ID: uc003amt.2_intron_0_0_chr22_32871386_f.3p
GENE: (1)
chr22:32874920-32875169+


(1)
AGO2.ip 		(1)
AGO3.ip 		(8)
B-CELL 		(5)
BRAIN 		(3)
BREAST 		(16)
CELL-LINE 		(4)
CERVIX 		(6)
HEART 		(4)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(15)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
TATTAGAAGTAGGTAGTTCTTACTATGCTTATCTGTCTTTCTTGGCAGTTCTAATACCCGATTTACAATTACATTGAACTACAAGGATCCCCTCACTGGAGATGAAGAGACCTTGGCTTCATATGGGATTGTTTCTGGGGACTTGATATGTTTGATTCTTCAAGATGACATTCCAGCGCCTAATATACCTTCATCCACAGATTCAGAGCATTCTTCACTCCAGAATAATGAGCAACCCTCTTTGGCCACC
..............................................................................................................................((.((((((((..((.((((.....)))).))..)).)).)))).)).............................................................................
.................................................................................................................114........................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR343334RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040019(GSM532904)
G701T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040040(GSM532925)
G612N. (cervix)		SRR029124(GSM416753)
HeLa. (hela)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
......................................................................................................................TCATATGGGATTGTTTCTGGGG..............................................................................................................2215.005.00-----4.00---------------------------1.00----------------------------------------------
..............................................................................................................CCTTGGCTTCATATGGG...........................................................................................................................1714.004.00------4.00-------------------------------------------------------------------------
................................................................................................TGGAGATGAAGAGACCTTGGCTTC..................................................................................................................................2414.004.00-----------3.00-----------------------------------------1.00--------------------------
..................................................................................................................GGCTTCATATGGGATTGTTTCT..................................................................................................................2214.004.00-2.002.00-----------------------------------------------------------------------------
...................................................................................................................GCTTCATATGGGATTGTTTCTGGGG..............................................................................................................2513.003.003.00-------------------------------------------------------------------------------
.........................................................................................................................TATGGGATTGTTTCTGGGGACTTGATA......................................................................................................2713.003.00----3.00---------------------------------------------------------------------------
..................................................................................................................................................................................................CCACAGATTCAGAGCATTC.....................................1913.003.00----------------------2.00---------------------------1.00-----------------------------
.....................................................................................................................................................GTTTGATTCTTCAAGATGAC.................................................................................2013.003.00-----------------2.00------------------------------------1.00-------------------------
......................................................................................................................TCATATGGGATTGTTTCTGG................................................................................................................2012.002.001.00-------------1.00-----------------------------------------------------------------
..............................................................................................ACTGGAGATGAAGAGACCTTGGCT....................................................................................................................................2412.002.00-1.001.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAATAATGAGCAACC.............1612.002.00------------1.00---------------------------1.00---------------------------------------
...............................................................................TACAAGGATCCCCTCACTGGAGA....................................................................................................................................................2312.002.002.00-------------------------------------------------------------------------------
................................................................................................TGGAGATGAAGAGACCTTT.......................................................................................................................................192.000.00---2.00----------------------------------------------------------------------------
..............................................................................................ACTGGAGATGAAGAGACCTT........................................................................................................................................2012.002.00--------------------------------1.00---------------------------------1.00-------------
..............................................................................................................................................................................................TCATCCACAGATTCAGAGCATTCTTCACTCCAG...........................3312.002.00---------------------2.00----------------------------------------------------------
................................................................................................TGGAGATGAAGAGACCTTGGCTT...................................................................................................................................2312.002.00--------------------------------------1.00----------1.00------------------------------
...............................................................................................................CTTGGCTTCATATGGGATTGTTTCTGGGGACTT..........................................................................................................3312.002.00-------2.00------------------------------------------------------------------------
.................................................................................................................................................................................................TCCACAGATTCAGAGCATTCTTCACT...............................2612.002.00-1.001.00-----------------------------------------------------------------------------
......................................................................................................................TCATATGGGATTGTTTCT..................................................................................................................1812.002.00-1.001.00-----------------------------------------------------------------------------
................................................................................................................................................................................CGCCTAATATACCTTCATCCACAG..................................................2412.002.00-------------1.00------------------------------------------1.00-----------------------
.........................................................................................................................................................................................................................................AACCCTCTTTGGCCACCAGAC212.000.00--------2.00-----------------------------------------------------------------------
.............................................................................................CACTGGAGATGAAGAGACCTTGGCT....................................................................................................................................2512.002.00--------------------1.00--------------------------------------------1.00--------------
...............................................................................................CTGGAGATGAAGAGACCTT........................................................................................................................................1912.002.00--------------------------2.00-----------------------------------------------------
