ID: uc003bll.1_intron_4_0_chr22_50926772_f.5p
GENE: MIOX(5)
chr22:50926722-50926971+


(1)
B-CELL 		(10)
BRAIN 		(14)
BREAST 		(1)
CELL-LINE 		(11)
CERVIX 		(1)
FIBROBLAST 		(1)
HELA 		(1)
LIVER 		(2)
OTHER 		(3)
SKIN

Sense strand
GGCTCCTGCACGACCTGGGGAAGGTCCTGGCCCTGTTCGGGGAGCCCCAGGTAAGAGTTGGAAGTGGAGGGTGAGGAGGCTGCATGTTGAGGCAAGGTGGGGGTGGAGTGGCCTTGGTGCTTGGCCTGGGATACTACCTGGGGGACAGGCCAGTGCACCCCCCACGGCCCCCCGACGGCTGCCTGTCCCTCTGGTGGCCTCGGTGCTTGGCCTGGGATACTACCTGGGGGACAGGCCAGTGCACCCCCCA
..............................................................................(((.((...)).)))...((.((((.((.((((....(((((((((((((.....((....))....)))))))).)))))..))))..)))))).))..........................................................................
..................................................................67.............................................................................................................178......................................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577590(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040024(GSM532909)
G613N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532876(GSM532876)
G547T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR040029(GSM532914)
G026T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.......................................................................TGAGGAGGCTGCATGTTGGGTT.............................................................................................................................................................2239.000.007.004.004.006.003.003.003.002.00--2.00----1.00--1.00--1.00--1.00--------------1.00-----
.......................................................................TGAGGAGGCTGCATGTTGGTT..............................................................................................................................................................2139.000.009.005.005.00-4.003.001.001.001.002.00-3.001.001.00---1.00----------1.00-----------1.00----
.......................................................................TGAGGAGGCTGCATGTTGGGT..............................................................................................................................................................2133.000.007.005.001.003.004.004.00-3.001.00--1.001.001.00-------------------1.00----1.00------
.......................................................................TGAGGAGGCTGCATGTTGGTTT.............................................................................................................................................................2233.000.0010.004.005.00-3.001.003.001.00----1.00--1.001.00-1.00----2.00---------------------
.......................................................................TGAGGAGGCTGCATGTTGGTTA.............................................................................................................................................................2215.000.001.002.001.002.00----2.001.001.00--1.00-1.001.002.00---------------------------
.......................................................................TGAGGAGGCTGCATGTTGGGTA.............................................................................................................................................................2210.000.001.00-2.003.00--1.00--1.001.00----------1.00-----------------------
.......................................................................TGAGGAGGCTGCATGTTGAGTT.............................................................................................................................................................224.000.002.001.00------1.00------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGGG...............................................................................................................................................................204.000.001.001.00---2.00---------------------------------------
.......................................................................TGAGGAGGCTGCATGTTTGGT..............................................................................................................................................................2134.000.33-1.000.331.33-0.67------------0.67--------------------------
.......................................................................TGAGGAGGCTGCATGTTGGT...............................................................................................................................................................203.000.00-----1.00--1.00-------------------------1.00----------
.......................................................................TGAGGAGGCTGCATGTTGAGT..............................................................................................................................................................213.000.00-1.00-1.00------------1.00----------------------------
.......................................................................TGAGGAGGCTGCATGTTGATTT.............................................................................................................................................................222.000.00---------1.00--1.00--------------------------------
.......................................................................TGAGGAGGCTGCATGTTGATTA.............................................................................................................................................................222.000.00----------1.00-----------1.00----------------------
.......................................................................TGAGGAGGCTGCATGTTTGTT..............................................................................................................................................................2132.000.330.330.67----0.330.33----------------0.33--------------------
.............................................................................................................................................................CCCCCCACGGCCCCCGG............................................................................171.000.00--------------------1.00------------------------
.......................................................................TGAGGAGGCTGCATGTTGAGTA.............................................................................................................................................................221.000.00---1.00-----------------------------------------
......................................................................GTGAGGAGGCTGCATTGC..................................................................................................................................................................181.000.00---------------------------1.00-----------------
.......................................................................TGAGGAGGCTGCATGTTGAT...............................................................................................................................................................201.000.001.00--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGGTTG.............................................................................................................................................................221.000.00--------1.00------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGAGTTC............................................................................................................................................................231.000.00-------1.00-------------------------------------
.........................................................................AGGAGGCTGCATGTTGAGTT.............................................................................................................................................................201.000.00---1.00-----------------------------------------
.......................................................................TGAGGAGGCTGCATGTAGGG...............................................................................................................................................................201.000.001.00--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGATTC.............................................................................................................................................................221.000.00-1.00-------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGAGTTT............................................................................................................................................................231.000.001.00--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTATGG...............................................................................................................................................................201.000.00----1.00----------------------------------------
.......................................................................TGAGGAGGCTGCATGTGGGT...............................................................................................................................................................201.000.00----1.00----------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGGGTC.............................................................................................................................................................221.000.00----------------------1.00----------------------
.......................................................................TGAGGAGGCTGCATGTTGTTTA.............................................................................................................................................................221.000.001.00--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGGC...............................................................................................................................................................201.000.00-----------1.00---------------------------------
.......................................................................TGAGGAGGCTGCATGTTGAGTAA............................................................................................................................................................231.000.00--1.00------------------------------------------
.....................AGGTCCTGGCCCTGTTGAAT.................................................................................................................................................................................................................201.000.00--------------------------------1.00------------
...........................................................................................GCAAGGTGGGGGTGGAGAGCA..........................................................................................................................................211.000.00-------------------------------1.00-------------
................................................................................................................................................................CCCACGGCCCCCCGATCA........................................................................181.000.00-------------------------------------------1.00-
.......................................................................TGAGGAGGCTGCATGTGGGG...............................................................................................................................................................201.000.001.00--------------------------------------------
...........................TGGCCCTGTTCGGGGGCCA............................................................................................................................................................................................................191.000.00-------------------------------------1.00-------
.......................................................................TGAGGAGGCTGCATGTTGTCT..............................................................................................................................................................211.000.001.00--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTGG................................................................................................................................................................191.000.001.00--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTTGTA..............................................................................................................................................................2130.670.33--0.33---0.33--------------------------------------
.......................................................................TGAGGAGGCTGCATGTTTGT...............................................................................................................................................................2030.670.330.33-----0.33--------------------------------------
................................................................................................GTGGGGGTGGAGTGGCCTT.......................................................................................................................................1920.500.50--------------------------------------------0.50
.......................................................................TGAGGAGGCTGCATGTTTTCT..............................................................................................................................................................2130.330.33--0.33------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTT.................................................................................................................................................................1830.330.330.33--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTTGG...............................................................................................................................................................2030.330.330.33--------------------------------------------
.......................................................................TGAGGAGGCTGCATGTTTATT..............................................................................................................................................................2130.330.33--------0.33------------------------------------
.......................................................................TGAGGAGGCTGCATGTT..................................................................................................................................................................1730.330.33-0.33-------------------------------------------

