ID: uc003adf.1_intron_0_0_chr22_27068951_f.5p
GENE: AK026502(1)
chr22:27068901-27069150+


(1)
AGO2.ip 		(11)
B-CELL 		(5)
BRAIN 		(7)
BREAST 		(31)
CELL-LINE 		(13)
CERVIX 		(5)
HEART 		(3)
HELA 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(25)
SKIN 		(1)
XRN.ip

Sense strand
AGAGAGCCGTCTCCCCTCTCTGGAGCCGAGAGAGGCCGGTTTCCCCCACCGTAAGTAGACGTGGGGCCGTGACCGGAAGTCCTTGGGAAAGATCCGTCCCATTCCCGGAAGCTAGAGGGCGTTAGTTGTCGGGTTGAAAAGGGGTGTGGGGAGGGGAAGCAGCTTTACCCCGGGCTCGGAGTTTGCAGGAGAGAGAAGTGGGGAGCAAGAAGTGAACCTCAGGGGCTCACAGGGTTCCCGCAGATGCTCA
.........................................................................................................................((..((.((..((.((....((((.(((((..(((......)))..))))).))))....)).))..)).))..)).....................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532884(GSM532884)
G871T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		TAX577590(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038860(GSM458543)
MM426. (cell line)		GSM532887(GSM532887)
G761N. (cervix)		SRR040024(GSM532909)
G613N. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
...............................................................................................................................................................................TCGGAGTTTGCAGGAGAG.........................................................1815.005.00------1.00---------------2.00---------------------------------------------1.00-------------------1.00------------------
......................................................................................................................................................................................TTGCAGGAGAGAGAAGTGG.................................................1914.004.00-2.00--------------1.00-------------------1.00----------------------------------------------------------------------
.......................................................................................................................................................................................................GGGGAGCAAGAAGTGAACCTCAGGGGC........................2714.004.00--4.00--------------------------------------------------------------------------------------------------------
............................................................................................................................GTTGTCGGGTTGAAAAGGGG..........................................................................................................2013.003.00---------------------------------------1.00-----------------1.00---------------------1.00---------------------------
......................................................................................................................................................................................TTGCAGGAGAGAGAAGTG..................................................1833.003.00-------0.33-----------------1.00----------0.33--------------------------------------------------------------0.330.330.330.33----
..............................................................................................................................................................................CTCGGAGTTTGCAGGAGAG.........................................................1912.002.00--------------2.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACCCCGGGCTCGGAGT....................................................................1912.002.00--------2.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................CGGAGTTTGCAGGAGAGAGA......................................................2012.002.00----------------2.00------------------------------------------------------------------------------------------
.................................................CGTAAGTAGACGTGGGGCCG.....................................................................................................................................................................................2012.002.00--2.00--------------------------------------------------------------------------------------------------------
.................................................................................CTTGGGAAAGATCCGTCCC......................................................................................................................................................1912.002.00------------2.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................TCGGAGTTTGCAGGAGAGAG.......................................................2012.002.00-----------------1.00--------1.00--------------------------------------------------------------------------------
.........................................................................................................................................................................CCGGGCTCGGAGTTTGCAGGAGAGA........................................................2512.002.00----------2.00------------------------------------------------------------------------------------------------
.............................................................................................................................TTGTCGGGTTGAAAAGGGGTG........................................................................................................2112.002.00-------------------1.00------------------------------------------------------------------------1.00--------------
.............................................CCACCGTAAGTAGACGTG...........................................................................................................................................................................................1812.002.00-------------------------------2.00---------------------------------------------------------------------------
.........................................................................................................................................AAAGGGGTGTGGGGAGGGGGGTG..........................................................................................232.000.00------------------------------2.00----------------------------------------------------------------------------
.......................................................................................................................................GAAAAGGGGTGTGGGGAGGGGAAG...........................................................................................2412.002.00---------------1.00--------------------------------------------1.00----------------------------------------------
................................................................................................................................................................................................GAGAAGTGGGGAGCAAGA........................................1812.002.00-----------------------------2.00-----------------------------------------------------------------------------
..........................................................................................................................................AAGGGGTGTGGGGAGGGA..............................................................................................182.000.00----2.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................................ACCCCGGGCTCGGAGTTTGCAGGAGAGAGAAGTG..................................................3412.002.00-2.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AGTGAACCTCAGGGGCTCA.....................1912.002.00------2.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CGGGCTCGGAGTTTGCAGGAG...........................................................2112.002.00-------------------1.00------------1.00--------------------------------------------------------------------------
.........................................................................................................CGGAAGCTAGAGGGCGTT...............................................................................................................................1812.002.00-----------2.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................CCGGGCTCGGAGTTTGCAGGAGA..........................................................2312.002.001.00---------------------------------------------------------------------------------1.00------------------------
......................................................................................................................................TGAAAAGGGGTGTGGGGAGGGGAA............................................................................................2412.002.001.00------------------------------------------------------1.00---------------------------------------------------
