----------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTGGC...........................................................................................................................................................................................................................................................................................................................................212.000.00------------1.00--------1.00------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGCTGA........................................................................................................................................................................................................................................................................................................................................232.000.00----------------------------1.00--------------------------------1.00--------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTGGCA..........................................................................................................................................................................................................................................................................................................................................221.000.00------------1.00---------------------------------------------------------------
...................................................................................................................................................................................................................................................................AAAAACTGCAATTATTTTTGAA......................................................................................................................................................................................................................................................................................................221.000.00-----------------------------1.00----------------------------------------------
.................................................................................................................GGGAGTGGACTGTTGTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------1.00-------------------------------------------
............................................................................................................................................................................................................................................GTTTTTGCTATTAAATATA................................................................................................................................................................................................................................................................................................................................191.000.00---------------1.00------------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTGTGG.......................................................................................................................................................................................................................................................................................................221.000.00-------1.00--------------------------------------------------------------------
...................................................................................................................................................................................................................................................................AAAAACTGCAATTATTTTTGTT......................................................................................................................................................................................................................................................................................................221.000.00-1.00--------------------------------------------------------------------------
..........................................................................................................................................................................ACGCTCTCTCTCTCTAAA...................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------1.00---------------------------------------------------
...................................................................................................................GAGTGGACTGTTGGCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-------------------------------------------------------1.00--------------------
..............................................................................................................TGGGGGAGTGGACTGTGTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------1.00--------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTT...............................................................................................................................................................................................................................................................................................................................................1601.001.00------1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTTGCT......................................................................................................................................................................................................................................................................................................231.000.00-1.00--------------------------------------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGAT..........................................................................................................................................................................................................................................................................................................................................2101.003.00--------------------------------------------------------1.00-------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGAACTCCAAGAC.......................................................................................................................................................181.000.00------------------------------1.00---------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTT.............................................................................................................................................................................................................................................................................................................................................1801.001.00--1.00-------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTCGGC...........................................................................................................................................................................................................................................................................................................................................2001.001.00---1.00------------------------------------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................AAACTGCAATTATTTTTAAG......................................................................................................................................................................................................................................................................................................201.000.00-------1.00--------------------------------------------------------------------
....................................................................................................................................................................................................................................................................AAAACTGCAATTATTTTGAAA......................................................................................................................................................................................................................................................................................................211.000.00-----------------------------1.00----------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------1.00--------------------------------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
...........................................................................................................................................................................CGCTCTCTCTCTCTCTCTCCAG..............................................................................................................................................................................................................................................................................................................................................................................................221.000.00-------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................................................GCAAAAACTGCAATTATTTTTCG.......................................................................................................................................................................................................................................................................................................231.000.00-1.00--------------------------------------------------------------------------
.............................................................................................................................................................................................................................TACAAAGTAATTGTGGAAGA..............................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------1.00--------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTGTCA..........................................................................................................................................................................................................................................................................................................................................221.000.00----------------1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATCTTG.........................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
..............................................................................................GGGGCTGTGGGTGGGTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------1.00-----------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGGTGT........................................................................................................................................................................................................................................................................................................................................2301.003.00-----------------------------------1.00----------------------------------------
...................................................................................................................................................................................................................................................................AAAAACTGCAATTATTTTCG........................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................AAAAACTGCAATTATTTTGG........................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTCTAC.......................................................................................................................................................................................................................................................................................................221.000.001.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTAGC...........................................................................................................................................................................................................................................................................................................................................211.000.00-----------------------1.00----------------------------------------------------
.....................................................................................................................................................................................................................................................................AAACTGCAATTATTTCACA.......................................................................................................................................................................................................................................................................................................191.000.00----------------------1.00-----------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTTGG.......................................................................................................................................................................................................................................................................................................221.000.00-1.00--------------------------------------------------------------------------
................................................................ATGCGGGGAGGGGGCCCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------1.00--------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTCGC...........................................................................................................................................................................................................................................................................................................................................211.000.00---------------------------------------------1.00------------------------------
.................................................................................................................................................................................................................................................................GCAAAAACTGCAATTATTTTTGAAA.....................................................................................................................................................................................................................................................................................................251.000.00-------------------------------------------------1.00--------------------------
.................................................................TGCGGGGAGGGGGCCTGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------------------1.00------------------
..........................................................................................................................................................................ACGCTCTCTCTCTCTCAA...................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------1.00---------------------------------------------------
