ID: uc003avy.3_intron_11_0_chr22_38897286_r.5p
GENE: (1)
chr22:38901756-38902005-


(1)
AGO2.ip 		(7)
B-CELL 		(4)
BRAIN 		(5)
BREAST 		(19)
CELL-LINE 		(12)
CERVIX 		(2)
HEART 		(1)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(3)
OTHER 		(36)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
ATGCGCGGAGGAGGCTTTGGGGACCGGGACCGGGATCGTGACCGTGGAGGGTAAGGGTGGGGGAGGAGAGGAGAGGCCTGGCGTGGGGGTGGGGGAGTTGCTTCTTGGGGAGGCCCGGCGGACTGCGAGCCTGGGAGCCTTGCTCTCGACCCGGGAGGCGAGGGGAGGCGACTCGAGGCGAGACAGCGGTTTCGTGCGCGGACCTCGGCCCCGGGGTCACTCGGGACCCGAGGAGGGCGGCCGCTTGGCG
......................................................................................................(((((((....((((((.........))).))).(((((.((((((..((....)))))))))))))..)))))))........................................................................
.....................................................................................................102..................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532880(GSM532880)
G659T. (cervix)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040031(GSM532916)
G013T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532882(GSM532882)
G696T. (cervix)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR040032(GSM532917)
G603N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................GGGGAGGCCCGGCGGGGA..............................................................................................................................189.000.00--4.00-------------------1.00-------2.00------------------1.00---------------------------------------1.00----------
..................................ATCGTGACCGTGGAGG........................................................................................................................................................................................................1618.008.004.00-----2.00-----------------------------------------1.00----------------1.00----------------------------------
.................................................................................................................................................................GGGGAGGCGACTCGAGGCGAGA...................................................................2217.007.00---7.00------------------------------------------------------------------------------------------------
.............................CCGGGATCGTGACCGTGGAGGATT.....................................................................................................................................................................................................243.000.00---------1.00---------------2.00--------------------------------------------------------------------------
...........AGGCTTTGGGGACCGGGACCGGGATCG....................................................................................................................................................................................................................2713.003.00-2.00------------------------------------------------------------------------------1.00-------------------
.......................................................................................................................GGACTGCGAGCCTGGGAGCCT..............................................................................................................2113.003.00----3.00-----------------------------------------------------------------------------------------------
.................TGGGGACCGGGACCGGG........................................................................................................................................................................................................................1713.003.00--------1.00----------------------2.00--------------------------------------------------------------------
.................................GATCGTGACCGTGGAGG........................................................................................................................................................................................................1713.003.00------1.00---------------------------------------------------------------1.00----------------1.00------------
.........................................................................................................TGGGGAGGCCCGGCGGGG...............................................................................................................................1812.001.00------------1.00-----------------------------------------------------1.00---------------------------------
.TGCGCGGAGGAGGCTTT........................................................................................................................................................................................................................................1712.002.00----------------------------------1.00-----------------1.00-----------------------------------------------
................................GGATCGTGACCGTGGAGGA.......................................................................................................................................................................................................192.000.00---------1.00-1.00----------------------------------------------------------------------------------------
..........................................................................................................GGGGAGGCCCGGCGGGGCA.............................................................................................................................192.000.00--------------------------1.00---------------------------1.00---------------------------------------------
..............................................................................................................................................................CGAGGGGAGGCGACTCGAGGTTTT....................................................................242.000.00-------------------2.00--------------------------------------------------------------------------------
..........................................................................................................GGGGAGGCCCGGCGGGGAC.............................................................................................................................192.000.00--1.00-----------------------1.00-------------------------------------------------------------------------
..........................................................................................................GGGGAGGCCCGGCGGGGAA.............................................................................................................................192.000.00--1.00---------------------1.00---------------------------------------------------------------------------
...................GGGACCGGGACCGGGATCGTGAC................................................................................................................................................................................................................2312.002.00--------------------------------------------------------1.00---------------------1.00---------------------
.............................................................................................................................................................................CGAGGCGAGACAGCGGTTTC.........................................................2012.002.00-------------2.00--------------------------------------------------------------------------------------
..............CTTTGGGGACCGGGACC...........................................................................................................................................................................................................................1712.002.00-------------------------------------------------------------------------------1.00-----1.00--------------
..........................................................................................................GGGGAGGCCCGGCGGGGC..............................................................................................................................182.000.00--2.00-------------------------------------------------------------------------------------------------
