ID: uc003bmh.2_intron_5_0_chr22_50970541_r
GENE: ODF3B(1)
chr22:50970491-50970955-


(1)
AGO2.ip
(5)
B-CELL
(3)
BRAIN
(17)
BREAST
(20)
CELL-LINE
(7)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(2)
HELA
(5)
LIVER
(2)
OTHER
(1)
RRP40.ip
(30)
SKIN
(1)
XRN.ip

Sense strand
ATGTCCAGCCACGTCGCTTTGTTTTCCCACGCTAGGAGCTACCACAACAGGTCAGTGCACCTCGGGGCACCGGGTCCCCCACGCAGGCCCTTCCCGGGGCACCCTTTCCCAACAGCACGAAAATCTCCTGCCCCCACCCCACCCCCAGGTGATTCCCTTCACCAAGTCTGGGTCTAGACTTGGCCCCCGCGAGTTCACGTCCCTGCCTAATGCGCCTGGAGTCCGGGTGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTTTTGCTGGCGCCAGGGATACGGTCCAGGCCCCGCCCCGCCCCGCGCTGATCCCAGGGTAGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCTGTCCGCAGGTGCTGCGAGCCGTAAGCGCCCCCCACCCGCGCTATGGGCTCGGACGCCT
..........................................................((((.((((....(((((.........))))).....((((((...((((..........))))......)))))).......)))).))))...........................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.........................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189784SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR038854(GSM458537)
MM653. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR040040(GSM532925)
G612N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335
.............................................................................................................CAACAGCACGAAAATATTG.................................................................................................................................................................................................................................................................................................................................................1915.000.00-8.006.00------------------------------------------1.00--------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATACTG.................................................................................................................................................................................................................................................................................................................................................196.000.00-3.003.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTCTGTCCGCAGGTG...............................................1815.005.005.00-----------------------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATGG.................................................................................................................................................................................................................................................................................................................................................193.000.00-2.001.00---------------------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATAG.................................................................................................................................................................................................................................................................................................................................................193.000.00-1.002.00---------------------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATCG.................................................................................................................................................................................................................................................................................................................................................192.000.00--1.00-----------------------------------------------------1.00---------------------------------------------
.............................................................................................................CAACAGCACGAAAATCTTC.................................................................................................................................................................................................................................................................................................................................................192.000.00-1.001.00---------------------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATACAG.................................................................................................................................................................................................................................................................................................................................................192.000.00--2.00---------------------------------------------------------------------------------------------------
...................................................TCAGTGCACCTCGGGGCACCGGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................2512.002.00------------------------------2.00-----------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATTC.................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------
....................GTTTTCCCACGCTAGGAGCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................GTCTGGGTCTAGACTTGGC.........................................................................................................................................................................................................................................................................................1911.001.00------------------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CCCCGCGCTGATCCCAGGG.....................................................................................................................1911.001.001.00-----------------------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATAATA.................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................GTTCACGTCCCTGCCCTC...............................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------1.00---------
.....................................................................................................................................................................................................................................................................CACACAGCCGGGAAGGAAGCT.......................................................................................................................................................................................2111.001.00-----------------------------1.00------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATCTTT.................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTCTGTCCGCAGGGG...............................................181.000.001.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................AATTTGCGGTGCAGGGGCC..........................................................................1911.001.00---------------------------------------------------------------------------------1.00--------------------
.....................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGGTGCAGGGGCC..........................................................................1811.001.00----------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGCAGGTGCTGCGAG........................................1811.001.00-------------------------1.00----------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCCCCACCCGCGCGG...............181.000.00-------------------------------------------------------------------------------------------1.00----------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCTATGGGCTCGGAC....1911.001.00--------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTCTGTCCGCAGC.................................................161.000.00--------------------------------------------------1.00---------------------------------------------------
........................................................................GGTCCCCCACGCAGGGTC.......................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------1.00--------------------------------------------------------------------------------------------
................................................AGGTCAGTGCACCTCGG................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................TGCGGTGCAGGGGCCCACA......................................................................191.000.00---------------------1.00--------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CAAGAATTTGCGGTGCAGGTGC...........................................................................221.000.00----------------------------------------------------------------------1.00-------------------------------
...............................................................................................................ACAGCACGAAAATCTCCTGCCCCCACC.......................................................................................................................................................................................................................................................................................................................................2711.001.00-----------------------------1.00------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................GCTCCCCAAGAATTTGCGGTG..................................................................................2111.001.00-------------------------------------------------1.00----------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATA..................................................................................................................................................................................................................................................................................................................................................181.000.00-1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CGGGTGATGGCCCTGGAT................................................................................................................................................................................................................................1811.001.00------------------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................GCGCTGATCCCAGGGTAGTG................................................................................................................2011.001.00--------------------------------------------------------------1.00---------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................GGGCCGCGGCCACCGCCTTCT..........................................................2111.001.00----------------------------------------------------------------1.00-------------------------------------
