ID: uc003bbl.2_intron_1_0_chr22_42322336_r
GENE: TNFRSF13C(1)
chr22:42322286-42322691-


(2)
AGO2.ip
(6)
B-CELL
(1)
BRAIN
(9)
BREAST
(21)
CELL-LINE
(6)
CERVIX
(1)
HEART
(3)
LIVER
(3)
OTHER
(36)
SKIN
(1)
XRN.ip

Sense strand
CCGCCACTGCGTGGCCTGCGGGCTCCTGCGCACGCCGCGGCCGAAACCGGGTAAGGGGGACCCACGGGGCGCGCGGCGCCGGCAGCTGCGGGGAGAACGGGGCCCCGATCGCCAGGGCGCAGGCAGAGCCCCGACCCCCGGGGGCGCCGAGGGCTGAAAGGACCCTGTGGGCAGGGCCTGGAGGGGCCCGCGATCACCGCGTGGCCCTCACCGCCGCCTCTCTCCCTCCCCTTGTCCACCGCCCCCCGGCTGTCCCTCCCCTCCCCGGCCAGCCTCGCCCCCCTCCGCCCCTCCCCGTCCCCGCTCCTCCCTCCCCTCGGCCCCCTGGCCTCCCTCCCTGTCCCCTCCCGAAGCAGCCGGGGCCAGCAGCCCTGCGCCCAGGACGGCGCTGCAGCCGCAGGAGTCG
................................................................((((((..((.((((((((.....(((((.........)))))...)))..)))))..))...))))))..((((((.....))).))).............................................................................................................................................................................................................................................................
..............................................................63............................................................................................157.......................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189785SRR029128(GSM416757)
H520. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189786SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
GSM956925PAZD5SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR189783SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
......................................................................................................................................CCCCCGGGGGCGCCGCGGC.............................................................................................................................................................................................................................................................196.000.00--2.00---1.00--------1.00----------------------1.00--------1.00-------------------------------------------
...................................................................GGCGCGCGGCGCCGGCGG.................................................................................................................................................................................................................................................................................................................................1824.001.00--1.00--1.00-----1.001.00------------------------------------------------------------------------------
...................................................................GGCGCGCGGCGCCGGCGGC................................................................................................................................................................................................................................................................................................................................1923.001.00------------1.00--1.00-----------------------------------1.00---------------------------------------
.....................................................................................................................................................................................................................................................................................................CCCGTCCCCGCTCCTTGCC..............................................................................................193.000.00--------------------1.00---------------------------------------1.00-----------1.00------------------
......................................................................................................................................CCCCCGGGGGCGCCGCGAC.............................................................................................................................................................................................................................................................193.000.00-----1.00--------1.00---------------------1.00------------------------------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGGCGG.............................................................................................................................................................................................................................................................192.000.00------1.00----1.00-------------------------------------------------------------------------------
......................................................................................................................................................................GTGGGCAGGGCCTGGAGGGG............................................................................................................................................................................................................................2012.002.00-------------------------------------------------------------1.00-----1.00-----------------------
.....................................................................................................................................................................................................................................................................................CCCCCCTCCGCCCCTCC................................................................................................................1712.002.00----------------------------------1.00---------------------------------1.00----------------------
.......................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGACGGCGCTGCA.............1812.002.00---2.00---------------------------------------------------------------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGGCG..............................................................................................................................................................................................................................................................182.000.00--1.00-------------------------------------------------1.00--------------------------------------
...................................................................GGCGCGCGGCGCCGGCGGCG...............................................................................................................................................................................................................................................................................................................................2022.001.00----1.00----------------1.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................................CCCCGGCTGTCCCTCTTA.................................................................................................................................................182.000.00-------------------------------1.00---------------------------------------1.00-------------------
................................................................................................................................................................................................................................................................................................................................................................................GCCCTGCGCCCAGGACGCG...................192.000.002.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................TGGGCAGGGCCTGGAGGGAAA..........................................................................................................................................................................................................................212.000.00------------------------2.00------------------------------------------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGCCGC.............................................................................................................................................................................................................................................................192.000.00----------------------------1.00----------------------------1.00---------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGCGGA.............................................................................................................................................................................................................................................................192.000.00--2.00----------------------------------------------------------------------------------------
.......................................GCCGAAACCGGGTAAGGGGGACCC.......................................................................................................................................................................................................................................................................................................................................................2411.001.00--------------------------------------------------------1.00----------------------------------