...............................................................AGGAGAGGAGAGGCCTGGCGTGGGGGTGGG.............................................................................................................................................................3012.002.00--------------2.00-------------------------------------------------------------------------------------
.................TGGGGACCGGGACCGGA........................................................................................................................................................................................................................1712.001.00--------------------2.00-------------------------------------------------------------------------------
......................ACCGGGACCGGGATCGTGACCGT.............................................................................................................................................................................................................2312.002.00----------------------------------------1.00----------------------------1.00------------------------------
.........................................................................................................TGGGGAGGCCCGGCGGGGA..............................................................................................................................1912.001.00-----1.00----------------1.00-----------------------------------------------------------------------------
..................GGGGACCGGGACCGGGATCG....................................................................................................................................................................................................................2012.002.00----2.00-----------------------------------------------------------------------------------------------
.......................CCGGGACCGGGATCGTGAC................................................................................................................................................................................................................1921.501.500.50-------------------------------------------------------------------------------------------0.500.50------
.........GGAGGCTTTGGGGACCGGG..............................................................................................................................................................................................................................1911.001.00----1.00-----------------------------------------------------------------------------------------------
..................................ATCGTGACCGTGGAGGGTAA....................................................................................................................................................................................................2011.001.00--------------------------------------------1.00-------------------------------------------------------
..............................................................................................................AGGCCCGGCGGACTGCGAG.........................................................................................................................1911.001.00----------------------------1.00-----------------------------------------------------------------------
........AGGAGGCTTTGGGGACCGGGA.............................................................................................................................................................................................................................2111.001.00-------------------------------------------------------------------1.00--------------------------------
..................................ATCGTGACCGTGGAGGATT.....................................................................................................................................................................................................1911.008.00-----------1.00----------------------------------------------------------------------------------------
.........................................................................................................TGGGGAGGCCCGGCGGG................................................................................................................................1711.001.00------------------------------------------------------------------------1.00---------------------------
.TGCGCGGAGGAGGCTTTGGGGACCGGGACCGGG........................................................................................................................................................................................................................3311.001.00-------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................CTGCGAGCCTGGGAGCCTTGC...........................................................................................................2111.001.00---------------------------------------------------------1.00------------------------------------------
...................GGGACCGGGACCGGGATCGTGACCGTGGAGG........................................................................................................................................................................................................3111.001.001.00---------------------------------------------------------------------------------------------------
......................ACCGGGACCGGGATCGTGACCGTGG...........................................................................................................................................................................................................2511.001.00---------------1.00------------------------------------------------------------------------------------
.......................CCGGGACCGGGATCGTGACCGTGGA..........................................................................................................................................................................................................2511.001.00----------------------------------------------------------------------------------1.00-----------------
..............................................................GAGGAGAGGAGAGGCCTGGCG.......................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------1.00---------
..............CTTTGGGGACCGGGACCGGGAT......................................................................................................................................................................................................................2211.001.00----------------------------------------------1.00-----------------------------------------------------
.......................CCGGGACCGGGATCGTGACCGTGGAGG........................................................................................................................................................................................................2711.001.00-----------------------------------------------------------1.00----------------------------------------
..............................................................................................................................................................CGAGGGGAGGCGACTCGA..........................................................................1811.001.00----------------------------------------------------------------------------1.00-----------------------
.....................GACCGGGACCGGGATCGTGAT................................................................................................................................................................................................................211.000.00-----------------------------1.00----------------------------------------------------------------------
...........................GACCGGGATCGTGACCGTGGAGGA.......................................................................................................................................................................................................241.000.001.00---------------------------------------------------------------------------------------------------