....................................................................................................................................................................................................AGTGGGGAGCAAGAAGTG....................................1812.002.001.00---1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TTTACCCCGGGCTCGGAG.....................................................................1812.002.00--------------------2.00--------------------------------------------------------------------------------------
.......................................................................................................................................GAAAAGGGGTGTGGGGAGGGGAA............................................................................................2312.002.00----------------------------------2.00------------------------------------------------------------------------
......................................................................................................................................TGAAAAGGGGTGTGGGGAGGGG..............................................................................................2212.002.002.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................GAAGTGGGGAGCAAGAAGTGAA..................................2212.002.00----------------------------2.00------------------------------------------------------------------------------
................................................................................................................................TCGGGTTGAAAAGGGGTG........................................................................................................1812.002.00-----------------------------------------------1.00--1.00--------------------------------------------------------
..........................................................................................................................................AAGGGGTGTGGGGAGGGGA.............................................................................................1921.501.50-----------------------------------------------------------------------------------------------0.500.50-0.50--------
........................................................................................................................................AAAAGGGGTGTGGGGAGG................................................................................................1821.501.50-----------------------------------1.50-----------------------------------------------------------------------
...............................................................................................................................GTCGGGTTGAAAAGGGG..........................................................................................................1721.501.50--0.50-1.00------------------------------------------------------------------------------------------------------
..................TCTGGAGCCGAGAGAGGCCGG...................................................................................................................................................................................................................2111.001.00----1.00------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CTCGGAGTTTGCAGGAGAGAGAAG....................................................2411.001.00-----------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................GGGTGTGGGGAGGGGAAGCA.........................................................................................2011.001.00------------------------------------------------------1.00----------------------------------------------------
..............................................CACCGTAAGTAGACGTG...........................................................................................................................................................................................1711.001.00------------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................................................CCGGGCTCGGAGTTTGCAGTAGA..........................................................231.000.00---------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................GCTCGGAGTTTGCAGGAGAG.........................................................2011.001.00------------------------------------------------------------------1.00----------------------------------------
.......................................................................................................................................GAAAAGGGGTGTGGGGAGGGTAG............................................................................................231.000.00-----------------------1.00-----------------------------------------------------------------------------------
...........................................................................GAAGTCCTTGGGAAAGATCCGTCC.......................................................................................................................................................2411.001.00-----1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AAGAAGTGAACCTCAGGGGC........................2011.001.00--------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................................................................................AGCAAGAAGTGAACCTCAGGGGCT.......................2411.001.00-----1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................GCTCGGAGTTTGCAGGAGAGAGAAG....................................................2511.001.00--------------1.00--------------------------------------------------------------------------------------------
......................................................................................................................................TGAAAAGGGGTGTGGGGAGGGGAAGC..........................................................................................2611.001.00----------------------------------------------------------------------1.00------------------------------------
.........................................................................................................................................................................CCGGGCTCGGAGTTTGCAGGAGAGAGAAG....................................................2911.001.00-------------------------------------------1.00---------------------------------------------------------------
........................................................................................................................................................................CCCGGGCTCGGAGTTTGCAG..............................................................2011.001.001.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TTGCAGGAGAGAGAAGTGGGGAGCAAGAAGT.....................................3111.001.00------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................GGCGTTAGTTGTCGGGTTGAAAA..............................................................................................................2311.001.00---------------------------------------------------------------------------------------1.00-------------------
.................................................................................................................AGAGGGCGTTAGTTGTCGG......................................................................................................................1911.001.00----------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................TTTACCCCGGGCTCGGAGTTTGCAGGAGAG.........................................................3011.001.00-----------------------------------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................................GAAGTGGGGAGCAAGAAG......................................1811.001.00---------------------------------------------------------------------1.00-------------------------------------
........................................................................................................................................................................................GCAGGAGAGAGAAGTGGGGAGCAAG.........................................2511.001.00-------------------------1.00---------------------------------------------------------------------------------
........................................................AGACGTGGGGCCGTGAC.................................................................................................................................................................................1711.001.00-1.00---------------------------------------------------------------------------------------------------------
.................CTCTGGAGCCGAGAGAGGC......................................................................................................................................................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................GCTCGGAGTTTGCAGGCGAG.........................................................201.000.00---------------------------------------------------------------------------1.00-------------------------------