........................................................................................CCCCTCACTGGAGATGAAGAGA............................................................................................................................................2212.002.00-----2.00--------------------------------------------------------------------------
...............................................................................TACAAGGATCCCCTCACTGGAGAT...................................................................................................................................................2412.002.002.00-------------------------------------------------------------------------------
...................................................................................................................................................ATGTTTGATTCTTCACTTC....................................................................................191.000.00--------1.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................CTTCACTCCAGAATAATGAGCAACCCTC..........2811.001.00------------------------------------------------------------------------1.00-------
...................................................................................................................GCTTCATATGGGATTGTTTCTGGGGACTTGATATT....................................................................................................351.000.00----------------------------------------------------------------------1.00---------
......................................................................................................................TCATATGGGATTGTTTCTG.................................................................................................................1911.001.00------------1.00-------------------------------------------------------------------
.......................................................................................................................CATATGGGATTGTTTCTGGGGACTTGA........................................................................................................2711.001.00----1.00---------------------------------------------------------------------------
...........................................................GATTTACAATTACATTGAAC...........................................................................................................................................................................2011.001.00---------1.00----------------------------------------------------------------------
......................................................................................................................................................................................................................................AGCAACCCTCTTTGGCCAC.1911.001.00-1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TTCACTCCAGAATAATGAGCAACCCT...........2611.001.00----1.00---------------------------------------------------------------------------
..............................................................................................ACTGGAGATGAAGAGACGTT........................................................................................................................................201.000.00----------------1.00---------------------------------------------------------------
.............................................................TTTACAATTACATTGAACTACAAG.....................................................................................................................................................................2411.001.00-------------------------------------1.00------------------------------------------
.............................................................................................................................................................CTTCAAGATGACATTCCAGCGCCTAAT..................................................................2711.001.00--1.00-----------------------------------------------------------------------------
...........................................................................................CTCACTGGAGATGAAGAGAC...........................................................................................................................................2011.001.00---1.00----------------------------------------------------------------------------
........................................................................ATTGAACTACAAGGATCCCCTCACTGGAGATGA.................................................................................................................................................3311.001.00-------1.00------------------------------------------------------------------------
...................................................................................AGGATCCCCTCACTGGAGATGAAGAG.............................................................................................................................................2611.001.00------------------------1.00-------------------------------------------------------
...........................................................................................................................................................................................................................CCAGAATAATGAGCAACCCT...........2011.001.00------------------------------1.00-------------------------------------------------
..............................................................................................................................GATTGTTTCTGGGGACTTGATATG....................................................................................................2411.001.001.00-------------------------------------------------------------------------------
.......................................................................................................................CATATGGGATTGTTTGGGC................................................................................................................191.000.00------1.00-------------------------------------------------------------------------
............................................................................AACTACAAGGATCCCCTCACTGGAGA....................................................................................................................................................2611.001.00-------------------------------------------------------------------1.00------------
............................................................................................................................GGGATTGTTTCTGGGGACTTGATATGTTTGA...............................................................................................3111.001.00-------1.00------------------------------------------------------------------------
................................................................................................................................................................................................ATCCACAGATTCAGAGCATTCTTCA.................................2511.001.00--1.00-----------------------------------------------------------------------------
......................................................................................................................TCATATGGGATTGTTTGGAA................................................................................................................201.000.00--------------------------------------------1.00-----------------------------------
.................................................................................................GGAGATGAAGAGACCTTGGCTT...................................................................................................................................2211.001.00-1.00------------------------------------------------------------------------------
.........................................................................................................................TATGGGATTGTTTCTGGGGACT...........................................................................................................2211.001.001.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................GATTCAGAGCATTCTTCACTCCAGA..........................2511.001.00--------------1.00-----------------------------------------------------------------
...................................................................................................................................................ATGTTTGATTCTTCATTTT....................................................................................191.000.00--------1.00-----------------------------------------------------------------------
........................................................................................................................ATATGGGATTGTTTCTGGG...............................................................................................................1921.001.001.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................TATACCTTCATCCACAGATTCAGAG..........................................2511.001.00--1.00-----------------------------------------------------------------------------