...........................................................................................................................................................................CGCTCTCTCTCTCTCCGCC.................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------1.00----------------------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------1.00---------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTCGC.......................................................................................................................................................................................................................................................................................................221.000.00-1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCCTTTTCAGATCGT.............................................181.000.00---------------------------------------1.00------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGGCTGAGACTCTG............................................................................................................................................181.000.00--------------------------------------1.00-------------------------------------
..............................................................................................................TGGGGGAGTGGACTGTATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
...........................................................................................GCAGGGGCTGTGGGTGGGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00------------------------------------------------------------1.00---------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGCTCA........................................................................................................................................................................................................................................................................................................................................231.000.00-----------------------------------------------------------1.00----------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTTGCT..........................................................................................................................................................................................................................................................................................................................................2260.670.67---------------------0.17-------------------------------------------------0.170.170.17--
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGCTCTGTGGTGG..................................................................................................1680.120.12---------------------------------------------------------------------------0.12

Antisense strand
AGCAAGGAAAGAGGTGTGTCTTCCGCAGAAAAATGTGCATGTTCTTTTAGGTGAGATGGGAACAATGCGGGGAGGGGGCCTGGCTATGAGGGCAGGGGCTGTGGGTGGGGTGGGGGAGTGGACTGTTGGCAGCAGAACCTGCTAGGTAGGCTCACTAGACTCAGACACGCACGCTCTCTCTCTCTCTCTCAAGAAAACAGGTGCACAAATTATTAGGTTGGTACAAAGTAATTGTGGTTTTTGCTATTAAAGTAATGGCAAAAACTGCAATTATTTTTGCACCAACCAAATACATCCATGTGGATGGGGCAGCCTTTTCCAAGGGATTCCACCATGCAGGGCTGGATCTGGCCTCCTGGCTGTGTGACTTTGTGCATTGTCCTTCCCTCTCTGGGCTGTGGTGCCCCAGCTGGAACTCCAAGGGCTGAGACTCAAGGGCCTTGTAGAGCCTTGGCTCTGTACCCAGCTCTGTGGTGGATTCAGGGTTAGGGGGCCTGGGTTCAAATCCAGACCCTGCCTTTTCAGATGTGTGGCCTCCGAGCAAGGTATTTAGCCTGCCTCTATGTGCTCACCTG
..........................................................................................................((((.(((((((((..(((....)))..((.(((((...))))).))..................))))))))).)))).......((((((.....(((.(((((((..((....))..)))))))))))))))).............................................................................................................................................................................................................................................................................................................................................
.........................................................................................................106...........................................................................................................................................248.....................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189782DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR037938(GSM510476)
293Red. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR343334SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532875(GSM532875)
G547N. (cervix)
SRR189785TAX577739(Rovira)
total RNA. (breast)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR189783SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191454(GSM715564)
180genomic small RNA (size selected RNA from . (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM532874(GSM532874)
G699T. (cervix)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
GSM416733(GSM416733)
HEK293. (cell line)
GSM956925PAZD5SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR037931(GSM510469)
293GFP. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR040025(GSM532910)
G613T. (cervix)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR038859(GSM458542)
MM386. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR040015(GSM532900)
G623T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCTGT......................................................................................................................................................................................................................................................................................................................................... 2136.000.0028.001.00-7.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCTGT........................................................................................................................................................................................................................................................................................................................................ 2223.000.008.001.00-9.00---5.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGC........................................................................................................................................................................................................................................................................................................................................... 1914.000.00-13.00-----------------------------1.00--------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGCGT......................................................................................................................................................................................................................................................................................................................................... 22014.000.007.001.00-2.00---4.00--------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTCGTA......................................................................................................................................................................................................................................................................................................................................... 22014.000.0012.00--2.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCA.......................................................................................................................................................................................................................................................................................................................................... 2011.000.002.006.00-2.00-------------------------------------------------1.00----------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTGCAC.......................................................................................................................................................................................................................................................................................................................................... 209.000.002.003.00-4.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................AAAAACCACAATTACTTTGT............................................................................................................................................................................................................................................................................................................................................. 2028.008.002.504.00-1.50------------------------------------------------------------------------
..............................................................................................................................................................................................................................CAAAAACCACAATTACTTTGT............................................................................................................................................................................................................................................................................................................................................ 2126.506.501.004.50-----1.00--------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTCGT.......................................................................................................................................................................................................................................................................................................................................... 2106.000.002.001.00-2.00--------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................TACAAAGTAATTGTGGTTTTTA............................................................................................................................................................................................................................................................................................................................................ 225.500.004.001.50--------------------------------------------------------------------------
.............................................................................................................................................................................................................................AAAAACCACAATTACTTTGTA............................................................................................................................................................................................................................................................................................................................................. 2125.005.003.501.50--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGGC.......................................................................................................................................................................................................................................................................................................................................... 205.000.00-3.00-----2.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTGTAA.......................................................................................................................................................................................................................................................................................................................................... 205.000.001.004.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTGCA........................................................................................................................................................................................................................................................................................................................................... 195.000.00-----------5.00----------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGGTA......................................................................................................................................................................................................................................................................................................................................... 214.000.004.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTCGTA.......................................................................................................................................................................................................................................................................................................................................... 214.000.004.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCGTA......................................................................................................................................................................................................................................................................................................................................... 214.000.004.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTTCAT.......................................................................................................................................................................................................................................................................................................................................... 223.000.00-3.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGTAA......................................................................................................................................................................................................................................................................................................................................... 213.000.002.00--1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCAC......................................................................................................................................................................................................................................................................................................................................... 213.000.001.00--2.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................ATAATTGCAGTTTTTGCCATT............................................................................................................................................................................................................................................................................................................. 2103.003.00---------1.00----2.00-------------------------------------------------------------
