ID: uc003ami.2_intron_1_0_chr22_32617010_r.5p
GENE: (13)
chr22:32620054-32620303-


(2)
AGO2.ip
(4)
B-CELL
(1)
BREAST
(14)
CELL-LINE
(1)
CERVIX
(1)
LIVER
(1)
OTHER
(8)
SKIN

Sense strand
TGGTCACCCTGGGAATTTCCCTCTTAACAAAACCCATTCCTGATGTACATGTGAGTGATGAGTAATGAATACATGCTAATTTTAAATAAGAGTTCTTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGTTAACACGGTGAAACCTTGTCTCTACTAAAAATACAAAAAATTAGCTGGGTGTGGTGGTGGG
..............................................................................................(((((((.......((((.((.(((((((..((((((....)))))).......)))))))))))))..)))))))................................................................................
..............................................................................................95...............................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR029129(GSM416758)
SW480. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577579(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................CGGGCGGATCACGAGGTCATGAA..............................................................................238.000.00--8.00---------------------------
.............................................................................................................................................................TCACGAGGTCAGGAGATGGAGACCATCCGGC..............................................................313.000.003.00-----------------------------
..................................................................................................................................................................AGGTCAGGAGATGGAGACCATCCGGCC.............................................................273.000.002.001.00----------------------------
...................................................................................................CCGGGCGCAGTGGCTCACGCAGA................................................................................................................................233.000.00---3.00--------------------------
.....................................................................................................................................................................TCAGGAGATGGAGACCATCCGGCT.............................................................243.000.00-3.00----------------------------
...................................................................................................CCGGGCGCAGTGGCTCACGCCAAGA..............................................................................................................................252.000.00-------2.00----------------------
.....................................................................................................................................................................TCAGGAGATGGAGACCATCCGGCC.............................................................242.000.00-2.00----------------------------
...............................................................................................................................................CCAAGGCGGGCGGATCACGAGAAA...................................................................................242.000.00--------2.00---------------------
......................................................................................................................................................................CAGGAGATGGAGACCAAAA.................................................................192.000.00-----2.00------------------------
..................................................................................................................................................AGGCGGGCGGATCACGAGGGCGG.................................................................................231.000.00----------1.00-------------------
.............................................................................................................................................................TCACGAGGTCAGGAGATGGAGACCATCCCGCC.............................................................321.000.00-1.00----------------------------
.............................................................................................................................................................TCACGAGGTCAGGAGATGGAGACCATCCGGCC.............................................................321.000.00-1.00----------------------------
................................................................................................TGGCCGGGCGCAGTGGCTCACGCGCG................................................................................................................................261.000.00-1.00----------------------------
.....................................................................................................................................................CGGGCGGATCACGAGGTTAGG................................................................................211.000.00-------------------------1.00----
................................................................................................TGGCCGGGCGCAGTGGCTCACGCCTGTACCC...........................................................................................................................311.000.001.00-----------------------------
..............................................................................................................................................GCCAAGGCGGGCGGATCACGAGGGAA..................................................................................261.000.00---------1.00--------------------
........................................................................................................................................................................GGAGATGGAGACCATCCGGCT.............................................................211.000.00-1.00----------------------------
................................................................................................TGGCCGGGCGCAGTGGCTCACGCTCG................................................................................................................................261.000.001.00-----------------------------
................................................................................................TGGCCGGGCGCAGTGGCTCACGCTTCT...............................................................................................................................271.000.001.00-----------------------------
.................................................................................................GGCCGGGCGCAGTGGCTCACGCGCT................................................................................................................................251.000.00---------------1.00--------------
..............................................................................................................................................................CACGAGGTCAGGAGATGGAGAGT.....................................................................231.000.00------------------------1.00-----
...............................................................................................................................................CCAAGGCGGGCGGATCACGAGGAA...................................................................................241.000.00---------1.00--------------------
.....................................................................................................GGGCGCAGTGGCTCACGCCTGTAATCCCCGA......................................................................................................................311.000.00--------------1.00---------------
.................................................................................................................................................AAGGCGGGCGGATCACGAGGTAT..................................................................................231.000.00---------------------1.00--------
......................................................................................................................................TTTGGGAGGCCAAGGCGGGCGGAACCC.........................................................................................271.000.001.00-----------------------------
............................................................................................................................................................ATCACGAGGTCAGGAGATGGAGACCATCGCAG..............................................................321.000.001.00-----------------------------
.....................................................................................................................................................CGGGCGGATCACGAGGTCAGGTGC.............................................................................241.000.00-----------1.00------------------