...................................TCGTGACCGTGGAGGATTT....................................................................................................................................................................................................191.000.00---------------------------------------------------1.00------------------------------------------------
....................................................................................................................................................ACCCGGGAGGCGAGGTGGG...................................................................................191.000.00-------1.00--------------------------------------------------------------------------------------------
.....................................................................................................TTCTTGGGGAGGCCCGGCGGACTG.............................................................................................................................2411.001.00---------------------------------------1.00------------------------------------------------------------
..............................CGGGATCGTGACCGTGGAGG........................................................................................................................................................................................................2011.001.00---------------1.00------------------------------------------------------------------------------------
.......................CCGGGACCGGGATCGTGACCGT.............................................................................................................................................................................................................2221.001.00-----------------------------------------------------------------------1.00----------------------------
.TGCGCGGAGGAGGCTTTGGGGACCGGGACCGGGA.......................................................................................................................................................................................................................3411.001.00-1.00--------------------------------------------------------------------------------------------------
...............TTTGGGGACCGGGACCGGGATC.....................................................................................................................................................................................................................2211.001.00----------1.00-----------------------------------------------------------------------------------------
..................GGGGACCGGGACCGGGATCGT...................................................................................................................................................................................................................2111.001.00--------------------------------1.00-------------------------------------------------------------------
..........GAGGCTTTGGGGACCGGGACCG..........................................................................................................................................................................................................................2211.001.00-----------------------1.00----------------------------------------------------------------------------
..........................GGACCGGGATCGTGACCGTGGAGGAT......................................................................................................................................................................................................261.000.00-1.00--------------------------------------------------------------------------------------------------
......................ACCGGGACCGGGATCGTGACCGTGGA..........................................................................................................................................................................................................2611.001.001.00---------------------------------------------------------------------------------------------------
.................................GATCGTGACCGTGGAGGAT......................................................................................................................................................................................................1911.003.00--------------------------------------------------------------------1.00-------------------------------
................................................................................................................................................CTCGACCCGGGAGGCGAG........................................................................................1811.001.00-----------------------------------------------------------------------------------1.00----------------
.............................................................................................................GAGGCCCGGCGGACTGCGAGC........................................................................................................................2111.001.00----------------------------1.00-----------------------------------------------------------------------
..........................................................................................................GGGGAGGCCCGGCGGGC...............................................................................................................................171.000.00--1.00-------------------------------------------------------------------------------------------------
.........................................................................................................TGGGGAGGCCCGGCGG.................................................................................................................................1611.001.00----------------------------------------------------------------1.00-----------------------------------
.................TGGGGACCGGGACCGG.........................................................................................................................................................................................................................1611.001.00--------1.00-------------------------------------------------------------------------------------------
.................TGGGGACCGGGACCGGGATCGCG..................................................................................................................................................................................................................231.000.00-1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................TCTCGACCCGGGAGGTAG.........................................................................................181.000.00------------1.00---------------------------------------------------------------------------------------
......................................................GGGTGGGGGAGGAGAGGAGAGGCCTGGCG.......................................................................................................................................................................2911.001.00----------------------------------------------------------------------------------------1.00-----------
.................TGGGGACCGGGACCGCGCA......................................................................................................................................................................................................................191.000.00-------------------------------------------1.00--------------------------------------------------------
....................................................................................................................................................ACCCGGGAGGCGAGGCCCC...................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
..................GGGGACCGGGACCGGGATCGTGAGC...............................................................................................................................................................................................................251.000.00---------------------------------1.00------------------------------------------------------------------