............................CGCACGCCGCGGCCGGCAG.......................................................................................................................................................................................................................................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------
................................................................................................................................CCCCGACCCCCGGGGGA.....................................................................................................................................................................................................................................................................1721.000.50-1.00-----------------------------------------------------------------------------------------
...................................................................GGCGCGCGGCGCCGGC...................................................................................................................................................................................................................................................................................................................................1621.001.00-----------------1.00-------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CCGTCCCCGCTCCTCCCTCCGGGG........................................................................................241.000.00------------------1.00------------------------------------------------------------------------
...................................................................GGCGCGCGGCGCCGGCG..................................................................................................................................................................................................................................................................................................................................1721.001.00---------------------------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................................................TCCACCGCCCCCCGGCC...........................................................................................................................................................171.000.00----1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................................CCCTCACCGCCGCCTCTCTCCCTCCCCT..............................................................................................................................................................................2811.001.00--------------------------1.00----------------------------------------------------------------
................................................................................................................................................CGCCGAGGGCTGAAAGGAC...................................................................................................................................................................................................................................................1911.001.00-----------------------------------1.00-------------------------------------------------------
...........................GCGCACGCCGCGGCCGGACG.......................................................................................................................................................................................................................................................................................................................................................................201.000.00----1.00--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................CCCCTCCGCCCCTCCCCTCTC..........................................................................................................211.000.00---------------------------------------1.00---------------------------------------------------
...............................................................................................................................GCCCCGACCCCCGGGGGG.....................................................................................................................................................................................................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGCG...............................................................................................................................................................................................................................................................171.000.00-----1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................CCCCCCTCCGCCCCTCCC...............................................................................................................1811.001.00---------------------------------------------1.00---------------------------------------------
...............................................................ACGGGGCGCGCGGCGCCG.....................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................CTGAAAGGACCCTGTGGGCAG........................................................................................................................................................................................................................................2111.001.00-------------1.00-----------------------------------------------------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGCGGT.............................................................................................................................................................................................................................................................191.000.00-------------------------------------------1.00-----------------------------------------------
.......................................................................................GCGGGGAGAACGGGGCCA.............................................................................................................................................................................................................................................................................................................181.000.00-----------------------1.00-------------------------------------------------------------------
................................................................................GGCAGCTGCGGGGAGAACGG..................................................................................................................................................................................................................................................................................................................2011.001.00-------------------------1.00-----------------------------------------------------------------
...................................................................GGCGCGCGGCGCCGGCGAC................................................................................................................................................................................................................................................................................................................................1921.001.00--------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................................................................................................CTCCGCCCCTCCCCGTCCTCC.......................................................................................................211.000.00----------------------------------------------------------------1.00--------------------------
...................................................................GGCGCGCGGCGCCGGCGCA................................................................................................................................................................................................................................................................................................................................1921.001.00-1.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................CCACCGCCCCCCGGCGGCG........................................................................................................................................................191.000.00-1.00-----------------------------------------------------------------------------------------
......................................................................................................CCCCGATCGCCAGGGCGC..............................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------------------1.00----------------------------------------
............................................................................CGCCGGCAGCTGCGGGGAGAA.....................................................................................................................................................................................................................................................................................................................2111.001.00----------------------------------------------1.00--------------------------------------------
