ID: uc003azw.2_intron_10_0_chr22_41737151_f.3p
GENE: (11)
chr22:41738333-41738582+


(1)
AGO2.ip 		(3)
B-CELL 		(1)
BRAIN 		(15)
BREAST 		(17)
CELL-LINE 		(20)
CERVIX 		(5)
HEART 		(4)
LIVER 		(3)
OTHER 		(6)
SKIN

Sense strand
TATTTTAGACTCTTGGACCACATTACAAAGAACTCCCCTGGCTGGGAGGGTGGAGGAAGAGGAAGGGTCCTGGGCTGTGGTTTTGCTCTTGGGTAGGATAGGGGGGTCATAGAGCACTCCCCACTTCTGGTGCCCTGGCTGGCCCCAGTGGCCTCAGCCATCATCCAGTGCCCACAATGGCCTCCTTCCTCCTGTCACAGCCAGAGCCCTGCATGCCCAACACTGCCTTGCTCATCAAGAACCCCTTGGC
............................................................................((((((..(((...((((((((..(((((((........)))))))...)))..))))).))).((((.....))))..)))))).........................................................................................
..........................................................................75.......................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR040008(GSM532893)
G727N. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040025(GSM532910)
G613T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040040(GSM532925)
G612N. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040011(GSM532896)
G529T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR343334SRR040037(GSM532922)
G243T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577740(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189784SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040041(GSM532926)
G612T. (cervix)		SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		GSM532873(GSM532873)
G699N. (cervix)		SRR343335SRR040012(GSM532897)
G648N. (cervix)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR040027(GSM532912)
G220T. (cervix)		SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................................................................................GCCCCAGTGGCCTCATGGA..........................................................................................19113.000.006.007.008.0010.007.007.007.005.002.003.003.003.003.001.002.002.00-1.002.002.001.001.001.001.001.002.001.001.00--1.001.00--1.00-1.001.001.00--1.001.00-1.00--1.00-1.00---1.00-1.001.00-1.00-----1.00-1.00-1.00--1.00-1.001.001.001.00-
.............................................................................................................................................GCCCCAGTGGCCTCATGG...........................................................................................1858.000.0038.003.00-1.00-----2.002.001.00-1.001.002.00----1.00---1.00-----1.001.00-------1.00------1.00-------------------------1.00-----
.............................................................................................................................................GCCCCAGTGGCCTCATGGC..........................................................................................1914.000.00-2.002.00--1.001.002.003.00---------1.00----------------1.00----------------------------------1.00-------
..............................................................................................................................................................CATCATCCAGTGCCCAGGG.........................................................................194.000.00----------------3.00----------------------------------------1.00--------------------
.............................................................................................................................................GCCCCAGTGGCCTCATGGG..........................................................................................193.000.00-------1.00----1.00-------------1.00---------------------------------------------------
.............................................................................................................................................GCCCCAGTGGCCTCATGCA..........................................................................................193.000.00----1.00------------1.00-1.00----------------------------------------------------------
.............................................................................................................................................GCCCCAGTGGCCTCATGGT..........................................................................................193.000.00--1.00-1.00------------1.00------------------------------------------------------------
.............................................................................................................................................GCCCCAGTGGCCTCATTGA..........................................................................................192.000.00---------------------------1.00----------------------------------1.00---------------
.............................................................................................................................................GCCCCAGTGGCCTCACGGA..........................................................................................192.000.00--------1.00----1.00----------------------------------------------------------------
.............................................................................................................................................GCCCCAGTGGCCTCATGTT..........................................................................................191.000.00---------------------------------------------------------------1.00--------------
........................................................................................................................................................................................................CCAGAGCCCTGCATGCCCAACA............................2211.001.00---------------------------------------------------------------------1.00--------
.....................................................................................................................................................................................................................................GCTCATCAAGAACCCCTTGGC2111.001.00---------------------------------1.00--------------------------------------------
..TTTTAGACTCTTGGACCACATTAC................................................................................................................................................................................................................................2411.001.00----------------------------1.00-------------------------------------------------
....................................................................................................................................................................................................ACAGCCAGAGCCCTGCATGCCCAA..............................2411.001.00-----------------------1.00------------------------------------------------------
...........................................GGGAGGGTGGAGGAAGAAGGC..........................................................................................................................................................................................211.000.00--------------------------------1.00---------------------------------------------
.............................................................................................................................................GCCCCAGTGGCCTCACGG...........................................................................................181.000.001.00-----------------------------------------------------------------------------
...............................................................................GTTTTGCTCTTGGGTATG.........................................................................................................................................................181.000.00----------------------------------------1.00-------------------------------------
.......................................................................................CTTGGGTAGGATAGGTG..................................................................................................................................................171.000.00------------------------------------------------1.00-----------------------------
.............................................................................................................................................GCCCCAGTGGCCTCATGA...........................................................................................181.000.00--------------1.00---------------------------------------------------------------
.............................................................................................................................................GCCCCAGTGGCCTCATG............................................................................................171.000.00---------------------1.00--------------------------------------------------------
.......................................................................................................................................................................................................GCCAGAGCCCTGCATGCCCAAC.............................2211.001.00----------------------------------------------------1.00-------------------------
.........................................................................GCTGTGGTTTTGCTCTGG...............................................................................................................................................................181.000.00--1.00---------------------------------------------------------------------------
.......................................................................................CTTGGGTAGGATAGGTGG.................................................................................................................................................181.000.00-------------------------------------------------------------1.00----------------
..................................................TGGAGGAAGAGGAAGGGTTGAG..................................................................................................................................................................................221.000.00-------------------------------------------------------------------1.00----------
.........................CAAAGAACTCCCCTG..................................................................................................................................................................................................................1570.140.14--------------------------------0.14---------------------------------------------
...................................................................................................................................................................................................CACAGCCAGAGCCCTGC......................................1770.140.14---------------------0.14--------------------------------------------------------

