ID: uc003bxk.2_intron_7_0_chr3_12856933_f
GENE: CAND2(8)
chr3:12856883-12857415+


(6)
B-CELL 		(12)
BRAIN 		(15)
BREAST 		(35)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(8)
HEART 		(4)
LIVER 		(2)
OTHER 		(2)
RRP40.ip 		(18)
SKIN 		(1)
XRN.ip

Sense strand
TGGAGGAACCCACCCAGACCGGCAGCAACCTCCATATGCTACGTGGACAGGTGGGCGTGCCTTCACCTCCACCCCTACCCCCGATTTGCCTACCCAGCCACTCACTGTTAGTGTCCCTGGACTTGGAAACTCAGCTGGGAGAACATCCAGCCATGGAAGGGAAGGGAAGGGGTCCCTGGGGTGGGGGGCGGGAGCCAGCCAGGCTTCTGGAGTGTAGTAGTGACAGCCAGCCTGCCTGAGTGAGCTTGAGCAAGTTGCTTGGTCTCTCTGTACCTGTAAAATGGACGCAGAAAATTTGCCTACTCTCCAAGGGTCTGTGTGCGGTCACCAAAAGCCTGGCACAGAGTGAGGGACGAGTGCTTGGGAGATATCTTGATGCCGACATCCTCCCTGGGGATGTGTCTGGCAAAGCCTCCTGGTAGTGGGCAGGTGGGTAGGTTTCTTGGGTGTTCCCTGACCTTGACTTCCCCCTCCTGCCCACAGGTGCCCCTTGTGGTCAAGGCCCTGCAGCGGCAGCTTAAAGATCGGAGCGT
..................................................(((((.(((....))).))))).................((.((((((.........((((.(((....))))))).......))))))))........................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.............................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormTAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577739(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR038861(GSM458544)
MM466. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR038858(GSM458541)
MEL202. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGG.........................................................................................................................................................................................................................................................................................................................18317.000.0053.0039.00-29.0017.0013.0018.0013.0011.0011.007.00--7.008.00--1.003.001.004.007.005.00-6.006.004.002.005.004.005.002.002.00--3.00-1.00--2.00-3.001.00-1.00---1.001.002.00-3.00------1.00---2.002.00-2.00-2.00--1.00---1.001.00-----1.00------1.00---1.00--1.00----
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGTT.......................................................................................................................................................................................................................................................................................................................2099.000.00--43.00--1.00----1.00-6.00---1.006.00-3.00---4.00-----1.00---4.001.00--2.00------3.00-2.00-3.00-----3.001.001.00--1.001.00-1.002.00--2.00------------1.00-1.001.00-1.001.00---------1.00------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGT........................................................................................................................................................................................................................................................................................................................1955.000.001.002.00-4.008.001.00-2.001.003.001.007.002.00-1.00---2.001.001.00-2.001.00---4.002.001.001.001.00---2.00-------1.00-------1.00------1.00----------------------------1.00--------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGT.........................................................................................................................................................................................................................................................................................................................1822.000.003.004.00-2.003.001.001.00-1.00----2.00------2.001.00--1.00-------------------------------------------------------------------1.00---------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGA........................................................................................................................................................................................................................................................................................................................1917.000.00-3.00-3.00-3.00--------1.00---1.00-------1.00----1.00----------1.00-------2.00--------------------------------------1.00------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCCCCCTCCTGCCCACAGT.................................................22114.004.00---------------9.002.00-----------------1.00-----------------1.00----1.00--------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTCCCCCTCCTGCCCACA...................................................23113.0013.00----------------3.002.00-----2.00----------1.00-2.00-2.00-------------1.00-------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTTG.........................................................................................................................................................................................................................................................................................................................188.000.00---1.00-2.001.00-1.00-----1.00---2.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGGT.......................................................................................................................................................................................................................................................................................................................207.000.00----1.00-----1.00-2.00------1.00---1.00----------------------------------1.00-------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGG........................................................................................................................................................................................................................................................................................................................195.000.00--------1.00-1.003.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCCCCCTCCTGCCCACAG..................................................2114.004.00------------------------------------1.00--3.00--------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGAA.......................................................................................................................................................................................................................................................................................................................204.000.001.00----1.00-------------------2.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGC........................................................................................................................................................................................................................................................................................................................193.000.00--------1.00--1.00-------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTTATC....................................................................................................................................................................................................................................................................................................................233.000.00----------1.00---1.00-----------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGTG.......................................................................................................................................................................................................................................................................................................................203.000.00------------1.00-------------------1.00----------------1.00----------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGTA.......................................................................................................................................................................................................................................................................................................................203.000.00--1.00---------1.00---------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGC.........................................................................................................................................................................................................................................................................................................................183.000.001.00--1.00----------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTCCCCCTCCTGCCCAC....................................................2213.003.00----------------1.00-------------------2.00-----------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAG............................................................................................................................................................................................................................................................................................................................1562.332.33------------0.50------1.000.17-------------------------0.17--------0.50----------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGGGCAGGTGGGTAGGTTT............................................................................................2212.002.00--------------------------------------------------------------1.00----------------------------1.00----------
..............................................................................................................................................................................................................CTGGAGTGTAGTAGTCTG.....................................................................................................................................................................................................................................................................................................................182.000.00--------------------------------------2.00---------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTCCCCCTCCTGCCCA.....................................................2112.002.00----------------2.00-------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGCA.......................................................................................................................................................................................................................................................................................................................202.000.00-------------------------------1.001.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGGGCAGGTGGGTAGGTTTC...........................................................................................2312.002.00--------------------1.00---1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGTT........................................................................................................................................................................................................................................................................................................................192.000.00-----------1.00-------------------------------------1.00----------------------------------------------------
.................................................................................................................................................................................................................................................................................................................TCCAAGGGTCTGTGTGCGGGTT..............................................................................................................................................................................................................222.000.00--------------------------------------------------------------------2.00---------------------------------