...............CTCTCTGGAGCCGAGAGAGGCCGGT..................................................................................................................................................................................................................2511.001.00--------------------------------1.00--------------------------------------------------------------------------
................................................................................................................................................................................CGGAGTTTGCAGGAGTT.........................................................171.000.00----------------------------------------------------1.00------------------------------------------------------
................................................................................................................................................................................CGGAGTTTGCAGGAGAGAGAAGTG..................................................2411.001.00-------1.00---------------------------------------------------------------------------------------------------
...............................................................................................................................GTCGGGTTGAAAAGGGGT.........................................................................................................1811.001.00-------------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................TTGCAGGAGAGAGAAGTGGG................................................2011.001.00----1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................TAGTTGTCGGGTTGAAAAGGGG..........................................................................................................2211.001.00--1.00--------------------------------------------------------------------------------------------------------
....................................................AAGTAGACGTGGGGCCG.....................................................................................................................................................................................1711.001.00-----1.00-----------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CTCGGAGTTTGCAGGAGAGAGAA.....................................................2311.001.00-------------------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................CCGGGCTCGGAGTTTGCAGGAGAGAGAAGT...................................................3011.001.00---1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GGGCTCGGAGTTTGCAGGA............................................................1911.001.00------------------------------------------------------------------------1.00----------------------------------
..............................................................................................................................................................................................GAGAGAAGTGGGGAGCAAGA........................................2011.001.001.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................TGTCGGGTTGAAAAGGGGTGTGGGGAGGG...............................................................................................2911.001.001.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGAACCTCAGGGGCTCACAGGG................2211.001.00---------------------------------------------------------------------------------1.00-------------------------
.....................................................................................................................................................................TACCCCGGGCTCGGAGTT...................................................................1811.001.00-----------------1.00-----------------------------------------------------------------------------------------
........................................................................................................................................AAAAGGGGTGTGGGGAGGGGAAG...........................................................................................2311.001.00--------------------------------------------------------------------------1.00--------------------------------
.................................................CGTAAGTAGACGTGGGGC.......................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------------------1.00----------------
...................................................................................................................................................................TTTACCCCGGGCTCGGAGTT...................................................................2011.001.00------------------1.00----------------------------------------------------------------------------------------
......................................................................................................................................TGAAAAGGGGTGTGGGGAGGGGAAG...........................................................................................2511.001.00-------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................TTGTCGGGTTGAAAAGGGGTGTG......................................................................................................2311.001.00--------------------------------------------------------1.00--------------------------------------------------
................................................................................................TCCCATTCCCGGAAGCTAGAGGGCGTTAG.............................................................................................................................2911.001.00-----------------1.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................CCCGGGCTCGGAGTTTGCAGGAG...........................................................2311.001.00---------1.00-------------------------------------------------------------------------------------------------
.......................................................................................................CCCGGAAGCTAGAGGGCGTTA..............................................................................................................................2111.001.00------------------------------------------1.00----------------------------------------------------------------
...............................................................................................................CTAGAGGGCGTTAGTTGTCGGGT....................................................................................................................2311.001.00-----------------------------------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................CGGGCTCGGAGTTTGCAGGAGAGAGAAGTG..................................................3011.001.00---1.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................................................TTACCCCGGGCTCGGAGTTTGCAGGAGAGAGA......................................................3211.001.00---1.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................AAAGGGGTGTGGGGAGGGGAA............................................................................................2111.001.00---------------------------------------------1.00-------------------------------------------------------------
........................................................................................................................................................................CCCGGGCTCGGAGTTTGCAGGAGAG.........................................................2511.001.00--------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................................................AGGGGTGTGGGGAGGTGTT............................................................................................191.000.00-----1.00-----------------------------------------------------------------------------------------------------
...............................................ACCGTAAGTAGACGTGGGGCCGTGAC.................................................................................................................................................................................2611.001.00-1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CGGGCTCGGAGTTTGCAGG.............................................................1911.001.00---1.00-------------------------------------------------------------------------------------------------------
...............CTCTCTGGAGCCGAGAGAG........................................................................................................................................................................................................................1911.001.00-----------------------------------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................GGGCTCGGAGTTTGCAGGAGAGA........................................................2311.001.00--------------------------------------------1.00--------------------------------------------------------------
