ID: uc003bky.1_intron_7_0_chr22_50857892_f.3p
GENE: (8)
chr22:50860483-50860732+


(2)
AGO2.ip 		(5)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(11)
CELL-LINE 		(4)
CERVIX 		(1)
FIBROBLAST 		(1)
HELA 		(5)
LIVER 		(1)
OTHER 		(7)
SKIN

Sense strand
AAGGTCTTTAGTACCTTTCTCTTCTGCCTGTACCAGTCACCAGATCACGTGTGGAGACGCTGGGTAGCTGCACTGCTCTAGGGTTTCTTTTTGGGAAAGTTAAAAGGGCTCTTTCTGGAAGAAGCGGGTGCACTGAGTTGCTGGTGAGGTTGGACAGGGTCCTGGTGTCCCCGGTCTCCATCTGCTTTCCTCATCCACAGGACAGAGGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCATACG
...................................................................................................................((((.((((((((((....(((..(((((.((..((((((...)))).))..)).)))))))))))))))))).....)))).....................................................
...................................................................................................................116.................................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577743(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR343334SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................GAAGCGGGTGCACTGATTTT..............................................................................................................2022.000.002.006.003.00-----3.001.00---2.00----------1.00-1.00-1.00----------1.001.00----
........................................................................................................................GAAGCGGGTGCACTGATTT...............................................................................................................1913.000.003.001.002.00------2.00----------1.00--------1.00----1.001.00------1.00--
.................................................................................................AGTTAAAAGGGCTCTTTCTGGAAGAAGCGGGTGCA......................................................................................................................3513.003.00-------3.00-------------------------------------
........................................................................................................................GAAGCGGGTGCACTGATTTG..............................................................................................................203.000.00-1.001.00-----------1.00------------------------------
...............................................................................................................................................................................................................................TTTCTCAGGGACTGGAAAGG.......2012.002.00-----2.00---------------------------------------
......................................................................................................AAAGGGCTCTTTCTGGAAGAAGCGGGCGC.......................................................................................................................292.000.00------------2.00--------------------------------
.....................................................................................................AAAAGGGCTCTTTCTGGAAGA................................................................................................................................2111.001.00---1.00-----------------------------------------
.....................................................................................................................................................................................................CAGGACAGAGGGCTTGGTGGACTCCTTCTCT......................311.000.00----1.00----------------------------------------
........................................CAGATCACGTGTGGAGACGCT.............................................................................................................................................................................................2111.001.00----------1.00----------------------------------
.........AGTACCTTTCTCTTCCT................................................................................................................................................................................................................................171.000.00----1.00----------------------------------------
........................................................................................................................GAAGCGGGTGCACTGATG................................................................................................................181.000.00-------------------------------------1.00-------
..........................................................................................................................................TGCTGGTGAGGTTGGACAGGGT..........................................................................................2211.001.00-----------1.00---------------------------------
...........................................................................................................................................................................................................AGAGGGCTTGGTGGACTCCT...........................2011.001.00---------------------------1.00-----------------
.............................................................................................................................................................................................................AGGGCTTGGTGGACTCCTTTTCTCAGGGACCGG............331.000.00----1.00----------------------------------------
..............................................................................................................................................................................TCTCCATCTGCTTTCCTCATCCACT...................................................251.000.00------1.00--------------------------------------
..............................................................................TAGGGTTTCTTTTTGGGATATT......................................................................................................................................................221.000.00------------------1.00--------------------------
........................................................................................................................GAAGCGGGTGCACTGTTTT...............................................................................................................191.000.00--------------1.00------------------------------
............................................................................................................................................................................................................................CCTTTTCTCAGGGACTGGAAA.........2111.001.00---1.00-----------------------------------------
..............................................................................................................................................................................TCTCCATCTGCTTTCCTCATCCA.....................................................2311.001.00------1.00--------------------------------------
.............................................................................................................TCTTTCTGGAAGAAGCGGGTGC.......................................................................................................................2211.001.00-------------------------------------------1.00-
........................................................................................................................GAAGCGGGTGCACTGAATTG..............................................................................................................201.000.00--1.00------------------------------------------
........................................................................................................................GAAGCGGGTGCACTGACAT...............................................................................................................191.000.00--1.00------------------------------------------
........................................................................................................................GAAGCGGGTGCACTGAATA...............................................................................................................191.000.001.00--------------------------------------------
........................................................................................................................GAAGCGGGTGCACTGAATC...............................................................................................................191.000.001.00--------------------------------------------
................................................................................................................................................................................................................................TTCTCAGGGACTGGAAAGG.......1911.001.00-------------------1.00-------------------------
........................................................................................................................GAAGCGGGTGCACTGATTC...............................................................................................................191.000.00-------------------------1.00-------------------
................................................................................................................................................TGAGGTTGGACAGGGTTTAG......................................................................................201.000.00---------------------------------1.00-----------
..........................................................................................................................................TGCTGGTGAGGTTGGACAGA............................................................................................201.000.00-----------1.00---------------------------------
........................................................................................................................GAAGCGGGTGCACTGAA.................................................................................................................171.000.001.00--------------------------------------------
.............................................................................................................................................................................................................................CTTTTCTCAGGGACTGGAAAGG.......2211.001.00------------------------------1.00--------------
..................................................................................................................CTGGAAGAAGCGGGTGCACT....................................................................................................................2011.001.00-------------------------------1.00-------------
..............................................................................................................................................................................TCTCCATCTGCTTTCCTCATCC......................................................2211.001.00---------------1.00-----------------------------
..........................................................................................................................................................................................TTCCTCATCCACAGGACAGAGGGCTTGGTG..................................3011.001.00----------------------1.00----------------------
................................................................................................................TTCTGGAAGAAGCGGGTGC.......................................................................................................................1911.001.00---------------------1.00-----------------------
.................................................................................................................................................................................................................................TCTCAGGGACTGGAAAGGT......1911.001.00------------------------------------1.00--------
.................................................TGTGGAGACGCTGGGTAGCTGCAC.................................................................................................................................................................................2411.001.00---1.00-----------------------------------------
........................................................................................................................GAAGCGGGTGCACTGATCTG..............................................................................................................201.000.00-----------------------------------------1.00---
.......................................................................................................................................AGTTGCTGGTGAGGTTGGACAGGGTCCTGGCG...................................................................................321.000.00----1.00----------------------------------------
........................................................................................................................................................................................................GACAGAGGGCTTGGTGGACTCCT...........................2311.001.00-----1.00---------------------------------------
...........................................ATCACGTGTGGAGACGCTG............................................................................................................................................................................................1911.001.00-----1.00---------------------------------------
.....................................................................................................................................................................................................................GTGGACTCCTTTTCTCAGGGACT..............2311.001.00------1.00--------------------------------------
..........................................................................................................................................................................................................CAGAGGGCTTGGTGGACTC.............................1911.001.00-----------------------1.00---------------------
........................................................................................................................GAAGCGGGTGCACTGCTTT...............................................................................................................191.000.001.00--------------------------------------------
.................................................................................................................................................................................................................................TCTCAGGGACTGGAAAGGTCATACG2511.001.00--------------------------------1.00------------
........................................................................................................................GAAGCGGGTGCACTGGATT...............................................................................................................191.000.00--------------------------------------1.00------
..........................................................................................................................................TGCTGGTGAGGTTGGACAGGGTCCGGTG....................................................................................281.000.00----1.00----------------------------------------
..................................................................................................................................................................................................CCACAGGACAGAGGGC........................................1680.250.25-----------0.12--------------------------------0.12