...................................................................................................................................................ATGTTTGATTCTTCACTTT....................................................................................191.000.00--------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAATAATGAGCAACCC............1711.001.00---------------1.00----------------------------------------------------------------
...............................................................................................CTGGAGATGAAGAGACCTTGG......................................................................................................................................2111.001.00-------------------1.00------------------------------------------------------------
..........................................................................................................................ATGGGATTGTTTCTGGGGACTTGATA......................................................................................................2611.001.00---------------------------------------------------------------1.00----------------
...................................................................ATTACATTGAACTACAAGGATCC................................................................................................................................................................2311.001.00--1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................TAATATACCTTCATCCACAGATTCA.............................................2511.001.00---------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................TTCACTCCAGAATAATGAGCA................2111.001.00-----------------------------------------------------------------------1.00--------
................................................................................................................................................GATATGTTTGATTCTTCAAG......................................................................................2011.001.00-------------------------------------------------------------1.00------------------
...........................................................................................................................................................................................CCTTCATCCACAGATTCAGAGCATTCTT...................................2811.001.00----------------------------------------------------------------1.00---------------
.....................................................................................................................................................................................AATATACCTTCATCCACAGATTCAG............................................2511.001.00----------------------------------------------------1.00---------------------------
...........................................................................................CTCACTGGAGATGAAGAGACCTTG.......................................................................................................................................2411.001.00--------------------1.00-----------------------------------------------------------
.............................................................................................................................................................CTTCAAGATGACATTCCAGC.........................................................................2011.001.00------------------------------------------1.00-------------------------------------
...............................................................................................................................ATTGTTTCTGGGGACTTGATATGT...................................................................................................2411.001.00----------------------------------------------------------1.00---------------------
.........................................................................................................................................................GATTCTTCAAGATGACATTCCAGCGC.......................................................................2611.001.00-------------------------1.00------------------------------------------------------
.......................................................................................................................................................................................................................CACTCCAGAATAATGAGCA................1911.001.00-----------------------------------------------------------1.00--------------------
.........................................................................................................................TATGGGATTGTTTCTGAAC..............................................................................................................191.000.00-1.00------------------------------------------------------------------------------
.......................................................................................................................CATATGGGATTGTTTCTTGGG..............................................................................................................211.000.00------------------------------------------------1.00-------------------------------
........................................................................................................................ATATGGGATTGTTTCTGGGG..............................................................................................................2011.001.001.00-------------------------------------------------------------------------------
...............................................................................................CTGGAGATGAAGAGACCT.........................................................................................................................................1811.001.00---1.00----------------------------------------------------------------------------
...................................................................................................................GCTTCATATGGGATTGTTTCTGG................................................................................................................2311.001.00---------------------------------------------------------1.00----------------------
...............................................................................................................................................TGATATGTTTGATTCTTTAG.......................................................................................201.000.00----------1.00---------------------------------------------------------------------
......................................................................................................................................................................................................................TCACTCCAGAATAATGAGCAACCC............2411.001.00--------------------------------------------------------------1.00-----------------
.................................................................................................................................................................................................TCCACAGATTCAGAGCATTCTTCACTCCAG...........................3011.001.00--1.00-----------------------------------------------------------------------------
...........................................................................................CTCACTGGAGATGAAGAGACA..........................................................................................................................................2111.001.00---------------------------------------------1.00----------------------------------
...................................................................................................AGATGAAGAGACCTTGGCT....................................................................................................................................1911.001.00-----------------------------------------1.00--------------------------------------
.............................................................................................CACTGGAGATGAAGAGACCTTGG......................................................................................................................................2311.001.00-------------------1.00------------------------------------------------------------
............................................................................................................................................................TCTTCAAGATGACATTCCAGCGCC......................................................................2411.001.00-1.00------------------------------------------------------------------------------
.............................................................................................CACTGGAGATGAAGAGACC..........................................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------
...............................................................................................................................ATTGTTTCTGGGGACTTGAT.......................................................................................................2011.001.001.00-------------------------------------------------------------------------------