...............................................................................................................................................................ACGAGGTCAGGAGATGGAGACCATCCGGC..............................................................291.000.00-1.00----------------------------
.................................................................................................................................................................................................................................AAAATTAGCTGGGTGTGGTGGTGGGAC271.000.001.00-----------------------------
.........................................................................................................................................................................................................................................CTGGGTGTGGTGGTGGGGGGC211.000.00-----------------1.00------------
.................................................................................................................................................AAGGCGGGCGGATCACGAGTAAA..................................................................................231.000.00-----------------------1.00------
..............................................................................................................................CCCAGCACTTTGGGAGGCCAAGGCGCCGT...............................................................................................291.000.00------1.00-----------------------
.............................................................................................................................................................................................................................ACAAAAAATTAGCTGGGTGTGGTGG....2501.001.00------------------1.00-----------
.................................................................................................................................................................................................ACGGTGAAACCTTGTCTCTACTAAAAACATG..........................311.000.00---------------------------1.00--
.........................................................................................................................................................CGGATCACGAGGTCAGGAGATGGA.........................................................................2401.001.00----------------------1.00-------
.......................................................................................................................................TTGGGAGGCCAAGGCGGGCGGAAG...........................................................................................241.000.001.00-----------------------------
.................................................................................................................................................AAGGCGGGCGGATCACGAGCCAG..................................................................................231.000.00-1.00----------------------------
............................................................................................................................................................ATCACGAGGTCAGGAGATGGGCG.......................................................................231.000.00-1.00----------------------------
................................................................................................TGGCCGGGCGCAGTGGCTCACGCTCGC...............................................................................................................................271.000.00-1.00----------------------------
..................................................................................................................................................................AGGTCAGGAGATGGAGACCATCCGGC..............................................................261.000.001.00-----------------------------
...................................................................................................CCGGGCGCAGTGGCTCACGCCAA................................................................................................................................231.000.00---1.00--------------------------
................................................................................................TGGCCGGGCGCAGTGGCTCACGCTCGT...............................................................................................................................271.000.00-1.00----------------------------
.............................................................................................................................................................TCACGAGGTCAGGAGATGGAGACCATCCGGCA.............................................................321.000.00-1.00----------------------------
.....................................................................................................................................................CGGGCGGATCACGAGGTCAGGAGCCGG..........................................................................271.000.001.00-----------------------------
..............................................................................................................................CCCAGCACTTTGGGAGGCCAAGGCGGGCGTCG............................................................................................321.000.00------1.00-----------------------
................................................................................................................................................................CGAGGTCAGGAGATGGAGACTCTG..................................................................241.000.00-------------1.00----------------
.......................................................................................................................................................................AGGAGATGGAGACCATCCGGCT.............................................................221.000.00-1.00----------------------------
...............................................................................................................................................................ACGAGGTCAGGAGATGGAGACCATCCCTGC.............................................................301.000.00-1.00----------------------------
........................................................................................................................................TGGGAGGCCAAGGCGGGCGGAGGAA.........................................................................................251.000.00-1.00----------------------------
................................................................................................TGGCCGGGCGCAGTGGCTCACGCCGCG...............................................................................................................................271.000.00-1.00----------------------------
........................................................................................................................................TGGGAGGCCAAGGCGGGCGGAGCGC.........................................................................................251.000.001.00-----------------------------
...................................................................................AAATAAGAGTTCTTGATC.....................................................................................................................................................181.000.00-------------------1.00----------
.............................................................................................TCTTGGCCGGGCGCAGTGGCTCTG.....................................................................................................................................241.000.00--------------------------1.00---
........................................................................................................................................TGGGAGGCCAAGGCGGGCGGCGTG..........................................................................................241.000.00-1.00----------------------------
.................................................................................................................................................................................................ACGGTGAAACCTTGTCTCTACTGG.................................241.000.001.00-----------------------------
........................................................................................AGAGTTCTTGGCCGG...................................................................................................................................................1560.170.17-----------------------------0.17

Antisense strand
TGGTCACCCTGGGAATTTCCCTCTTAACAAAACCCATTCCTGATGTACATGTGAGTGATGAGTAATGAATACATGCTAATTTTAAATAAGAGTTCTTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGTTAACACGGTGAAACCTTGTCTCTACTAAAAATACAAAAAATTAGCTGGGTGTGGTGGTGGG
..............................................................................................(((((((.......((((.((.(((((((..((((((....)))))).......)))))))))))))..)))))))................................................................................