.................................ATATGCTACGTGGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.002.00----------------------------------2.00-------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAG.........................................................................................................................................................................................................................................................................................................................1812.002.001.00----1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGCAGGTGGGTAGGTTTCT..........................................................................................2312.002.00----------------------------------------2.00-------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGGGG.........................................................................................................................................................................................................................................................................................................................1861.672.330.170.50-0.17-----0.170.17--0.33-------0.17--------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGAT.......................................................................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------1.00------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCCCCTCCTGCCCACAGAT................................................221.000.00--------------------------------------------------------------------------------------------------1.00---
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGCTA.......................................................................................................................................................................................................................................................................................................................201.000.00--------------------------------1.00---------------------------------------------------------------------
........................................................................................................................................................ATGGAAGGGAAGGGACATT..........................................................................................................................................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTATTTT......................................................................................................................................................................................................................................................................................................................211.000.00----------------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGAGGT.....................................................................................................................................................................................................................................................................................................................2211.002.00---------------------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGGGCAGGTGGGTAGGTTTCAT.........................................................................................2511.002.00--------------------------------------------------------1.00---------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTTA......................................................................................................................................................................................................................................................................................................................211.000.00-------------------------------------1.00----------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGTC.......................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------1.00--------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGTG........................................................................................................................................................................................................................................................................................................................191.000.00-----------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGTGC.......................................................................................................................................................................................................................................................................................................................201.000.00-------------------1.00----------------------------------------------------------------------------------
...................................................................................................................CCTGGACTTGGAAACTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------1.00--------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTCT.........................................................................................................................................................................................................................................................................................................................181.000.00---1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTCAAGGCCCTGCAGCGGCAGGC...............271.000.00-----------------------------------------1.00------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTCCCCCTCCTGCCCACAGT.................................................241.000.00---------------------------------------------------------1.00--------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTCCCCCTCCTGCCCACA...................................................2211.001.00----------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGCT........................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------
................................CATATGCTACGTGGACAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------------------------------------------------------------------------------1.00-------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTTTT.....................................................................................................................................................................................................................................................................................................................221.000.00-------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................CTCTCTGTACCTGTAAGC............................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------1.00------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTTAT.....................................................................................................................................................................................................................................................................................................................221.000.00--------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTG..........................................................................................................................................................................................................................................................................................................................171.000.00-------------------------------------------------------1.00----------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGGCAGGTGGGTACGTG.............................................................................................201.000.00-----------------------------------------1.00------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTCCCCCTCCTGCCCACT...................................................2311.003.00--------------------------------------------1.00---------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAT.........................................................................................................................................................................................................................................................................................................................181.000.00-------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGA........................................................................................................................................................................................................................................................................................................................1911.002.00-----1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTCCCCCTCCTGCC.......................................................1911.001.00----------------------------------------------------------------------1.00-------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGTAT.......................................................................................................................................................................................................................................................................................................................201.000.00-1.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGA.........................................................................................................................................................................................................................................................................................................................181.000.00------------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGATAT.....................................................................................................................................................................................................................................................................................................................2211.002.00----------1.00-------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTGTTC....................................................................................................................................................................................................................................................................................................................231.000.00-------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGCTAT.....................................................................................................................................................................................................................................................................................................................2211.002.00---------------------------------------------1.00--------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGCT.......................................................................................................................................................................................................................................................................................................................201.000.00--1.00---------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGGGCAGGTGGGTAGGAAT............................................................................................