.............................................................................................................CAACAGCACGAAAATAATT.................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------
............................ACGCTAGGAGCTACCACAACA................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------1.00---------------------------------------------------------
....................................................................................AGGCCCTTCCCGGGGGGCC..........................................................................................................................................................................................................................................................................................................................................................................191.000.00------------------------1.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCTTCTGTCCGCAGG.................................................1911.001.00------1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................CAGGGTAGTGGGAAAGTGC.......................................................................................................1911.001.00--------------1.00---------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATTT.................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00---------------------------------------------------------------------------------------------------
...............................................................................CACGCAGGCCCTTCCCGTGGA.............................................................................................................................................................................................................................................................................................................................................................................211.000.00----------------------------1.00-------------------------------------------------------------------------
................................TAGGAGCTACCACAACA................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-----1.00------------------------------------------------------------------------------------------------
.....................................GCTACCACAACAGGTCAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00---------------1.00--------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATAATG.................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------------------------------------
.............................................................................................................CAACAGCACGAAAATATTA.................................................................................................................................................................................................................................................................................................................................................191.000.00--1.00---------------------------------------------------------------------------------------------------
............................................................CTCGGGGCACCGGGTCCCCCAC...............................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGGGCCGCGGGC....................................................................171.000.00-------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGTCCGCAGGTGC..............................................1720.500.50-------------------------------------------------------------------------------------------------0.50----
...................................................................................................CACCCTTTCCCAACAG..............................................................................................................................................................................................................................................................................................................................................................1650.200.20-----------------------------------------------------------------------------------------------------0.20

Antisense strand
ATGTCCAGCCACGTCGCTTTGTTTTCCCACGCTAGGAGCTACCACAACAGGTCAGTGCACCTCGGGGCACCGGGTCCCCCACGCAGGCCCTTCCCGGGGCACCCTTTCCCAACAGCACGAAAATCTCCTGCCCCCACCCCACCCCCAGGTGATTCCCTTCACCAAGTCTGGGTCTAGACTTGGCCCCCGCGAGTTCACGTCCCTGCCTAATGCGCCTGGAGTCCGGGTGATGGCCCTGGATCCGCTCCCGGCCCCAAGCTCCACACAGCCGGGAAGGAAGCTCGCGTTTGTTTTGCTGGCGCCAGGGATACGGTCCAGGCCCCGCCCCGCCCCGCGCTGATCCCAGGGTAGTGGGAAAGTGCGCTCCCCAAGAATTTGCGGTGCAGGGGCCGCGGCCACCGCCTTCTGTCCGCAGGTGCTGCGAGCCGTAAGCGCCCCCCACCCGCGCTATGGGCTCGGACGCCT
..........................................................((((.((((....(((((.........))))).....((((((...((((..........))))......)))))).......)))).))))...........................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.........................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR189784SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040028(GSM532913)
G026N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR189783SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191565(GSM715675)
92genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR189785SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR038854(GSM458537)
MM653. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR038860(GSM458543)
MM426. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR040040(GSM532925)
G612N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR343335
.....................................................................................................................................................................................................................CATCACCCGGACTCCAGGC......................................................................................................................................................................................................................................... 1919.009.008.00-------------------1.00---------------------------------------------------------------------------------
....................................................................................AGGCCCTTCCCGGGGCACCCTTA...................................................................................................................................................................................................................................................................................................................................................................... 233.000.00-----------3.00------------------------------------------------------------------------------------------
................TAGCGTGGGAAAACAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................... 1813.003.003.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................AGGGACGTGAACTCGCGG..................................................................................................................................................................................................................................................................... 1812.002.00-------------1.001.00---------------------------------------------------------------------------------------
.......................................................................................................................................................................................GACGTGAACTCGCGGGGG........................................................................................................................................................................................................................................................................ 1812.002.00-------1.00----------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................CCCGGCTGTGTGGAGCTTGG................................................................................................................................................................................................ 2012.002.00----------------------------------------1.00----------------------------------------------1.00--------------
.............................................................................................................................................................................................GCAGGGACGTGAACTCG................................................................................................................................................................................................................................................................... 1712.002.00-------------1.00----------------------------------------------------1.00-----------------------------------
..................................................................................................................................................................................................................ATCACCCGGACTCCAGGCGCA.......................................................................................................................................................................................................................................... 2112.002.00------------2.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................TCTGGGTCTAGACTTGAC......................................................................................................................................................................................................................................................................................... 182.000.00---------------------------2.00--------------------------------------------------------------------------