Antisense strand
TATTTTAGACTCTTGGACCACATTACAAAGAACTCCCCTGGCTGGGAGGGTGGAGGAAGAGGAAGGGTCCTGGGCTGTGGTTTTGCTCTTGGGTAGGATAGGGGGGTCATAGAGCACTCCCCACTTCTGGTGCCCTGGCTGGCCCCAGTGGCCTCAGCCATCATCCAGTGCCCACAATGGCCTCCTTCCTCCTGTCACAGCCAGAGCCCTGCATGCCCAACACTGCCTTGCTCATCAAGAACCCCTTGGC
............................................................................((((((..(((...((((((((..(((((((........)))))))...)))..))))).))).((((.....))))..)))))).........................................................................................
..........................................................................75.......................................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR040008(GSM532893)
G727N. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040025(GSM532910)
G613T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR040040(GSM532925)
G612N. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR040031(GSM532916)
G013T. (cervix)		TAX577590(Rovira)
total RNA. (breast)		SRR040010(GSM532895)
G529N. (cervix)		TAX577588(Rovira)
total RNA. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR040011(GSM532896)
G529T. (cervix)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR343334SRR040037(GSM532922)
G243T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		GSM532890(GSM532890)
G576T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		TAX577580(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		TAX577740(Rovira)
total RNA. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189784SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR040041(GSM532926)
G612T. (cervix)		SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)		SRR037936(GSM510474)
293cand1. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR037935(GSM510473)
293cand3. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191492(GSM715602)
154genomic small RNA (size selected RNA from . (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		GSM532873(GSM532873)
G699N. (cervix)		SRR343335SRR040012(GSM532897)
G648N. (cervix)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR040027(GSM532912)
G220T. (cervix)		SRR191532(GSM715642)
135genomic small RNA (size selected RNA from . (breast)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................CCTGGGCTGTGGTTTGAA.................................................................................................................................................................... 183.000.00-----1.00----------------1.00----------------------------1.00--------------------------
..............................................................................................................................CTGGTGCCCTGGCTGGCCCCAGA..................................................................................................... 231.000.00--------------------------------------------------1.00---------------------------
.................................................................................................................................................................CATCCAGTGCCCACAGAAA...................................................................... 191.000.00-----------------------------------------------------------------1.00------------
..........................................................................................................................................................................................................AGAGCCCTGCATGCCTGG.............................. 181.000.00-------------1.00----------------------------------------------------------------
............................................GGAGGGTGGAGGAAGAGGAAGC........................................................................................................................................................................................ 221.000.00----------------------------1.00-------------------------------------------------
..........................................................................................................................................................................................................AGAGCCCTGCATGCCCAACACTGA........................ 241.000.00------------------------------------------------------------1.00-----------------
............................................................................................................................................................ATTGTGGGCACTGGATGATGGC........................................................................ 2211.001.00-----------------------------1.00------------------------------------------------
........................................................................................................................................................................................................CCAGAGCCCTGCATGGGCG............................... 191.000.00-------------------------------------------1.00----------------------------------
...................................................................................................................................................................................................................CATGCCCAACACTGCGCCA.................... 191.000.00------------------------------------------------------1.00-----------------------
........................................................................................................................................................................................CTTCCTCCTGTCACACCTG............................................... 191.000.00---------------------------------------------1.00--------------------------------
....................................................................CCTGGGCTGTGGTTTGAAC................................................................................................................................................................... 191.000.00--------------------1.00---------------------------------------------------------
...................................................GGAGGAAGAGGAAGGGGGA.................................................................................................................................................................................... 191.000.00-----------------------------------------------------------1.00------------------
.........................................................................................................................................................................................................AGTGTTGGGCATGCAGGGCTCTG.......................... 2311.001.00-----------------------------1.00------------------------------------------------
.................................................................................................................CCAGAAGTGGGGAGTGC........................................................................................................................ 1730.330.33-----------------------------------------------------------------------------0.33