......................................................................ACATTGAACTACAAGGATCC................................................................................................................................................................2011.001.00------------1.00-------------------------------------------------------------------
...........................................................................................................................TGGGATTGTTTCTGGGGAC............................................................................................................1911.001.00---------1.00----------------------------------------------------------------------
............................................................ATTTACAATTACATTGAACTACAAG.....................................................................................................................................................................2511.001.00-------------1.00------------------------------------------------------------------
.............................................................................................................ACCTTGGCTTCATATGGGATTGTTTCTGG................................................................................................................2911.001.00------------------------------------------------------------1.00-------------------
.................................................................................................GGAGATGAAGAGACCTTGGCTCCA.................................................................................................................................241.000.00------------------------1.00-------------------------------------------------------
............................................................................................................................................................................................................................CAGAATAATGAGCAACC.............1711.001.00----------------------------------------------1.00---------------------------------
...........................................................................................................................................................................................................................CCAGAATAATGAGCAACCC............1911.001.00----------------1.00---------------------------------------------------------------
............................................................................................................................GGGATTGTTTCTGGGGACT...........................................................................................................1911.001.001.00-------------------------------------------------------------------------------
........................................................................................................................................GGGGACTTGATATGTTTGA...............................................................................................1911.001.00-------------------------------------------------------------------------1.00------
.....................................................................................................................................TCTGGGGACTTGATATGTTTGAT..............................................................................................2311.001.00-1.00------------------------------------------------------------------------------
.......................................................................................................................................................................................................GATTCAGAGCATTCTTCACTCC.............................2211.001.00-------------------------1.00------------------------------------------------------
..............................................................................................ACTGGAGATGAAGAGACCTTG.......................................................................................................................................2111.001.00------------------------------------1.00-------------------------------------------
.....................................................................................................................................................................................................................TTCACTCCAGAATAATGAGCT................211.000.00-----------------------1.00--------------------------------------------------------
............................................................................................TCACTGGAGATGAAGAGACCTTGGC.....................................................................................................................................2511.001.00-1.00------------------------------------------------------------------------------
...........................................................................................................................TGGGATTGTTTCTGGGGACTTGAT.......................................................................................................2411.001.00-1.00------------------------------------------------------------------------------
.............................................................................................CACTGGAGATGAAGAGACCTTGGC.....................................................................................................................................2411.001.00---------1.00----------------------------------------------------------------------
............................................................ATTTACAATTACATTGAACTACAAT.....................................................................................................................................................................251.000.00----------1.00---------------------------------------------------------------------
.............................................................................................................................................CTTGATATGTTTGATTCTTCAAGATGAC.................................................................................2811.001.00------------------1.00-------------------------------------------------------------
...............................................................................................................................................TGATATGTTTGATTCTAG.........................................................................................181.000.00----------1.00---------------------------------------------------------------------
..........................................................................................................................................................ATTCTTCAAGATGACATTCCAGCGCC......................................................................2611.001.00--1.00-----------------------------------------------------------------------------
.................................................................................................................TGGCTTCATATGGGATTGTTT....................................................................................................................2111.001.00--------------------------------------------------------------------1.00-----------
...........................................................................................CTCACTGGAGATGAAGAGACCTT........................................................................................................................................2311.001.00-----------------------------------------------1.00--------------------------------
.........................................................................................................................TATGGGATTGTTTCTGGGGA.............................................................................................................2011.001.00---1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................CTTCACTCCAGAATAATGA...................1911.001.00----------------------------------1.00---------------------------------------------
...........................................................................................................................................................................................................................CCAGAATAATGAGCAACCCTCTTTGGC....2711.001.00-----------------------1.00--------------------------------------------------------
............................................................................................................................................................................................................................CAGAATAATGAGCAACCCTCTTTGGC....2611.001.00---------------------------------------------------------------------1.00----------
.........................................................................................................AGAGACCTTGGCTTCATATGG............................................................................................................................2111.001.00--1.00-----------------------------------------------------------------------------