...........................................................................................................................................................................................GCAGGGACGTGAACTCGCG................................................................................................................................................................................................................................................................... 1912.002.00-----------------------1.00-----------------------------1.00------------------------------------------------
...........................................................................................................................................................................................................................................................................................................GGGCCTGGACCGTATCCCTGGCG............................................................................................................................................... 2312.002.00----2.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CGGCTGTGTGGAGCTTGGGGCCGGGAG.................................................................................................................................................................................................. 2712.002.00--------------------------1.00-------------------------------1.00-------------------------------------------
..........................................................................................................................................................................................................................................................CTGTGTGGAGCTTGGGGC..................................................................................................................................................................................................... 1821.501.50----------------------------------------------------------------------------------------------0.500.50--0.50---
............................................................................................................................................................................................GCGCATTAGGCAGGGACGTGAACTCGC.......................................................................................................................................................................................................................................................... 2711.001.00------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................TAGGCAGGGACGTGAACTCGCGGGGGCCAAG................................................................................................................................................................................................................................................................ 3111.001.00---1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CGGCTGTGTGGAGCTTGGGGCCGGGAGC.................................................................................................................................................................................................. 2811.001.00-----------------------------------------1.00------------------------------------------------------------
................................................................................................................................................................................AACTCGCGGGGGCCAAGTC.............................................................................................................................................................................................................................................................................. 1911.001.00--------------------------------------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................................................CCTGGATCCGCTCCCGCC..................................................................................................................................................................................................................... 181.000.00-----------------------------------------------1.00------------------------------------------------------
..........................................................................................................................................................................................GCAGGGACGTGAACTCGCGG................................................................................................................................................................................................................................................................... 2011.001.00----1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................AGCTTCCTTCCCGGCTGTGTGGA....................................................................................................................................................................................... 2311.001.00-----1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCTCGCAGCACCTGCG.................................... 1911.001.00-------------------------------------------------------1.00----------------------------------------------
....................................................................................................................................................................................................................ATCACCCGGACTCCAGGCG.......................................................................................................................................................................................................................................... 1911.001.00--------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................CGGACAGAAGGCGGTGGCCGCGGCCCCT..................................................... 2811.001.00--------------------------------1.00---------------------------------------------------------------------
..............................................................................................................................................................................................AGGCAGGGACGTGAACTC................................................................................................................................................................................................................................................................. 1811.001.00--------------------------------------------------------------------------------1.00---------------------
...........................................................................................................................................................................................................................................GCCGGGAGCGGATCCAG..................................................................................................................................................................................................................... 1711.001.00---------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................TAGGCAGGGACGTGAACTCGCGGG................................................................................................................................................................................................................................................................ 2411.001.00-------------------------------------------------------------------------------1.00----------------------
...........................................................................................................................................................................................................................AGGGCCATCACCCGGACT.................................................................................................................................................................................................................................... 1811.001.00---------------------------------------------------------------------1.00--------------------------------
........................................................................................................................TCACCTGGGGGTGGGGTGGGGGCAGGAGATTT......................................................................................................................................................................................................................................................................................................................... 3211.001.00----------------------1.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................TCCCGGCTGTGTGGAGC............................................................................................................................................................................................... 1711.001.00---------------------------------------1.00--------------------------------------------------------------
...............................................................................................................................................................................................................................................................................GGAAGGAAGCTCGCGAAA................................................................................................................................................................................ 181.000.00---------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................GGGACGTGAACTCGCGGGGGCCAA...................................................................................................................................................................................................................................................................... 2411.001.00----------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................AGGGACGTGAACTCGCGGG..................................................................................................................................................................................................................................................................... 1911.001.00----------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................CCGCAAATTCTTGGGGAGCGCACTTT.................................................................................... 2611.001.00----------------------------------------------1.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................GCTGTGTGGAGCTTGGGGCCGG.................................................................................................................................................................................................... 2211.001.00--------------------------1.00---------------------------------------------------------------------------