........AGGAGGCTTTGGGGACCGGGACCGGGA.......................................................................................................................................................................................................................2711.001.00-------1.00--------------------------------------------------------------------------------------------
.......GAGGAGGCTTTGGGGACCGGGACCG..........................................................................................................................................................................................................................2511.001.00--------------------------------1.00-------------------------------------------------------------------
................................GGATCGTGACCGTGGAG.........................................................................................................................................................................................................1711.001.00------1.00---------------------------------------------------------------------------------------------
..............................................................................................................................GAGCCTGGGAGCCTTGGGAG........................................................................................................201.000.00-------1.00--------------------------------------------------------------------------------------------
..............................CGGGATCGTGACCGTGGAGGGT......................................................................................................................................................................................................2211.001.00------------------------------------------1.00---------------------------------------------------------
................TTGGGGACCGGGACCGG.........................................................................................................................................................................................................................1711.001.001.00---------------------------------------------------------------------------------------------------
......................ACCGGGACCGGGATCGTGAC................................................................................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GGGACCCGAGGAGGGCT...........171.000.00---------------------------------------------------------------------------1.00------------------------
............GGCTTTGGGGACCGGGACCG..........................................................................................................................................................................................................................2011.001.00-----------------1.00----------------------------------------------------------------------------------
.................TGGGGACCGGGACCGGGG.......................................................................................................................................................................................................................1811.003.00-----1.00----------------------------------------------------------------------------------------------
..........GAGGCTTTGGGGACCGGGACCGGGATCGTGAC................................................................................................................................................................................................................3211.001.001.00---------------------------------------------------------------------------------------------------
.............................CCGGGATCGTGACCGTGGAGGA.......................................................................................................................................................................................................221.000.00-----------------------------------------------1.00----------------------------------------------------
.....CGGAGGAGGCTTTGGGGA...................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------1.00---------------
........................CGGGACCGGGATCGTGACCGTGGAGG........................................................................................................................................................................................................2611.001.00-------------------------------------------------------------1.00--------------------------------------
....................................................................................................................................................ACCCGGGAGGCGAGGCAGG...................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................ACTCGGGACCCGAGGAGGGCGGCT........241.000.00---------------------------------------------------------------------------------1.00------------------
...........AGGCTTTGGGGACCGGGACCGGGAT......................................................................................................................................................................................................................2511.001.00-1.00--------------------------------------------------------------------------------------------------
...........AGGCTTTGGGGACCGGGACCGG.........................................................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------1.00-------------
..................................ATCGTGACCGTGGAGGAT......................................................................................................................................................................................................1811.008.00-----------1.00----------------------------------------------------------------------------------------
........................................................................................................TTGGGGAGGCCCGGCGGA................................................................................................................................1811.001.00-------------------------------------------------------------------------1.00--------------------------
.TGCGCGGAGGAGGCTTTGGGGACCGG...............................................................................................................................................................................................................................2611.001.00-------------------------------------------------------1.00--------------------------------------------
.............GCTTTGGGGACCGGGACCGGG........................................................................................................................................................................................................................2111.001.00-----------------1.00----------------------------------------------------------------------------------
......GGAGGAGGCTTTGGGGAC..................................................................................................................................................................................................................................1811.001.00---1.00------------------------------------------------------------------------------------------------
..........................GGACCGGGATCGTGACCGTGGAGGATTT....................................................................................................................................................................................................281.000.001.00---------------------------------------------------------------------------------------------------
....................GGACCGGGACCGGGATCGTGACA...............................................................................................................................................................................................................231.000.00-------------1.00--------------------------------------------------------------------------------------
.........GGAGGCTTTGGGGACCGGGACC...........................................................................................................................................................................................................................2211.001.00---------------------1.00------------------------------------------------------------------------------