221.000.00--------------------------------------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTTTTT....................................................................................................................................................................................................................................................................................................................231.000.00-------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTAGTTATT....................................................................................................................................................................................................................................................................................................................231.000.00-------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGTA........................................................................................................................................................................................................................................................................................................................191.000.00---------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTCG.........................................................................................................................................................................................................................................................................................................................181.000.00-------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGTGGAG.......................................................................................................................................................................................................................................................................................................................201.000.00--1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................TGGGGTGGGGGGCGGGAGGAC................................................................................................................................................................................................................................................................................................................................................211.000.00-----------------------------------------1.00------------------------------------------------------------
.....................................................................................................................................................................................TGGGGGGCGGGAGCCGGCG.............................................................................................................................................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------------------------------1.00-----
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGCGG.........................................................................................................................................................................................................................................................................................................................1860.502.33-----0.17-0.17-------------------------------------0.17--------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGCGGCAGCTT..............1620.500.50---------------------------------------------------------------------------------------------------0.50--
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGGGGT........................................................................................................................................................................................................................................................................................................................1960.502.33----0.17-------0.17---------------------------------------------------------------------------------------0.17-
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGGGGA........................................................................................................................................................................................................................................................................................................................1960.502.33-------------------0.33-----------0.17----------------------------------------------------------------------
...........................................................................................................................................................................................................CTTCTGGAGTGTAGT...........................................................................................................................................................................................................................................................................................................................1540.250.25----------------------------------------------------------------------0.25-------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGATA.........................................................................................................................................................................................................................................................................................................................1860.172.33--------------------------0.17---------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CTGAGTGAGCTTGAGC..........................................................................................................................................................................................................................................................................................1660.170.17-----------------------------------------------------------------------------------------------------0.17
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGCGGT........................................................................................................................................................................................................................................................................................................................1960.172.33-------------0.17----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GCTTCTGGAGTGTAGCGC.........................................................................................................................................................................................................................................................................................................................1860.172.33------0.17-----------------------------------------------------------------------------------------------

Antisense strand
TGGAGGAACCCACCCAGACCGGCAGCAACCTCCATATGCTACGTGGACAGGTGGGCGTGCCTTCACCTCCACCCCTACCCCCGATTTGCCTACCCAGCCACTCACTGTTAGTGTCCCTGGACTTGGAAACTCAGCTGGGAGAACATCCAGCCATGGAAGGGAAGGGAAGGGGTCCCTGGGGTGGGGGGCGGGAGCCAGCCAGGCTTCTGGAGTGTAGTAGTGACAGCCAGCCTGCCTGAGTGAGCTTGAGCAAGTTGCTTGGTCTCTCTGTACCTGTAAAATGGACGCAGAAAATTTGCCTACTCTCCAAGGGTCTGTGTGCGGTCACCAAAAGCCTGGCACAGAGTGAGGGACGAGTGCTTGGGAGATATCTTGATGCCGACATCCTCCCTGGGGATGTGTCTGGCAAAGCCTCCTGGTAGTGGGCAGGTGGGTAGGTTTCTTGGGTGTTCCCTGACCTTGACTTCCCCCTCCTGCCCACAGGTGCCCCTTGTGGTCAAGGCCCTGCAGCGGCAGCTTAAAGATCGGAGCGT
..................................................(((((.(((....))).))))).................((.((((((.........((((.(((....))))))).......))))))))........................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.............................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormTAX577589(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		TAX577739(Rovira)
total RNA. (breast)		TAX577579(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		TAX577580(Rovira)
total RNA. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577590(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038862(GSM458545)
MM472. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR038861(GSM458544)
MM466. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR038858(GSM458541)
MEL202. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189784SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR038863(GSM458546)
MM603. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR038854(GSM458537)
MM653. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038855(GSM458538)
D10. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................................................................................................................................................................................................................................................................GAGTGAGGGACGAGTG.............................................................................................................................................................................. 163.000.00-----------------------------------------------3.00------------------------------------------------------
................................................................................................................................ACTCAGCTGGGAGAACC.................................................................................................................................................................................................................................................................................................................................................................................................... 173.000.00-------------------------------------------------------------2.00----------------1.00-----------------------
..........................................................................................................................................................................................................................................................................................................CCTACTCTCCAAGGGTCG......................................................................................................................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------1.00--------
....................................................................................TTTGCCTACCCAGCCAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00--------------------------------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................................................................................................................................ATGCCGACATCCTCCTA............................................................................................................................................. 171.000.00-------------------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCCTCCTGCCCAAAG.................................................. 191.000.00-----------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................TGGGAGATATCTTGACTC.......................................................................................................................................................... 181.000.00---------------------------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................AAGCCTGGCACAGAGTGAGGGACGAGTGCTC........................................................................................................................................................................... 311.000.00--------------------------------------------------------------------------------------1.00---------------