............................................................................................................................ACCTGGGGGTGGGGTGGGGGCAGGAG........................................................................................................................................................................................................................................................................................................................... 2611.001.00---1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................TTCCCGGCTGTGTGGAGC.............................................................................................................................................................................................. 1811.001.00----------------------------------------------------------------------------------1.00-------------------
.................................................................................................................................................................................................................................................................CTTCCCGGCTGTGTGGAGC............................................................................................................................................................................................. 1911.001.001.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................ATTAGGCAGGGACGTGAACTCGCGGG.............................................................................................................................................................................................................................................................. 2611.001.00-----------------------1.00------------------------------------------------------------------------------
............................................................................................................................................................................................GCAGGGACGTGAACTCGC................................................................................................................................................................................................................................................................... 1811.001.00--------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................GTGTGGAGCTTGGGGCCG....................................................................................................................................................................................................... 1811.001.00-----1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CGGACTCCAGGCGCATTAGG................................................................................................................................................................................................................................................ 2011.001.00---------------1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................TGGAGCTTGGGGCCGGGAGCGGAT.......................................................................................................................................................................................................... 2411.001.00-------------------------------------1.00----------------------------------------------------------------
..........................................................................................................................................................................................CAGGGACGTGAACTCGCGG.................................................................................................................................................................................................................................................................... 1911.001.00-------------1.00----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ATCCAGGGCCATCACCCGGACT................................................................................................................................................................................................................................ 2211.001.00------------------------------------------------------------1.00-----------------------------------------
.................TTTGTTTTCCCACGCAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00-------------------------------------------------------------1.00----------------------------------------
...........................................................................................................................................................................................................................................................GCTGTGTGGAGCTTGGGG.................................................................................................................................................................................................... 1821.001.00----1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCTCGCAGCACCTG................................... 1811.001.00------------------------------------------------------1.00-----------------------------------------------
............................................................................................................................................................................................CAGGGACGTGAACTCGC.................................................................................................................................................................................................................................................................... 1711.001.00------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................CGTGCTGTTGGGAAAGGG.......................................................................................................................................................................................................................................................................................................................................................... 1811.001.00----1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................GCGCGGGGCGGGGCGGGG................................................................................................................................ 1801.001.00----------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................CCTGCGGACAGAAGGCGGTGGCCGC................................................. 2511.001.00-------------------------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................ATTAGGCAGGGACGTGAACTCGC.............................................................................................................................................................................................................................................................. 2311.001.00----------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................GCGCATTAGGCAGGGACGTGA.......................................................................................................................................................................................................................................................... 2111.001.00--------1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................TGGAGCTTGGGGCCGGGA.......................................................................................................................................................................................................... 1811.001.00--------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................CCTGGGATCAGCGCGGGGC...................................................................................................................... 1911.001.00-----------------------------------1.00------------------------------------------------------------------
..................................................................................................................................................................................................................CACCCGGACTCCAGGCGCA............................................................................................................................................................................................................................................ 1911.001.00------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................CGGGAGCGGATCCAGGGCCAT....................................................................................................................................................................................................................... 2111.001.00---------1.00--------------------------------------------------------------------------------------------
............................................................................................................................ATCACCTGGGGGTGGGGTGGGGGCAGGAG........................................................................................................................................................................................................................................................................................................................ 2911.001.00---1.00--------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................CCCGGCTGTGTGGAGCTTGGG................................................................................................................................................................................................ 2111.001.001.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................ATCCCTGGCGCCAGCAA............................................................................................................................................................ 1711.001.00------------------------------------------------------------------------------------------1.00-----------