............................................................................................................................................................................................................................AACCACAATTACTTTGTAC................................................................................................................................................................................................................................................................................................................................................ 1912.002.00-2.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCTGA........................................................................................................................................................................................................................................................................................................................................ 222.000.001.00--1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTGCAT.......................................................................................................................................................................................................................................................................................................................................... 202.000.001.00--1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTATT.......................................................................................................................................................................................................................................................................................................................................... 2102.000.00-2.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTCAT........................................................................................................................................................................................................................................................................................................................................... 212.000.00-1.00-1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTCACT.......................................................................................................................................................................................................................................................................................................................................... 222.000.001.00------------------------------------1.00--------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCCG......................................................................................................................................................................................................................................................................................................................................... 212.000.00-------2.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGTC.......................................................................................................................................................................................................................................................................................................................................... 202.000.00-2.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCCG.......................................................................................................................................................................................................................................................................................................................................... 202.000.00-------2.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTATGT......................................................................................................................................................................................................................................................................................................................................... 212.000.001.00--------------1.00------------------------------------------------------------
...........................................................................................................................................................................................................................................................................CAATTATTTTTGCACGTTT................................................................................................................................................................................................................................................................................................. 192.000.00---2.00------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTCGAA......................................................................................................................................................................................................................................................................................................................................... 2202.000.00---1.00-----------------1.00------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCCGT......................................................................................................................................................................................................................................................................................................................................... 212.000.001.00--1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................TTGGTTGGTGCAAAAATAATTG.............................................................................................................................................................................................................................................................................................. 2251.201.20------------------------------0.20--------------------------------0.20-0.40---0.200.20-----
............................................................................................................................................................................GCTCTCTCTCTCTCTCTCAAGAATG.......................................................................................................................................................................................................................................................................................................................................................................................... 251.000.00---------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCGCA......................................................................................................................................................................................................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGCGA......................................................................................................................................................................................................................................................................................................................................... 2201.000.001.00---------------------------------------------------------------------------
...................................................................................................................................................................................................................................GTAATTGTGGTTTTTGGCA......................................................................................................................................................................................................................................................................................................................................... 191.000.001.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGTAATTGTGGTTTTTGGA.......................................................................................................................................................................................................................................................................................................................................... 191.000.001.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTCGCA.......................................................................................................................................................................................................................................................................................................................................... 201.000.001.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCGC.......................................................................................................................................................................................................................................................................................................................................... 201.000.001.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................................................ATAATTGCAGTTTTTGCCATTA............................................................................................................................................................................................................................................................................................................. 2201.001.00---------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTCGA.......................................................................................................................................................................................................................................................................................................................................... 2101.000.00---1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTTGTC.......................................................................................................................................................................................................................................................................................................................................... 221.000.00-1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................TCTCAAGAAAACAGGCGG................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00---------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCTGG........................................................................................................................................................................................................................................................................................................................................ 221.000.00---1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGGG.......................................................................................................................................................................................................................................................................................................................................... 201.000.00-1.00--------------------------------------------------------------------------
........................................................................................................................................................................................................................GTTGGTACAAAGTAATTATAA.................................................................................................................................................................................................................................................................................................................................................. 211.000.00-1.00--------------------------------------------------------------------------
...........................................................................................................................................................................AGAGAGAGAGAGAGAGCG.................................................................................................................................................................................................................................................................................................................................................................................................. 1801.001.00----------------------------------------------------------1.00-----------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTCATA.......................................................................................................................................................................................................................................................................................................................................... 221.000.00---1.00------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................AAACTGCAATTATTTTTCAG...................................................................................................................................................................................................................................................................................................... 201.000.00-1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................CAAAAACTGCAATTATTTTGAC....................................................................................................................................................................................................................................................................................................... 221.000.00------------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................TACAAAGTAATTGTGGTTTA.............................................................................................................................................................................................................................................................................................................................................. 201.000.001.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGAGG......................................................................................................................................................................................................................................................................................................................................... 211.000.00-1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTGTT........................................................................................................................................................................................................................................................................................................................................... 191.000.00-1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTTTGCAA......................................................................................................................................................................................................................................................................................................................................... 231.000.00-1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTCCG........................................................................................................................................................................................................................................................................................................................................... 191.000.00-1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTATGA.......................................................................................................................................................................................................................................................................................................................................... 211.000.00-1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCCC.......................................................................................................................................................................................................................................................................................................................................... 201.000.00-1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGGGCTGTGGTACGG......................................................................................................................................................................... 191.000.00----------------------------1.00-----------------------------------------------
