ID: uc003brc.2_intron_2_0_chr3_8810278_r.5p
GENE: (1)
chr3:8810717-8810966-


(1)
B-CELL
(1)
BRAIN
(2)
BREAST
(6)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(4)
HEART
(1)
LIVER
(1)
OTHER
(24)
SKIN

Sense strand
AACTTCCCCGGGGGGAGTCAACTTTAGGTTCGCCTGCGGACTCGGTGCAGGTAGCTGGGTGCTAAGCAGGGGTGGACGGGATGGCTAGGGCCGGTGGAGCCATCGGGACCCGAGTGGAGGTGGTGGGGTGCCTCGCACTCCTTGTTCCTGGAGGAGCTCGGGGTGTTCCGAGAGATTGTAAAGTGACTTCTCGGGATTGAGACTCAGAGTCCTTGATTATCTGGGTCCAAAGCGCAAGTCAGGGGTTCCA
...........................................................................................................................(((((..(((((..((((((.......))))))..)))))..)))))................................................................................
.....................................................................................................................118....................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
..........................................................................................................................GTGGGGTGCCTCGCA.................................................................................................................15234.5034.508.004.002.002.002.502.001.000.50-1.501.001.001.50-1.00---0.50--1.00----1.00--0.50-0.500.50-0.50-0.500.500.50-0.50--
..........................................................................................................................GTGGGGTGCCTCGCAGC...............................................................................................................1725.5034.500.500.500.50----0.50-0.50---1.00-0.50------0.50-----0.50----0.50---------
..........................................................................................................................GTGGGGTGCCTCGCAGCTT.............................................................................................................1925.0034.50--0.500.50--0.50----0.50-0.50-0.50--------------0.50----0.50---0.50--0.50
..........................................................................................................................GTGGGGTGCCTCGCAG................................................................................................................1624.0034.500.50--0.500.500.50-1.00----------0.50----------------------0.50-
..........................................................................................................................GTGGGGTGCCTCGCAGCT..............................................................................................................1821.5034.50------1.00---------------0.50--------------------
...................................................................................................................GGAGGTGGTGGGGTGTCTG....................................................................................................................191.000.00----------------1.00--------------------------
........................................................................................................................................................GGAGCTCGGGGTGTTTA.................................................................................171.000.00----------1.00--------------------------------
...................................................................................................................GGAGGTGGTGGGGTGCACAG...................................................................................................................201.000.00-----------------------1.00-------------------
.................................................................................................................................................TCCTGGAGGAGCTCGGGAA......................................................................................191.000.00--------1.00----------------------------------
..............................................GCAGGTAGCTGGGTGGTTG.........................................................................................................................................................................................191.000.00--------1.00----------------------------------
............................................................................................................................................CTTGTTCCTGGAGGACCTC...........................................................................................191.000.00--------------------1.00----------------------
..............................................................................GGATGGCTAGGGCCGCCCA.........................................................................................................................................................191.000.00---------------------------1.00---------------
...........................................................................................................................................................................................................TCAGAGTCCTTGATTCCGG............................191.000.00-----------------1.00-------------------------
..........................................................................................................................GTGGGGTGCCTCGCAGCTA.............................................................................................................1920.5034.50--0.50----------------------------------------
..........................................................................................................................GTGGGGTGCCTCGCAAA...............................................................................................................1720.5034.50----------------------------0.50--------------

Antisense strand
AACTTCCCCGGGGGGAGTCAACTTTAGGTTCGCCTGCGGACTCGGTGCAGGTAGCTGGGTGCTAAGCAGGGGTGGACGGGATGGCTAGGGCCGGTGGAGCCATCGGGACCCGAGTGGAGGTGGTGGGGTGCCTCGCACTCCTTGTTCCTGGAGGAGCTCGGGGTGTTCCGAGAGATTGTAAAGTGACTTCTCGGGATTGAGACTCAGAGTCCTTGATTATCTGGGTCCAAAGCGCAAGTCAGGGGTTCCA
...........................................................................................................................(((((..(((((..((((((.......))))))..)))))..)))))................................................................................
.....................................................................................................................118....................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191586(GSM715696)
197genomic small RNA (size selected RNA from . (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
...............................................................................................................................................................GGGGTGTTCCGAGAGC........................................................................... 162.000.00------------------------1.001.00-----------------
..................................................................................................................................CCTCGCACTCCTTGTTAGA..................................................................................................... 191.000.00-------------------1.00-----------------------