.......................................................................................................ATTTTCGTGCTGTTGGGAAAG..................................................................................................................................................................................................................................................................................................................................................... 2111.001.00-----------------------------------------------------------1.00------------------------------------------
.................................................................................................................................................................................GACGTGAACTCGCGGGGGCCAAGT........................................................................................................................................................................................................................................................................ 2411.001.00------------------------------------------------------------------------------1.00-----------------------
....................................TGCACTGACCTGTTGTGGTAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................... 2311.001.00----------------1.00-------------------------------------------------------------------------------------
...............CTAGCGTGGGAAAACAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 2011.001.00-----------------------------------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................................................................CGGCTGTGTGGAGCTTGGGGC.................................................................................................................................................................................................. 2111.001.00----------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CGCTCCCGGCCCCAATAT............................................................................................................................................................................................................. 181.000.00-----------------------------------------------------------------1.00------------------------------------
..................................................................................................................................CTGGGGGTGGGGTGGGGG............................................................................................................................................................................................................................................................................................................................. 1801.001.00------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TGCGGACAGAAGGCGGTGGCC................................................... 2111.001.00---------1.00--------------------------------------------------------------------------------------------
.............................................................................................................................TCCTGCCCCCACCCCACCCCCAGGTGATT....................................................................................................................................................................................................................................................................................................................... 291.000.00----------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGCTCGGACGCTGG 181.000.00-----------------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................CTGTGTGGAGCTTGGGGCCGGGAG..................................................................................................................................................................................................... 2411.001.00---------------------------------------------------------------1.00--------------------------------------
.............................................................................................................................................................................................................................................GGATCCGCTCCCGGCCCCAAGCTCCACACCG..................................................................................................................................................................................................... 311.000.00-----------------1.00------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................CCCGGCTGTGTGGAGCTTGGGGCCGG................................................................................................................................................................................................ 2611.001.00-------1.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................CTGTGTGGAGCTTGGGGCCGGGAGC..................................................................................................................................................................................................... 2511.001.00-------------------------------------------------------------------1.00----------------------------------
.......................................................................................................................................................CCAGACTTGGTGAAGGGAAT...................................................................................................................................................................................................................................................................................................... 2011.001.00---------------------------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................GTGAACTCGCGGGGGCCAAG........................................................................................................................................................................................................................................................................... 2011.001.00-------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGCGGGTGGGGGG............... 1611.001.00---1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................CTGTGTGGAGCTTGGGGCCGG..................................................................................................................................................................................................... 2111.001.00-----1.00------------------------------------------------------------------------------------------------
......................................................................................................................GAAAATCTCCTGCCCCCCAGT...................................................................................................................................................................................................................................................................................................................................... 211.000.00---------------------------------------------------------------------------1.00--------------------------
...........................................................................................................................TCACCTGGGGGTGGGGTGGGGGCAGGAGA......................................................................................................................................................................................................................................................................................................................... 2911.001.00---1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................ACCGCAAATTCTTGGGGAG................................................................................... 1911.001.00------------------------------------------------------------------------------------1.00-----------------
..................................................................................................................................................................................................................CCCGGACTCCAGGCGCA.............................................................................................................................................................................................................................................. 1711.001.00------------------------1.00-----------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................CGGCTGTGTGGAGCTTGGGG.................................................................................................................................................................................................. 2011.001.00----1.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................AGCGCGGGGCGGGGCGGGGCCTGGACCG............................................................................................................................... 2811.001.00---1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GCCATCACCCGGACTCCAGGCG....................................................................................................................................................................................................................................... 2211.001.00--------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................................................................................GGGACGTGAACTCGCGGGGG...................................................................................................................................................................................................................................................................... 2011.001.00---------------------------------------------------1.00--------------------------------------------------
......................................................................................GCCCTTCCCGGGGCACCCTA....................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------------1.00-------------------------
