ID: uc002zif.2_intron_9_0_chr21_47570440_r.5p
GENE: (5)
chr21:47571272-47571521-


(1)
AGO2.ip
(2)
B-CELL
(2)
BREAST
(10)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(2)
HEART
(12)
LIVER
(3)
OTHER
(5)
SKIN
(1)
TESTES

Sense strand
CCCACCGCATCGCGCTCAACCTGCGGGAGCAGGGCCGCGGGAAGGACCAGGTGACCCCGTTCACTGACCCCATGGAGCCCCACCCAGCCCCTCGGGAAAGGGTTAGAGGCTGAGAGCCTCAGGCGGGGAGGTCGGTGGGGATGGGGCACCGGCCGGACAGGGTTCGGCCTCCCACCTGCAGACCGGCCCAGCCTCCGCGTCCACACCGTGCGGGGACCGCGCAGGTCGGCAGGTCAGGGGCGGAGTGAAG
...........................................................((((((((((((.....(((..((((..(((...)))...))))..(((((.....))))).)))..)).))))))))))..((((((...((((((.((((....((....)).))))....))))))..))).))).....................................................
.........................................................58............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR343335SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343337SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCG.....................................................21114.0014.002.001.00-1.001.00-1.00-1.00-3.00-----1.00--------1.00----1.00---1.00-------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGC....................................................2219.009.00---1.00--2.00--3.00--1.00--------------1.00----1.00---------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGCT...................................................2318.009.001.001.002.00-2.001.00-1.00----------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTC.......................................................1914.004.00---4.00--------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGA....................................................2214.0014.002.00---1.00-------------1.00-----------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGCAAT.................................................2513.009.00--3.00---------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCC......................................................2013.003.00---2.00--1.00-----------------------------------
.......................................GGAAGGACCAGGTGACCCCGTT.............................................................................................................................................................................................2212.002.00-----2.00------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGCAT..................................................2412.009.001.00-----------1.00-----------------------------
................................................................................................................................................................................................................TGCGGGGACCGCGCAGGTCGGC....................2212.002.00-----------2.00------------------------------
.............................................................................................................................................................................ACCTGCAGACCGGCCCAGCCTCCGCGT..................................................2711.001.00-------1.00----------------------------------
........................................................................................................................................................................CTCCCACCTGCAGACCGGCCCAG...........................................................2311.001.00-1.00----------------------------------------
................................................................................................................................................................................................................TGCGGGGACCGCGCAGGTCGGG....................221.000.001.00-----------------------------------------
..................................................................................................................................................................................CAGACCGGCCCAGCCTCCGCG...................................................2111.001.00--------1.00---------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCTAAA...................................................2311.004.00---------------------1.00--------------------
..............................................................ACTGACCCCATGGAGCCCCA........................................................................................................................................................................2011.001.00-1.00----------------------------------------
.................................................................................................AAGGGTTAGAGGCTGATGGT.....................................................................................................................................201.000.00---------------------------------1.00--------
................................................................................................................................................................................TGCAGACCGGCCCAGCTT........................................................181.000.00--1.00---------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTAA......................................................201.000.001.00-----------------------------------------
..........................................................................................................AGGCTGAGAGCCTCAGGCGGGGAG........................................................................................................................2411.001.00-1.00----------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGCA...................................................2311.009.00--1.00---------------------------------------
.................................................................................................................................................................................GCAGACCGGCCCAGCCTCCGCAT..................................................231.000.00-------1.00----------------------------------
...............................................................................................................................GAGGTCGGTGGGGATGGGGCA......................................................................................................2111.001.00-----------------------------------1.00------
.....................................CGGGAAGGACCAGGTGACCC.................................................................................................................................................................................................2011.001.00----1.00-------------------------------------
..................................CCGCGGGAAGGACCAGGTGAC...................................................................................................................................................................................................2111.001.00------------------------------------1.00-----
.........................................................................................CCTCGGGAAAGGGTTAGAGGCT...........................................................................................................................................2211.001.00-----1.00------------------------------------
...............................................................................................................................................................................................................GTGCGGGGACCGCGCAGGTCGGCAGGT................2711.001.00-1.00----------------------------------------
..............................................................................................................................GGAGGTCGGTGGGGACGGG.........................................................................................................191.000.00--------------1.00---------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGCTAA.................................................2511.009.001.00-----------------------------------------
.............................................................................................................................................................................................................CCGTGCGGGGACCGCGCAGGTCGGC....................2511.001.00----------------------1.00-------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGCTT..................................................2411.009.00--------1.00---------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCCGAA...................................................2311.0014.00-1.00----------------------------------------
....................................................................................................................................................................................................................................GCAGGTCAGGGGCGGAGTGAAG2211.001.00-1.00----------------------------------------
...................................................................................................................................................................................AGACCGGCCCAGCCTCCGCGTCCACAC............................................2711.001.00-1.00----------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCT......................................................2011.004.00----1.00-------------------------------------
.....................................CGGGAAGGACCAGGTGAC...................................................................................................................................................................................................1811.001.00-----1.00------------------------------------
...................................................................................................................................................................................................................GGGGACCGCGCAGGTCGGCAGG.................2211.001.00-----------------1.00------------------------
...........................................................................................TCGGGAAAGGGTTAGAGGCTGAGA.......................................................................................................................................2411.001.00-------------------1.00----------------------
............................................................................................................................................................................CACCTGCAGACCGGCCCAGCCTCCGCGT..................................................2811.001.00-1.00----------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCTCTGC....................................................2211.004.00----1.00-------------------------------------
................................................................................................................................................................................TGCAGACCGGCCCAGCCAAAA.....................................................211.000.001.00-----------------------------------------
..................................................................................................................................GTCGGTGGGGATGGGGCACG....................................................................................................201.000.00-------------1.00----------------------------
..............................................................................................................................................................................................................................AGGTCGGCAGGTCAGCATC.........191.000.00--------------------------1.00---------------
......................................................................................GCCCCTCGGGAAAGGGTTAGAG..............................................................................................................................................2211.001.00--1.00---------------------------------------
................................................................................................................................................................................................CTCCGCGTCCACACC...........................................1520.500.50-------------------------------------0.50----
............................................................................................................................................................................CACCTGCAGACCGGC...............................................................1540.250.25--------------------------------------0.25---
....................................................................................................................................CGGTGGGGATGGGGC.......................................................................................................1560.170.17---------------------------------------0.17--
....................................................................................................................................CGGTGGGGATGGGGCGA.....................................................................................................1760.170.17-------------0.17----------------------------
....................................................................................................................................CGGTGGGGATGGGGCGG.....................................................................................................1760.170.17----------------------------------------0.17-