....................................................AATACCCGATTTACAATTACATTGAA............................................................................................................................................................................2611.001.00---------------------------------------------------1.00----------------------------
..........................................................................................CCTCACTGGAGATGAAGAGACCT.........................................................................................................................................2311.001.00-------------------------------------------------------1.00------------------------
....................................................................................................................................................................................................ACAGATTCAGAGCATTCTTCACTCCAG...........................2711.001.00---------------1.00----------------------------------------------------------------
..........................................................................................CCTCACTGGAGATGAAGAGACCTTGGC.....................................................................................................................................2711.001.00---------------------------1.00----------------------------------------------------
....................................................................................................................................TTCTGGGGACTTGATATGTTTGATT.............................................................................................2511.001.00-------------------------------1.00------------------------------------------------
...........................................................................................................................TGGGATTGTTTCTGGGGACTTGATATGTTTGA...............................................................................................3211.001.00-------1.00------------------------------------------------------------------------
...........................................................................................CTCACTGGAGATGAAGAGACC..........................................................................................................................................2111.001.00-1.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................TCTTCACTCCAGAATAATGA...................2011.001.00----------------------------1.00---------------------------------------------------
.........................................................................TTGAACTACAAGGATCCCCTCACTGGAGA....................................................................................................................................................2911.001.00-----------------------------------1.00--------------------------------------------
...............................................................................................................................................TGATATGTTTGATTCTTCAAGATGACA................................................................................2711.001.00----1.00---------------------------------------------------------------------------
.........................................................................TTGAACTACAAGGATC.................................................................................................................................................................1620.500.50---------------------------0.50----------------------------------------------------
................................................................................................................................................................................................................CATTCTTCACTCCAGAATA.......................1920.500.50----------------------------0.50---------------------------------------------------
........................................................................................................................................................................................ATACCTTCATCCACAGAT................................................1820.500.50---------------------------------------------------------------------------0.50----
..........................................................................................................................ATGGGATTGTTTCTGGGGA.............................................................................................................1920.500.50--------------------------------------------------------------------------0.50-----
........................................................................................................................................................................................ATACCTTCATCCACAG..................................................1630.330.33-------------0.33------------------------------------------------------------------
............................................................................................................................GGGATTGTTTCTGGGGA.............................................................................................................1740.250.25-----------------------------------------------------------------------------0.25--
.........................................................................................................................TATGGGATTGTTTCTGG................................................................................................................1740.250.25-----------------------------0.25--------------------------------------------------
.................................................................................................................................................................................................................ATTCTTCACTCCAGAAT........................1740.250.25----------------------------------------------------------------------------0.25---
......................................................................................................TGAAGAGACCTTGGC.....................................................................................................................................1550.200.20------------------------------0.20-------------------------------------------------
..............................................................................CTACAAGGATCCCCT.............................................................................................................................................................1550.200.20------------------------------------------------------------------------------0.20-

Antisense strand
TATTAGAAGTAGGTAGTTCTTACTATGCTTATCTGTCTTTCTTGGCAGTTCTAATACCCGATTTACAATTACATTGAACTACAAGGATCCCCTCACTGGAGATGAAGAGACCTTGGCTTCATATGGGATTGTTTCTGGGGACTTGATATGTTTGATTCTTCAAGATGACATTCCAGCGCCTAATATACCTTCATCCACAGATTCAGAGCATTCTTCACTCCAGAATAATGAGCAACCCTCTTTGGCCACC
..............................................................................................................................((.((((((((..((.((((.....)))).))..)).)).)))).)).............................................................................
.................................................................................................................114........................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189782SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR343334RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189783SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR040019(GSM532904)
G701T. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343335SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040040(GSM532925)
G612N. (cervix)		SRR029124(GSM416753)
HeLa. (hela)		SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
.ATTAGAAGTAGGTAGTTCGT..................................................................................................................................................................................................................................... 201.000.00-----------------------------1.00--------------------------------------------------
.......................................................................CATTGAACTACAAGGATGAT............................................................................................................................................................... 201.000.00------------------1.00-------------------------------------------------------------
...........................................................................................................................................................................................................ATTATTCTGGAGTGAAGAATGCTCTG..................... 2611.001.00-------------------------------------------1.00------------------------------------
..............................................................................................................CATATGAAGCCAAGG............................................................................................................................. 1580.120.12-------------------------------------------------------------------------------0.12