.................................................................................................................................................................................................................................................GTGGAGCTTGGGGCCGGGAGCGG......................................................................................................................................................................................................... 2311.001.00--------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCGGACAGAAGGCGGTG................................................ 2111.001.00-----------------------------------------------------------------------------------1.00------------------
...........................................................................................................................................................................................CATTAGGCAGGGACGTGAACTCGCG............................................................................................................................................................................................................................................................. 2511.001.00--------------------------------------------------------------------------------------1.00---------------
................CCTAGCGTGGGAAAACAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................. 2011.001.00-------------------------------------------------------------------------1.00----------------------------
...........................................................................................................................................................................................................ACTCCAGGCGCATTAGGCA................................................................................................................................................................................................................................................... 1911.001.00-----------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................................................................................................................................................................................................CCGCCCCGCCCCGCGTT............................................................................................................................... 171.000.00---------------------------------------------------------1.00--------------------------------------------
............................................................................................................................................................................................................................................................CGGCTGTGTGGAGCTTGGG.................................................................................................................................................................................................. 1911.001.00------1.00-----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................GCGCATTAGGCAGGGACGTGAACTCG.......................................................................................................................................................................................................................................................... 2611.001.00----------------------------------------------------------------------------------------1.00-------------
....................................................................................................................................................................................................CCGGCTGTGTGGAGCTTGGGGCCGGGAGCGGATCCAGGGCCATCACCCGGACTCCAGGCGCATTAGGCAGGGACGT................................................................................................................................................................................................. 7611.001.00-------------------------------------------------------------------------------------1.00----------------
..................................................................................................................................................................................................................................................AGCTTGGGGCCGGGAGCG............................................................................................................................................................................................................. 1811.001.00-------------------------------------------1.00----------------------------------------------------------
.......................................................................................................................AAAATCTCCTGCCCCATTG....................................................................................................................................................................................................................................................................................................................................... 191.000.00--1.00---------------------------------------------------------------------------------------------------
.....................................................................................................................GTGGGGGCAGGAGATTTTCG........................................................................................................................................................................................................................................................................................................................................ 2011.001.00-------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCCGGACTCCAGGCG............................................................................................................................................................................................................................................. 1611.001.00-------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CGCTCCCGGCCCCAAGCTTATC......................................................................................................................................................................................................... 221.000.00------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................CAGGGACGTGAACTCGCGGG.................................................................................................................................................................................................................................................................... 2011.001.00-----------------------------------------------------------------------1.00------------------------------
...........................................................................................................................................................................................................................................................CTGTGTGGAGCTTGGGG..................................................................................................................................................................................................... 1730.670.670.67-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................GTGTGGAGCTTGGGGC....................................................................................................................................................................................................... 1650.600.60---------------------------------------------------------------------------------------------0.60--------
.................................................................................................................................................................................................................................................GCTTGGGGCCGGGAGCGG.............................................................................................................................................................................................................. 1820.500.50---------------------------------------------------------------------------------------------------0.50--
.........................................................................................................................................................................................................................................................GTGTGGAGCTTGGGGCC....................................................................................................................................................................................................... 1720.500.50------------------------------------------------------------------------------------------------0.50-----
.........................................................................................................................................................................................................................................................................................................................................................................GCAAATTCTTGGGGAGCG...................................................................................... 1820.500.500.50-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................GGAGCTTGGGGCCGGGAGC........................................................................................................................................................................................................... 1930.330.33---------0.33--------------------------------------------------------------------------------------------
...........................................................................................................................GTGGGGTGGGGGCAGGAGA................................................................................................................................................................................................................................................................................................................................... 1940.250.25----------------------------------------------------------------------------------------------------0.25-