..............................................................................................95...............................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR029129(GSM416758)
SW480. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
TAX577579(Rovira)
total RNA. (breast)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................CCGGGCGCAGTGGCTCACGCCTGTGCGG........................................................................................................................... 284.000.003.001.00----------------------------
........................................................................................AGAGTTCTTGGCCGGGCG................................................................................................................................................ 183.000.00----3.00-------------------------
...................................................................................................CCGGGCGCAGTGGCTCACGCCTGTGCAC........................................................................................................................... 282.000.002.00-----------------------------
...................................................................................................................................CACTTTGGGAGGCCAAGGCGGGCGGAGGG.......................................................................................... 291.000.001.00-----------------------------
...................................................................................................CCGGGCGCAGTGGCTCACGCCTGTGTAG........................................................................................................................... 281.000.001.00-----------------------------
.................................................................................................................................................................................................................................AAAATTAGCTGGGTGTGGTGGTGGGCGTG 291.000.001.00-----------------------------
............................................................................................................................................AGGCCAAGGCGGGCGGATCACGAGGTACT................................................................................. 291.000.001.00-----------------------------
.............................................................................................................................................GGCCAAGGCGGGCGGATCACGAGGTCACCCA.............................................................................. 311.000.001.00-----------------------------
.............................................................................................................................................GGCCAAGGCGGGCGGATCACTGC...................................................................................... 231.000.001.00-----------------------------
.....................................................................................................................................................CGGGCGGATCACGAGGTCAGACTC............................................................................. 241.000.00--------------------1.00---------
.....................................................................................................................................................................TCAGGAGATGGAGACCATCCTGGTTTA.......................................................... 271.000.00----------1.00-------------------
..................................................................................................................................GCACTTTGGGAGGCCAAGGCGGGCGGATCGGC........................................................................................ 321.000.001.00-----------------------------
........................................................................................AGAGTTCTTGGCCGGGCGCG.............................................................................................................................................. 201.000.00------------1.00-----------------
...................................................................................................CCGGGCGCAGTGGCTCACGCCTGTAGCGG.......................................................................................................................... 291.000.001.00-----------------------------
.....................................................................................................................................................................................................TGAAACCTTGTCTCTATAC.................................. 191.000.00----------------1.00-------------
....................................................................................................CGGGCGCAGTGGCTCACGCCTGTTCAC........................................................................................................................... 271.000.001.00-----------------------------
................................................................................................................................................................CGAGGTCAGGAGATGGAGAGATC................................................................... 231.000.001.00-----------------------------
...................................................................................................................................................................................CCATCCTGGTTAACACGGTGAACCCA............................................. 261.000.00-1.00----------------------------
.....GGGAAATTCCCAGGGT..................................................................................................................................................................................................................................... 1630.330.33----------------------------0.33-