ID: uc003bvv.2_intron_13_0_chr3_10420095_r.3p
GENE: (6)
chr3:10420045-10420294-


(1)
AGO2.ip 		(9)
BRAIN 		(2)
BREAST 		(3)
CELL-LINE 		(1)
CERVIX 		(10)
LIVER 		(2)
OTHER 		(4)
SKIN 		(1)
UTERUS

Sense strand
CACTGGGATCCATAGCTCCGGCTGGAAGAGGCAGGCCCCCATCACAGGACTTCTGCACCAGCCATGCGGGGCTCAGTCCAGGCAGTCAGCACCTACCCTGGGCAGGCAGGGGTGGGTGCCAGCGTCTCCACCCTGTGGGCTGACCTGCATGTGTGTCTATGTGTCTGTGTGTATGCACGTGCGTGATCTGCCCCCTGCAGCCAAACAACAGGACGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGT
.........................................................................((...(((((((((.(((((((((((.........)))))))))))(((.((....)).)))..))))).))))..))...................................................................................................
........................................................................73.....................................................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343334GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040023(GSM532908)
G575T. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTGT..............................................................................................23132.0032.006.002.003.001.004.003.003.001.001.00--2.00--1.002.00-1.00-1.00-------1.00------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTGA..............................................................................................23112.007.005.001.004.00---------------1.00-----1.00---------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTG...............................................................................................2217.007.00-1.00--2.001.00--2.00---1.00---------------------
......................................................................................................................................GTGGGCTGACCTGCATGTGT................................................................................................2014.004.001.00-----1.00--1.00----------------1.00-------
....................................................................................................................................................................................................................ACGGGGCAGCCGCCAACGG...................193.000.00-------------2.00-----------------1.00--
......................................................................................................................................GTGGGCTGACCTGCATGTGTGT..............................................................................................2213.003.00-------1.00---------1.00------------1.00---
.......................................................................................................................................TGGGCTGACCTGCATGTGTGT..............................................................................................2113.003.00-------1.00--------2.00-----------------
....................................................................................................................................CTGTGGGCTGACCTGCATGTGTGT..............................................................................................2413.003.002.00------1.00--------------------------
...................................................................................................................................CCTGTGGGCTGACCTGCATG...................................................................................................2012.002.001.00-----1.00---------------------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTGTAA............................................................................................2512.0032.002.00---------------------------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTGTTA............................................................................................2512.0032.00---------1.00-1.00----------------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGT................................................................................................2112.002.00-2.00--------------------------------
.................................................................................................................................................................................................................................CATGGAGATGCAGCCCCTCAA....2112.002.00---2.00------------------------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTGTT.............................................................................................2412.0032.00------------1.00-----1.00---------------
.....GGATCCATAGCTCCGTGG...................................................................................................................................................................................................................................181.000.00----------1.00-----------------------
..................CGGCTGGAAGAGGCAGGCC.....................................................................................................................................................................................................................1911.001.00------------1.00---------------------
.................................................................................................................................................................................................................AGGACGGGGCAGCCGCCATGGAGATGCAGC...........3011.001.00-----1.00----------------------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTAT..............................................................................................2311.002.00-1.00--------------------------------
.............................................................................CCAGGCAGTCAGCACCG............................................................................................................................................................171.000.00----------1.00-----------------------
...............................................................................................................................................................................................................ACAGGACGGGGCAGCCGCCATGG....................2311.001.00---1.00------------------------------
......................................................................................................................................GTGGGCTGACCTGCATGTGTG...............................................................................................2111.001.00-1.00--------------------------------
.............AGCTCCGGCTGGAAGAGGCAGGGCC....................................................................................................................................................................................................................251.000.00---1.00------------------------------
...............................................................ATGCGGGGCTCAGTCCAG.........................................................................................................................................................................1811.001.00--------1.00-------------------------
...........ATAGCTCCGGCTGGAAGAGGGA.........................................................................................................................................................................................................................221.000.00----------------------------1.00-----
......................................................................................................................................GTGGGCTGACCTGCATGTGTGTCTATG.........................................................................................2711.001.00-----1.00----------------------------
....................................................................................................................................CTGTGGGCTGACCTGCATG...................................................................................................1911.001.001.00---------------------------------
.................CCGGCTGGAAGAGGCGGCG......................................................................................................................................................................................................................191.000.00-----------------------------1.00----
......................................................................................................................................GTGGGCTGACCTGCATGTGTGTC.............................................................................................2311.001.00-----------------------1.00----------
......................................................GCACCAGCCATGCGGGGCTCAGTCCA..........................................................................................................................................................................2611.001.00---1.00------------------------------
...........................................................................................................................................................................................................AACAACAGGACGGGGCAGAC...........................201.000.00---1.00------------------------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTTA..............................................................................................2311.002.00---------1.00------------------------
....................................................................................................................................CTGTGGGCTGACCTGCATGTGTGTCT............................................................................................2611.001.00-------------------1.00--------------
.....................................................................................................................................TGTGGGCTGACCTGCATGTGTGTTT............................................................................................2511.0032.00--------------1.00-------------------
...............................................................................AGGCAGTCAGCACCTCA..........................................................................................................................................................171.000.00--------------------1.00-------------
.............AGCTCCGGCTGGAAGCGG...........................................................................................................................................................................................................................181.000.00-1.00--------------------------------
.....GGATCCATAGCTCCGGGG...................................................................................................................................................................................................................................181.000.00----------1.00-----------------------
...................................................................................................................................CCTGTGGGCTGACCTGCATGTG.................................................................................................2211.001.00------1.00---------------------------
...............................................................................................................................................................................CACGTGCGTGATCTGCCCC........................................................1911.001.001.00---------------------------------
...................................................................................................................................CCTGTGGGCTGACCTGCATGTGT................................................................................................2311.001.00----1.00-----------------------------
.............................................................CCATGCGGGGCTCAG..............................................................................................................................................................................1570.140.14---------------------------------0.14

Antisense strand
CACTGGGATCCATAGCTCCGGCTGGAAGAGGCAGGCCCCCATCACAGGACTTCTGCACCAGCCATGCGGGGCTCAGTCCAGGCAGTCAGCACCTACCCTGGGCAGGCAGGGGTGGGTGCCAGCGTCTCCACCCTGTGGGCTGACCTGCATGTGTGTCTATGTGTCTGTGTGTATGCACGTGCGTGATCTGCCCCCTGCAGCCAAACAACAGGACGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGT
.........................................................................((...(((((((((.(((((((((((.........)))))))))))(((.((....)).)))..))))).))))..))...................................................................................................
........................................................................73.....................................................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343334GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040023(GSM532908)
G575T. (cervix)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
.........................................................................................................GCAGGGGTGGGTGCCGGG............................................................................................................................... 181.000.00--------------------------------1.00-
.........................................................................................................GCAGGGGTGGGTGCCGGGG.............................................................................................................................. 191.000.00----------------------1.00-----------
....................................................CTGCACCAGCCATGCTA..................................................................................................................................................................................... 171.000.00-------------------------1.00--------
..................................................................CGGGGCTCAGTCCAGGACAA.................................................................................................................................................................... 201.000.00-1.00--------------------------------
.........................................................................................................GCAGGGGTGGGTGCCGG................................................................................................................................ 171.000.00---------------------1.00------------