...............................................................................................................................GTCGGGTTGAAAAGGGGTG........................................................................................................1911.001.00---------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................CTTTACCCCGGGCTCGGAGTTTGCAGGAGAGAG.......................................................3311.001.00----------1.00------------------------------------------------------------------------------------------------
.........................................................................................................CGGAAGCTAGAGGGCCATT..............................................................................................................................191.000.00-----------1.00-----------------------------------------------------------------------------------------------
..................................................GTAAGTAGACGTGGGGCCGTGAC.................................................................................................................................................................................2311.001.00---1.00-------------------------------------------------------------------------------------------------------
.........TCTCCCCTCTCTGGAGCCGAGAGA.........................................................................................................................................................................................................................2411.001.00-------------------------------------1.00---------------------------------------------------------------------
........................................................................................................CCGGAAGCTAGAGGGCGTT...............................................................................................................................1911.001.00------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................GGCGTTAGTTGTCGGGTT...................................................................................................................1811.001.00--------------------------------------------------------------------------------1.00--------------------------
..................................................................................................................................................................CTTTACCCCGGGCTCGGAGT....................................................................2011.001.00--------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................GGTTGAAAAGGGGTGTGG.....................................................................................................1811.001.00-------------------------------------------------------------------------1.00---------------------------------
..........................................................................................................................................................................CGGGCTCGGAGTTTGCAGGA............................................................2011.001.00---------------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................TTGTCGGGTTGAAAAGGGG..........................................................................................................1911.001.00---------------1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................................................CTCGGAGTTTGCAGGAGAGAG.......................................................2111.001.00-------------------------------------------------------------------------------------------1.00---------------
...................................................................................................................AGGGCGTTAGTTGTCGGGT....................................................................................................................1911.001.00--------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................................................................CCCGGGCTCGGAGTTTGC................................................................1811.001.00------------1.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAGTGAACCTCAGGGGCTCA.....................2011.001.00---------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................................................GGGCTCGGAGTTTGCAGGAG...........................................................2011.001.00-----------------------------------------------------------------------------1.00-----------------------------
..................................................GTAAGTAGACGTGGGGCCGTGACCGGAAGTCC........................................................................................................................................................................3211.001.00---1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGGGGTGTGGGGAGGGTT.............................................................................................191.000.00------------------1.00----------------------------------------------------------------------------------------
...........................................................................................................................................AGGGGTGTGGGGAGGGGACC...........................................................................................201.000.00--------------------------------------------------------------1.00--------------------------------------------
..............................................................................................................................................................................CTCGGAGTTTGCAGGAG...........................................................1711.001.00----------------------------------------------1.00------------------------------------------------------------
......................................................................................................................................TGAAAAGGGGTGTGGGGAGGGGAAGA..........................................................................................2611.001.00----------------------------------------1.00------------------------------------------------------------------
......................................................................................................................GCGTTAGTTGTCGGGTTGAAAAGGGGTGTG......................................................................................................3011.001.00---------1.00-------------------------------------------------------------------------------------------------
..................................GCCGGTTTCCCCCACCGTAAGTAGACGTGGGGCC......................................................................................................................................................................................3411.001.00------------------------------------------------------------------------------------1.00----------------------
.................................................................................................................................................................GCTTTACCCCGGGCTCGGAGTTTG.................................................................2411.001.00-----------------------------------------------------------------------------------------1.00-----------------
.........................................TCCCCCACCGTAAGTAGACG.............................................................................................................................................................................................2011.001.00-------------------------------------------------------------1.00---------------------------------------------
.........................................................................................................................................................................CCGGGCTCGGAGTTTGCAGGAGAG.........................................................2411.001.00-----------------------------------------------------------------------------------1.00-----------------------
..........................................................................................................................................AAGGGGTGTGGGGAGGGGAAG...........................................................................................2111.001.00-------------1.00---------------------------------------------------------------------------------------------
..........................................................................................................................................................................CGGGCTCGGAGTTTGCAGGAGAGAGA......................................................2611.001.00---1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................AAGGGGTGTGGGGAGGGG..............................................................................................1850.600.600.20-------------------------------------------------------------------------------------------------------0.20-0.20