............................ACCGGGATCGTGACCGTGGAGGATT.....................................................................................................................................................................................................251.000.001.00---------------------------------------------------------------------------------------------------
.........................................................................................................TGGGGAGGCCCGGCGGGGAA.............................................................................................................................2011.001.00------------------------------------------------------------1.00---------------------------------------
...........AGGCTTTGGGGACCGGGACCGGGA.......................................................................................................................................................................................................................2411.001.00-1.00--------------------------------------------------------------------------------------------------
..........................................................................................................GGGGAGGCCCGGCGGGTGA.............................................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------
.....................GACCGGGACCGGGATCGTGAC................................................................................................................................................................................................................2111.001.00-----------------------------1.00----------------------------------------------------------------------
.....CGGAGGAGGCTTTGGGGACCGG...............................................................................................................................................................................................................................2211.001.00---------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................CGGACCTCGGCCCCGGCCG.................................191.000.00----------------1.00-----------------------------------------------------------------------------------
..........................................................................................................................................................................ACTCGAGGCGAGACAGCG..............................................................1811.001.00--------------------------------------------------------------------------1.00-------------------------
...........AGGCTTTGGGGACCGGGACCG..........................................................................................................................................................................................................................2111.001.00----------------1.00-----------------------------------------------------------------------------------
.........................................................................................................TGGGGAGGCCCGGCGGGGGT.............................................................................................................................2011.001.00------------------------1.00---------------------------------------------------------------------------
..............................CGGGATCGTGACCGTGG...........................................................................................................................................................................................................1711.001.00-----------------------------------1.00----------------------------------------------------------------
..................................................................AGAGGAGAGGCCTGGCTT......................................................................................................................................................................181.000.00-----------------------------------------1.00----------------------------------------------------------
.......................CCGGGACCGGGATCGTGA.................................................................................................................................................................................................................1821.001.00-------------------------------------0.50--------------------------------------------------------0.50-----
.......................CCGGGACCGGGATCG....................................................................................................................................................................................................................1550.600.60------0.20-----------------------------------------------------------------------------------------0.40---
..GCGCGGAGGAGGCTTTG.......................................................................................................................................................................................................................................1720.500.50------------------------------------0.50---------------------------------------------------------------
.......................CCGGGACCGGGATCGTGACCG..............................................................................................................................................................................................................2120.500.50-------------------------------------------------------------------------------------------0.50--------
...................GGGACCGGGACCGGGATC.....................................................................................................................................................................................................................1820.500.50------------------------------------0.50---------------------------------------------------------------
.TGCGCGGAGGAGGCT..........................................................................................................................................................................................................................................1520.500.50-0.50--------------------------------------------------------------------------------------------------
........................CGGGACCGGGATCGTGAC................................................................................................................................................................................................................1820.500.50-----------------------------------0.50----------------------------------------------------------------
................TTGGGGACCGGGACC...........................................................................................................................................................................................................................1530.330.330.33---------------------------------------------------------------------------------------------------
..................GGGGACCGGGACCGG.........................................................................................................................................................................................................................1530.330.33--------0.33-------------------------------------------------------------------------------------------
...........AGGCTTTGGGGACCG................................................................................................................................................................................................................................1540.250.25-------------------------------------0.25--------------------------------------------------------------

Antisense strand
ATGCGCGGAGGAGGCTTTGGGGACCGGGACCGGGATCGTGACCGTGGAGGGTAAGGGTGGGGGAGGAGAGGAGAGGCCTGGCGTGGGGGTGGGGGAGTTGCTTCTTGGGGAGGCCCGGCGGACTGCGAGCCTGGGAGCCTTGCTCTCGACCCGGGAGGCGAGGGGAGGCGACTCGAGGCGAGACAGCGGTTTCGTGCGCGGACCTCGGCCCCGGGGTCACTCGGGACCCGAGGAGGGCGGCCGCTTGGCG
......................................................................................................(((((((....((((((.........))).))).(((((.((((((..((....)))))))))))))..)))))))........................................................................