Antisense strand
CCCACCGCATCGCGCTCAACCTGCGGGAGCAGGGCCGCGGGAAGGACCAGGTGACCCCGTTCACTGACCCCATGGAGCCCCACCCAGCCCCTCGGGAAAGGGTTAGAGGCTGAGAGCCTCAGGCGGGGAGGTCGGTGGGGATGGGGCACCGGCCGGACAGGGTTCGGCCTCCCACCTGCAGACCGGCCCAGCCTCCGCGTCCACACCGTGCGGGGACCGCGCAGGTCGGCAGGTCAGGGGCGGAGTGAAG
...........................................................((((((((((((.....(((..((((..(((...)))...))))..(((((.....))))).)))..)).))))))))))..((((((...((((((.((((....((....)).))))....))))))..))).))).....................................................
.........................................................58............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM359211(GSM359211)
hepg2_biotin_hl_2a. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM359212(GSM359212)
hepg2_biotin_hl_2b. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR343335SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343337SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
................................................................TGACCCCATGGAGCCAGA........................................................................................................................................................................ 181.000.00-----------------------1.00------------------
......................................................CCCCGTTCACTGACCGACT................................................................................................................................................................................. 191.000.00---------------1.00--------------------------
........................................................................................................................................................................CTCCCACCTGCAGACCGA................................................................ 181.000.00------------------------1.00-----------------
......................................................................................................................................................................................CCGGCCCAGCCTCCGGAG.................................................. 181.000.00-------------------------------1.00----------
..............................................................................................................................................................................................GCCTCCGCGTCCACAAGAA......................................... 191.000.00--------------------1.00---------------------
......................................................................................................................................................................CGGTCTGCAGGTGGGAGGC................................................................. 1911.001.00----------------------------1.00-------------
.......................................................CCCGTTCACTGACCCATGT................................................................................................................................................................................ 191.000.00-----------------------------1.00------------
......................................................................................................................................................................TCTGCAGGTGGGAGGC.................................................................... 1670.140.14-----------------------------------------0.14