........................................................................................................................................................................................GCAGGAGAGAGAAGTGGGGA..............................................2020.500.50---------------------------------------------------------------------------------------------0.50-------------
.........................................................................................................................................................................................CAGGAGAGAGAAGTGGGGAG.............................................2020.500.50----------------------------------------------------------------------------------------------0.50------------
....................................................................................................................................................................................GTTTGCAGGAGAGAGAAG....................................................1820.500.50-------------------------------------------------------------------------------------------------0.50---------
............................................................................................................................................GGGGTGTGGGGAGGGGAA............................................................................................1840.250.25-------------------------------------------------------------------------------------------------------0.25---
.....................................................................................................................................................................................TTTGCAGGAGAGAGAAG....................................................1750.200.20-------------------------------------0.20---------------------------------------------------------------------
.................................................................................................................................................GTGGGGAGGGGAAGCAGC.......................................................................................1850.200.20---------------------------------------------------------------------------------------------------------0.20-

Antisense strand
AGAGAGCCGTCTCCCCTCTCTGGAGCCGAGAGAGGCCGGTTTCCCCCACCGTAAGTAGACGTGGGGCCGTGACCGGAAGTCCTTGGGAAAGATCCGTCCCATTCCCGGAAGCTAGAGGGCGTTAGTTGTCGGGTTGAAAAGGGGTGTGGGGAGGGGAAGCAGCTTTACCCCGGGCTCGGAGTTTGCAGGAGAGAGAAGTGGGGAGCAAGAAGTGAACCTCAGGGGCTCACAGGGTTCCCGCAGATGCTCA
.........................................................................................................................((..((.((..((.((....((((.(((((..(((......)))..))))).))))....)).))..)).))..)).....................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR040007(GSM532892)
G601T. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532884(GSM532884)
G871T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR040008(GSM532893)
G727N. (cervix)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		TAX577590(Rovira)
total RNA. (breast)		SRR038859(GSM458542)
MM386. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR029125(GSM416754)
U2OS. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040030(GSM532915)
G013N. (cervix)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038860(GSM458543)
MM426. (cell line)		GSM532887(GSM532887)
G761N. (cervix)		SRR040024(GSM532909)
G613N. (cervix)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
........................................................................CGGATCTTTCCCAAGGACTTCCGG.......................................................................................................................................................... 2413.003.00---------------------------------2.00-------------------------------------1.00-----------------------------------
.........GGCTCCAGAGAGGGGAGA............................................................................................................................................................................................................................... 1812.002.00---------------------------------------------------------------1.001.00------------------------------------------
............................................GTCTACTTACGGTGGG.............................................................................................................................................................................................. 1611.001.00-------1.00---------------------------------------------------------------------------------------------------
..................................ACGGTGGGGGAAACCGGC...................................................................................................................................................................................................... 1811.001.00-------------------------------------------------------------------------------------1.00---------------------
.......CGGCTCCAGAGAGGGGAGACG.............................................................................................................................................................................................................................. 2111.001.00---------------------------1.00-------------------------------------------------------------------------------
..TCCAGAGAGGGGAGACGGCTCT.................................................................................................................................................................................................................................. 2211.001.00-------------1.00---------------------------------------------------------------------------------------------
.............CTCGGCTCCAGAGAGGG............................................................................................................................................................................................................................ 1711.001.00-1.00---------------------------------------------------------------------------------------------------------
......CGGCTCCAGAGAGGGGAGACGG.............................................................................................................................................................................................................................. 2211.001.00-----------------------------------------------------1.00-----------------------------------------------------
......GGCTCCAGAGAGGGGAGACGG............................................................................................................................................................................................................................... 2111.001.00------------------------------------------------1.00----------------------------------------------------------
................................................CGGCCCCACGTCTACTTACGG..................................................................................................................................................................................... 2111.001.00----------------------------------------------------------------------------1.00------------------------------
.....................................................................................................................................................................................................CCCCTGAGGTTCACTTCTTGCTCCCCAC......................... 2811.001.00-------------1.00---------------------------------------------------------------------------------------------
............CCCCTCTCTGGAGCCGATG........................................................................................................................................................................................................................... 191.000.00---------------------1.00-------------------------------------------------------------------------------------
..................................................................CCGTGACCGGAAGTCATG...................................................................................................................................................................... 181.000.00-----1.00-----------------------------------------------------------------------------------------------------
..........TCGGCTCCAGAGAGGGGAG............................................................................................................................................................................................................................. 1911.001.00---------------------1.00-------------------------------------------------------------------------------------