..................................................................................................................................................................................................................................AGTAATTGTGGTTTTTGGC.......................................................................................................................................................................................................................................................................................................................................... 191.000.001.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTCTT.......................................................................................................................................................................................................................................................................................................................................... 201.000.00-1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCAT......................................................................................................................................................................................................................................................................................................................................... 211.000.00----------------------------------1.00-----------------------------------------
..............................................................................................................................................................................................................................ACAAAGTAATTGTGGTTCG.............................................................................................................................................................................................................................................................................................................................................. 191.000.00-1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGTA.......................................................................................................................................................................................................................................................................................................................................... 201.000.001.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGA........................................................................................................................................................................................................................................................................................................................................... 191.000.00-1.00--------------------------------------------------------------------------
..............................................................................................................................................................................................................................................TTTTGCTATTAAAGTACTCC............................................................................................................................................................................................................................................................................................................................. 201.000.00----------------------1.00-----------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTCGG........................................................................................................................................................................................................................................................................................................................................... 191.000.00-1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CTGGCCTCCTGGCTGTCAC................................................................................................................................................................................................................. 191.000.00--------------------1.00-------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTGAGT......................................................................................................................................................................................................................................................................................................................................... 2201.000.001.00---------------------------------------------------------------------------
...................................................................................................................................................................................................................................GTAATTGTGGTTTTTGCTAG........................................................................................................................................................................................................................................................................................................................................ 201.000.00-1.00--------------------------------------------------------------------------
................................................................................................................................................................................................................................AAAGTAATTGTGGTTTTTAGTA......................................................................................................................................................................................................................................................................................................................................... 2201.000.00-------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTCG............................................................................................................................................................................................................................................................................................................................................ 181.000.00-1.00--------------------------------------------------------------------------
...................................................................................................................................................................................................................................GTAATTGTGGTTTTTCTTG......................................................................................................................................................................................................................................................................................................................................... 191.000.00-1.00--------------------------------------------------------------------------
...............................................................................................................................................................................CTCTCTCTCTCTCTCAAGTG............................................................................................................................................................................................................................................................................................................................................................................................ 201.000.00--------------------1.00-------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCCCAGCTGGAAAAA............................................................................................................................................................. 181.000.00---------------1.00------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTGCAC........................................................................................................................................................................................................................................................................................................................................... 191.000.001.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................................CAAAGTAATTGTGGTTTCACT........................................................................................................................................................................................................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................AAGTAATTGTGGTTTTTGCGT......................................................................................................................................................................................................................................................................................................................................... 211.000.001.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTACCCAGCTCATAT...................................................................................................... 191.000.00-1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................TTTGGTTGGTGCAAAAATAATTG............................................................................................................................................................................................................................................................................................. 2340.750.75---------------------------------------------------------------0.250.25-0.25---------
.....................................................................................................................................................................AGAGAGAGAGAGAGAGCGTGCGTG.................................................................................................................................................................................................................................................................................................................................................................................................. 2420.500.50--------------------0.50-------------------------------------------------------
..........................................................................................................................................................................................................................................................................TGGTTGGTGCAAAAATAATTGC............................................................................................................................................................................................................................................................................................... 2250.400.40------------------------------0.40---------------------------------------------
...........................................................................................................................................................................................................................................................................CAATTATTTTTGCACCAACCAAT............................................................................................................................................................................................................................................................................................. 230.400.00-------------------------------------------------------------------0.200.20-------
....................................................................................................................................................................................................................................................TTTGCCATTACTTTAATA......................................................................................................................................................................................................................................................................................................................... 1850.400.40-------------------------------0.40--------------------------------------------
...........................................................................................................................................................................................................................................................................CAATTATTTTTGCACCAACCAAAA............................................................................................................................................................................................................................................................................................ 240.250.00---------------------------------------------------------------0.25------------
...........................................................................................................................................................................................................................................................................TGGTTGGTGCAAAAATAATTG............................................................................................................................................................................................................................................................................................... 2150.200.20----------------------------------------------------------------0.20-----------
..............................................................................................................................................................................................................................................................................TTTGGTTGGTGCAAAAATAA............................................................................................................................................................................................................................................................................................. 2070.140.14--------------------------------------------------------------------------0.14-