Antisense strand
GGCTCCTGCACGACCTGGGGAAGGTCCTGGCCCTGTTCGGGGAGCCCCAGGTAAGAGTTGGAAGTGGAGGGTGAGGAGGCTGCATGTTGAGGCAAGGTGGGGGTGGAGTGGCCTTGGTGCTTGGCCTGGGATACTACCTGGGGGACAGGCCAGTGCACCCCCCACGGCCCCCCGACGGCTGCCTGTCCCTCTGGTGGCCTCGGTGCTTGGCCTGGGATACTACCTGGGGGACAGGCCAGTGCACCCCCCA
..............................................................................(((.((...)).)))...((.((((.((.((((....(((((((((((((.....((....))....)))))))).)))))..))))..)))))).))..........................................................................
..................................................................67.............................................................................................................178......................................................................
SizePerfect hitTotal NormPerfect NormTAX577580(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577590(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040024(GSM532909)
G613N. (cervix)		TAX577740(Rovira)
total RNA. (breast)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532876(GSM532876)
G547T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		TAX577579(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR040040(GSM532925)
G612N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		SRR040029(GSM532914)
G026T. (cervix)		SRR040037(GSM532922)
G243T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		SRR040028(GSM532913)
G026N. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		GSM532874(GSM532874)
G699T. (cervix)		SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040035(GSM532920)
G001T. (cervix)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...........................................................................................................................................................................................................................................CCAGTGCACCCCCCAAA 172.000.00-------------------2.00-------------------------
............................................................................................................................................................ACCCCCCACGGCCCCCCTG........................................................................... 191.000.00------------------------------1.00--------------
................................................AGGTAAGAGTTGGAACATT....................................................................................................................................................................................... 191.000.00------------------------------------1.00--------
.............................................................................................................................................................CCCCCCACGGCCCCCCGG........................................................................... 181.000.00--------------1.00------------------------------
..............................................................................................................TCCCAGGCCAAGCACCAAGGC....................................................................................................................... 2111.001.00-------------------------1.00-------------------
...........................................................................................................................................................CACCCCCCACGGCCCCCTGGG.......................................................................... 211.000.00-----------------------------1.00---------------
..............................................................................................................CCCAGGCCAAGCACCAAGGC........................................................................................................................ 2011.001.00------------------------------------------1.00--
.............................................................................................................................................................CCCCCCACGGCCCCCCGGGG......................................................................... 201.000.00--------------1.00------------------------------
..........................................................TGGAAGTGGAGGGTGTCTG............................................................................................................................................................................. 191.000.00--------------------------1.00------------------
..............................................................................................................................................................CCCCCACGGCCCCCCCG........................................................................... 171.000.00--------------1.00------------------------------
.............................................................................................................................................................CCCCCCACGGCCCCCCGGCG......................................................................... 201.000.00-----------------------------------1.00---------
.................................................................................................................................................................CCACGGCCCCCCGACCGTG...................................................................... 191.000.00--------------------1.00------------------------
................................................................................................................................................................CCCACGGCCCCCCGACCTG....................................................................... 191.000.00-----------------------------------------1.00---
....................................................................................................................................................................................CACCAGAGGGACAGGC...................................................... 1660.170.17-------------------------0.17-------------------