..........................................................................................................................................................................................................................................................................................................CCCCGCTCCTCCCTCGGGA.........................................................................................191.000.00-----------------------------------------------------1.00-------------------------------------
...................................................................GGCGCGCGGCGCCGGCGCC................................................................................................................................................................................................................................................................................................................................1921.001.00------------------------------------------1.00------------------------------------------------
....................................................................................................................................................................CTGTGGGCAGGGCCTGGAGGG.............................................................................................................................................................................................................................2111.001.00-------------1.00-----------------------------------------------------------------------------
.................................................................................GCAGCTGCGGGGAGAACGGG.................................................................................................................................................................................................................................................................................................................2011.001.00---1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CGCTCCTCCCTCCCCACC.......................................................................................181.000.00-----------------------------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................................................................................................................CGCTCCTCCCTCCCCAC........................................................................................171.000.00-----------------------------1.00-------------------------------------------------------------
.......................................................................................................CCCGATCGCCAGGGCGTCGG...........................................................................................................................................................................................................................................................................................201.000.00---------------------1.00---------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................CGCTCCTCCCTCCCCCCTC......................................................................................191.000.00----------------1.00--------------------------------------------------------------------------
......................................................................................................................................CCCCCGGGGGCGCCGGGCC.............................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------1.00--------------------------------
...................................................................GGCGCGCGGCGCCGGCTGT................................................................................................................................................................................................................................................................................................................................1921.001.00----1.00--------------------------------------------------------------------------------------
.................................................................GGGGCGCGCGGCGCC......................................................................................................................................................................................................................................................................................................................................1541.001.00--------------------1.00----------------------------------------------------------------------
................................................................................................................................CCCCGACCCCCGGGGG......................................................................................................................................................................................................................................................................1620.500.50-0.50-----------------------------------------------------------------------------------------
..........................................................................................................................................................TGAAAGGACCCTGTG.............................................................................................................................................................................................................................................1540.250.25---------------------------------------------------------------------------------0.25---------
...................................................................GGCGCGCGGCGCCGG....................................................................................................................................................................................................................................................................................................................................1550.200.20---------------------------------0.20---------------------------------------------------------
...................................................................GGCGCGCGGCGCCGGTCGC................................................................................................................................................................................................................................................................................................................................1950.200.20--------------------------------0.20----------------------------------------------------------
..............................................................................................................................................................................................................................................CCGCCCCCCGGCTGT.........................................................................................................................................................1550.200.20------0.20------------------------------------------------------------------------------------
...................................................................GGCGCGCGGCGCCGGGC..................................................................................................................................................................................................................................................................................................................................1750.200.20---------0.20---------------------------------------------------------------------------------
..........................................................................................................................................CGGGGGCGCCGAGGG.............................................................................................................................................................................................................................................................1580.120.12------------------------------------------------------------------------------------------0.12

Antisense strand
CCGCCACTGCGTGGCCTGCGGGCTCCTGCGCACGCCGCGGCCGAAACCGGGTAAGGGGGACCCACGGGGCGCGCGGCGCCGGCAGCTGCGGGGAGAACGGGGCCCCGATCGCCAGGGCGCAGGCAGAGCCCCGACCCCCGGGGGCGCCGAGGGCTGAAAGGACCCTGTGGGCAGGGCCTGGAGGGGCCCGCGATCACCGCGTGGCCCTCACCGCCGCCTCTCTCCCTCCCCTTGTCCACCGCCCCCCGGCTGTCCCTCCCCTCCCCGGCCAGCCTCGCCCCCCTCCGCCCCTCCCCGTCCCCGCTCCTCCCTCCCCTCGGCCCCCTGGCCTCCCTCCCTGTCCCCTCCCGAAGCAGCCGGGGCCAGCAGCCCTGCGCCCAGGACGGCGCTGCAGCCGCAGGAGTCG
................................................................((((((..((.((((((((.....(((((.........)))))...)))..)))))..))...))))))..((((((.....))).))).............................................................................................................................................................................................................................................................