.....................................................................................................102..................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040028(GSM532913)
G026N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532880(GSM532880)
G659T. (cervix)		GSM339995(GSM339995)
hues6NP. (cell line)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR040031(GSM532916)
G013T. (cervix)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532882(GSM532882)
G696T. (cervix)		SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR040032(GSM532917)
G603N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		TAX577738(Rovira)
total RNA. (breast)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR038856(GSM458539)
D11. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
..........................................................................................................................................................................................................CCTCGGCCCCGGGGTGAGC............................. 193.670.00-----3.33---------0.33------------------------------------------------------------------------------------
......................CACGATCCCGGTCCCGGT.................................................................................................................................................................................................................. 1812.002.00------------------2.00---------------------------------------------------------------------------------
.................TGGGGACCGGGACCGGGAGA..................................................................................................................................................................................................................... 201.000.00--------------------------------------------------------------1.00-------------------------------------
...................................................................................................................................................................................................CCCGGGGCCGAGGTCCGCGC................................... 2011.001.00----------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................CCGGGGCCGAGGTCCG.................................... 1611.001.00--------------------------------------1.00-------------------------------------------------------------
..........................................................GGGGGAGGAGAGGAGAGGCAG........................................................................................................................................................................... 211.000.00---------------------------1.00------------------------------------------------------------------------
........................................................................................................................................................................................................GACCTCGGCCCCGGGG.................................. 161.000.00----------0.50---0.50-------------------------------------------------------------------------------------
...CCCAAAGCCTCCTCCGCG..................................................................................................................................................................................................................................... 1811.001.00---------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................CGCCTCCCCTCGCCTCCCGGGT................................................................................ 2211.001.00---------------------------------------------1.00------------------------------------------------------
..........................................................................................................GGGGAGGCCCGGCGGCTCT............................................................................................................................. 191.000.00--------1.00-------------------------------------------------------------------------------------------
.............................................................................................CTCCCCAAGAAGCAACTCC.......................................................................................................................................... 1911.001.00------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GACCTCGGCCCCGGGGCGG............................... 191.000.00----------0.50------------------------------------------------------------------------------------0.50----
.....................................................................................................................................................................................GACAGCGGTTTCGTGATCG.................................................. 191.000.00-----------------------------------------------------------------------------1.00----------------------
.....................................................................................................................................GGAGCCTTGCTCTCGATGA.................................................................................................. 191.000.00--------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................................GACCCGGGAGGCGAGGGGACAGG................................................................................ 231.000.00-1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................GGAGCCTTGCTCTCGAA.................................................................................................... 171.000.00---------------------------1.00------------------------------------------------------------------------
....CGGTCCCCAAAGCCTCCTCCGC................................................................................................................................................................................................................................ 2211.001.00------------1.00---------------------------------------------------------------------------------------
......................................................................................................................................................................................................CGGACCTCGGCCCCGGGGC................................. 191.000.00----------------------------------------------------------1.00-----------------------------------------
...........................................................................................................................................................................................................CTCGGCCCCGGGGTCTGGA............................ 191.000.00---------------------------------------------------------------1.00------------------------------------
............................................................................................................................GCGAGCCTGGGAGCCTTGT........................................................................................................... 191.000.00-----------------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................CCTCGGCCCCGGGGTGAG.............................. 180.670.00-----0.67----------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GACCTCGGCCCCGGGGCGA............................... 190.500.00------------------------------------0.50---------------------------------------------------------------
........................................................................................................................................................................................................CCCGGGGCCGAGGTC................................... 1520.500.50-------------------------------------0.50--------------------------------------------------------------
.........................................................................................................................................................................................................CCCCGGGGCCGAGGT.................................. 1530.330.33---------------------------------------------------------------------------------------------------0.33
..........................................................................................................................................................................................................ACCCCGGGGCCGAGG................................. 1530.330.33--------------------------------------------------------------------------------------------------0.33-
............CCCGGTCCCCAAAGCC.............................................................................................................................................................................................................................. 1630.330.33---------0.33------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CCTCGGCCCCGGGGTGC............................... 170.330.00-------------------------------------------------------------------------------------------------0.33--