ID: uc003bak.1_intron_0_0_chr22_41957188_f.3p
GENE: CSDC2(1)
chr22:41967647-41967896+


(1)
BREAST
(3)
CELL-LINE
(1)
CERVIX
(8)
HEART
(2)
LIVER
(1)
OTHER
(15)
SKIN

Sense strand
TGCAAACTGGAAGGACTTAGGGGTCATATGACCCCTAGTTTTGTTTTTCTGGTGAGGACTCTGAACCACGATGGGGTCGTTTGTGACTTGAAGTAACGCCGTGAGGATAGCAGGTGGGACCAGCCCTCCTCACTGTGGCCAGGGTTCAGGAGCTGCTCCCCTGGACTAGGCTCACCTGTGCCTCTTTCTTCCTCTTCCAGACGGAGCCCGTGGCTGGTGAGGCCGCAGAGCAGGGCCAGGCCGGGCCCTG
..................................................((((...(((..((..(((((.........)))))..))..)))..))))......................................................................................................................................................
..................................................51................................................101...................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
..................................................GGTGAGGACTCTGAACTCTG....................................................................................................................................................................................2036.000.0010.005.003.002.002.002.003.001.002.00--2.00--------1.001.00---1.001.00----
...................................................GTGAGGACTCTGAACTCTG....................................................................................................................................................................................1919.000.006.001.001.00-2.001.00-2.00-2.001.00---1.00-------1.00-1.00------
.................................................TGGTGAGGACTCTGAACTCTG....................................................................................................................................................................................217.000.001.002.002.002.00---------------------------
............................................................................................................................................................................................................AGCCCGTGGCTGGTGTGAG...........................191.000.00-------------1.00-----------------
..................................................GGTGAGGACTCTGAACTCGG....................................................................................................................................................................................201.000.001.00------------------------------
...............................................TCTGGTGAGGACTCTGAACTCTG....................................................................................................................................................................................231.000.00----------1.00--------------------
.GCAAACTGGAAGGACTTAGGGGT..................................................................................................................................................................................................................................2311.001.00------------1.00------------------
..................................................GGTGAGGACTCTGAAGGC......................................................................................................................................................................................181.000.00----------------1.00--------------
................................................CTGGTGAGGACTCTGAACTCTG....................................................................................................................................................................................221.000.00---------------1.00---------------
...............................................................................TTTGTGACTTGAAGTACC.........................................................................................................................................................181.000.00-----------------------1.00-------
...........................................TTTTTCTGGTGAGGACTCTGAACCCTG....................................................................................................................................................................................271.000.00-----------------1.00-------------
.....ACTGGAAGGACTTAGG.....................................................................................................................................................................................................................................1640.750.75-----0.25----------------------0.50--
.....................................................................................................................................................................................................CAGACGGAGCCCGTGGC....................................1720.500.50-----------------------------0.50-
..............................................................................GTTTGTGACTTGAAG.............................................................................................................................................................1580.120.12------------------------------0.12

Antisense strand
TGCAAACTGGAAGGACTTAGGGGTCATATGACCCCTAGTTTTGTTTTTCTGGTGAGGACTCTGAACCACGATGGGGTCGTTTGTGACTTGAAGTAACGCCGTGAGGATAGCAGGTGGGACCAGCCCTCCTCACTGTGGCCAGGGTTCAGGAGCTGCTCCCCTGGACTAGGCTCACCTGTGCCTCTTTCTTCCTCTTCCAGACGGAGCCCGTGGCTGGTGAGGCCGCAGAGCAGGGCCAGGCCGGGCCCTG
..................................................((((...(((..((..(((((.........)))))..))..)))..))))......................................................................................................................................................
..................................................51................................................101...................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040025(GSM532910)
G613T. (cervix)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.....................................................................................................................................................................................CTCTTTCTTCCTCTTCCTGA................................................. 201.000.00---------------------------1.00---
.......................................................................................................................CCAGCCCTCCTCACTGCGCC............................................................................................................... 201.000.00------------------1.00------------
........................................................................................................GGATAGCAGGTGGGACAGT............................................................................................................................... 191.000.00-------------------1.00-----------