Antisense strand
AAGGTCTTTAGTACCTTTCTCTTCTGCCTGTACCAGTCACCAGATCACGTGTGGAGACGCTGGGTAGCTGCACTGCTCTAGGGTTTCTTTTTGGGAAAGTTAAAAGGGCTCTTTCTGGAAGAAGCGGGTGCACTGAGTTGCTGGTGAGGTTGGACAGGGTCCTGGTGTCCCCGGTCTCCATCTGCTTTCCTCATCCACAGGACAGAGGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCATACG
...................................................................................................................((((.((((((((((....(((..(((((.((..((((((...)))).))..)).)))))))))))))))))).....)))).....................................................
...................................................................................................................116.................................................................................200................................................
SizePerfect hitTotal NormPerfect NormTAX577743(Rovira)
total RNA. (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189782RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR343334SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR038858(GSM458541)
MEL202. (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		TAX577741(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR040014(GSM532899)
G623N. (cervix)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................................CTGGTGTCCCCGGTCATTA...................................................................... 195.000.00---3.00------2.00----------------------------------
.....................................................................................................................................................................................CTGCTTTCCTCATCCACAGGAT............................................... 221.000.00------1.00--------------------------------------
.................................................................................................................................................................CTGGTGTCCCCGGTCATT....................................................................... 181.000.00-----------------1.00---------------------------
..........................................................................................TTGGGAAAGTTAAAAGGG.............................................................................................................................................. 181.000.00----------------1.00----------------------------