..............................................................63............................................................................................157.......................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
TAX577741(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189785SRR029128(GSM416757)
H520. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189786SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
GSM956925PAZD5SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040013(GSM532898)
G648T. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR040032(GSM532917)
G603N. (cervix)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR189783SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCAT.................................................................................................................................................. 184.000.000.75------0.25--------------1.50--------------------------------------------------0.75--0.25---------0.250.25---
..........................................................................................................................................................................................................GGCCCTCACCGCCGCCGCG......................................................................................................................................................................................... 193.000.00-1.00--------2.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................GCGGTGATCGCGGGCCCCT.............................................................................................................................................................................................................. 1912.002.00---2.00---------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................CCTGGCCTCCCTCCCTAACG............................................................... 202.000.002.00------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................ACTCCTGCGGCTGCAGCGCCG.. 2112.002.00-------------------2.00-----------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCCA.................................................................................................................................................. 181.330.00-------------------------0.33-0.33--------------------------------------------------0.33-0.33----------
..................................................................................................................................................................................................................................................AGGGACAGCCGGGGG..................................................................................................................................................... 1541.001.00--------0.25-------------------0.250.25------------------------------------------------------0.25------
..........................................................................................................................................................................................................................................................................................................................................GGGGACAGGGAGGGA............................................................. 1501.001.00--------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................CCCCCCTCCGCCCCTTTTA.............................................................................................................. 191.000.00-------------------------------------------------------1.00-----------------------------------
............................................................................................................................................................................................................................................................................CCAGCCTCGCCCCCCTGC........................................................................................................................ 181.000.00--------------------------------------------1.00----------------------------------------------
.....................................................................................................................................................................................................................................................................................CCCCCCTCCGCCCCTTTT............................................................................................................... 181.000.00-----------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCC................................................................................................................................................... 171.000.00----0.33-0.33-------------------------------------------------------------------0.33----------------
.....................................................................................................................................................................................................................................................................................CCCCCCTCCGCCCCTCAG............................................................................................................... 181.000.00----------------------------------------------------------------------1.00--------------------
..................................................................................................................................................................................................................CCGCCGCCTCTCTCCCG................................................................................................................................................................................... 171.000.00---------1.00---------------------------------------------------------------------------------
.................................................................................................................................CCCGACCCCCGGGGGCGCTC................................................................................................................................................................................................................................................................. 201.000.00------------------1.00------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CCTCCGCCCCTCCCCGCT........................................................................................................... 181.000.00-1.00-----------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................CCTCCCGAAGCAGCCAGC............................................. 181.000.00------------------------------------------------------------------1.00------------------------
.................................................................................................................................................................................................................................................CCCCCCGGCTGTCCCAT.................................................................................................................................................... 171.000.001.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................CCTCGCCCCCCTCCGGTCG................................................................................................................... 191.000.00----------------1.00--------------------------------------------------------------------------
..............................................................................................................................AGCCCCGACCCCCGGGG....................................................................................................................................................................................................................................................................... 171.000.00-----------------------------------------------------------------1.00-------------------------
..................................................................................................................................................................................................................................................................................TCGCCCCCCTCCGCCCCTCCA............................................................................................................... 211.000.00-------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................CCTGGGCGCAGGGCTGCTGG........................ 2011.001.00------------------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................................................GGGAGGGAGAGAGGC................................................................................................................................................................................ 1501.001.00--------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................CCTCCCCTCCCCGGCCAAATA................................................................................................................................... 211.000.001.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGACGGCGCTGCATTTG......... 2211.000.00-------1.00-----------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCATT................................................................................................................................................. 191.000.00-------------------------0.25----0.25-------------------------------------------0.25----------0.25-----
.................................................................................................................................................................................................................................................................................CTCGCCCCCCTCCGCCTG................................................................................................................... 181.000.00--------------------------------------------------------------1.00----------------------------
......................................................................................................................................................................................................................................................................................................................................................................GGGGCCAGCAGCCCTCCC.............................. 181.000.001.00------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................CCTCCGCCCCTCCCCGTAAAC........................................................................................................ 211.000.001.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................GCCGGGGAGGGGAGGG......................................................................................................................................... 1601.001.00------------------------------------------------1.00------------------------------------------
...........................................................................................................................................................................................................GCCCTCACCGCCGCCTTTG........................................................................................................................................................................................ 191.000.00--------------1.00----------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................GCCAGCAGCCCTGCGGTA........................... 181.000.00---------------------------1.00---------------------------------------------------------------
...............................................................................................................................GCCCCGACCCCCGGGGGGC.................................................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------1.00------------------------------------
................................................................................................................................CCCCGACCCCCGGGGGGGC................................................................................................................................................................................................................................................................... 1921.000.00---------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................AGGGCTGCTGGCCCCGGC................................. 1811.001.00---------------------------------------------------------------------1.00---------------------
.............................................................................................................................................................................................................................................ACCGCCCCCCGGCTGCGC....................................................................................................................................................... 181.000.00-------------------------------------1.00-----------------------------------------------------
............................................................CGCGCGCCCCGTGGG........................................................................................................................................................................................................................................................................................................................................... 1511.001.00-----------------------------------------1.00-------------------------------------------------
........................................................................................CGGGGAGAACGGGGCGCTT........................................................................................................................................................................................................................................................................................................... 191.000.00----------------------------------------1.00--------------------------------------------------
............................................................................................................................................................................................................................................................................................................CCGCTCCTCCCTCCCCAGTT...................................................................................... 201.000.00-------------------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCA................................................................................................................................................... 170.750.00-0.25-------------------------------------------------------------------------0.25-------0.25-------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTC.................................................................................................................................................... 160.750.00-0.25-------------------------------------------------------------------------0.25------0.25--------
.............................................................................................................................................................................................................................................................................................CGGGGACGGGGAGGGGCG....................................................................................................... 1820.500.50-------0.50-----------------------------------------------------------------------------------
................................................................GGCGCCGCGCGCCCCG...................................................................................................................................................................................................................................................................................................................................... 1620.500.50--------------------------0.50----------------------------------------------------------------
..................................................................................................................................................................................................................................................GAGGGACAGCCGGGGG.................................................................................................................................................... 1630.330.33-------------------------------------------------------------------------------0.33-----------
..................................................................................................................................GCCCCCGGGGGTCGG..................................................................................................................................................................................................................................................................... 1530.330.33------0.33------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCCAT................................................................................................................................................. 190.330.00-----------------------------------------------------------------------------0.33-------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTTAT.................................................................................................................................................. 180.250.00----------------------0.25--------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCAG.................................................................................................................................................. 180.250.00----------------------0.25--------------------------------------------------------------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCTT.................................................................................................................................................. 180.250.00----------------------------------------------------------------------------0.25--------------
..................................................................................................................................................................................................................................................CCCCCGGCTGTCCCTCAC.................................................................................................................................................. 180.250.000.25------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GAGGGAGAGAGGCGGC.................................................................................................................................................................................. 1650.200.20----------------------------------------------------------------------------------------0.20--
.......................................................................................................................................................................................................................AGGGGAGGGAGAGAGGC.............................................................................................................................................................................. 1750.200.20-------------------------------0.20-----------------------------------------------------------
...................................................................................................................................................................................................................................................GAGGGACAGCCGGGG.................................................................................................................................................... 1570.140.14-----------------------------------------------------------------------------------------0.14-
................................................................................................................................CCCCGGGGGTCGGGG....................................................................................................................................................................................................................................................................... 1580.120.12----------0.12--------------------------------------------------------------------------------
................................................................................................................................CCCCGACCCCCGGGGGG..................................................................................................................................................................................................................................................................... 170.120.00----------------------------------0.12--------------------------------------------------------