ID: uc002zhf.2_intron_0_0_chr21_46708160_f.5p
GENE: (1)
chr21:46708110-46708359+


(4)
B-CELL
(2)
BRAIN
(9)
BREAST
(10)
CELL-LINE
(9)
CERVIX
(5)
HEART
(2)
OTHER
(33)
SKIN
(1)
TESTES

Sense strand
GGAGGTCCCGGGGTCGGGAAGTCGGTGGACCCTGCAGGCCAGTGGGGAGGGTACGCGAGACTGGGGGCCGGGAGGGCTGACGGCTGGTGGCGCGGGGCGGGTCCGTGGGGAGGAGGCCCGGGGCTGGTAGGGGCGGGAGGGCTGGACGGCGGGGGCGGGGCGGAGGAGGGGGTCCGTAGACGGGGTCGGCGCCGGGTGCTCTCGCCCCTCTGGAGCTGGGGTCGGGGCGGGAGCCGCGCATGAGAGCCTG
..................................................................................................................................................(((((..(((...(((((........))))).......)))..)))))........................................................
................................................................................................................................................145....................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577744(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR040034(GSM532919)
G001N. (cervix)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM956925PAZD5GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
.....................................................................................................................................................CGGGGGCGGGGCGGACTGT..................................................................................19041.001.006.00-5.002.00--1.002.00-3.00----2.00-1.002.002.00--1.001.001.00-------1.00--1.00--1.001.00-1.00-------1.00-1.001.001.00--------1.00---1.00----1.00--------
.....................................................................................................................................................CGGGGGCGGGGCGGAC.....................................................................................1608.001.00---------------------1.00----1.00-----1.00---1.00----------------1.00---1.001.00-------1.00------------
.....................................................................................................................................................CGGGGGCGGGGCGGACTG...................................................................................1805.001.00-------1.00-----1.00-----1.00--------1.00-------------1.00------------------------------------
...................................................................................................................................................................................ACGGGGTCGGCGCCGACG.....................................................183.000.00-------------------------1.00-------------1.00-------1.00-------------------------------
.....................................................................................................................................................CGGGGGCGGGGCGGACTGG..................................................................................1902.001.00---2.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................GAGCTGGGGTCGGGGCGGGAGCCGCGCACG........302.000.00-2.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGGTCGGGGCGGGAGGG...............172.000.00-------------------1.00-----------------------------------1.00-----------------------
.....................................................................................................................................................CGGGGGCGGGGCGGACT....................................................................................1702.001.00--------------------1.00------------1.00---------------------------------------------
............................................................................................................GGAGGAGGCCCGGGGTA.............................................................................................................................171.000.00---------------------------------------------------------------1.00---------------
.....................................................................................................................................................CGGGGGCGGGGCGGA......................................................................................1501.001.00---------------------------------------------------------------------1.00---------
..........................................................................................................................................................................................................................GGGTCGGGGCGGGAGGGG..............181.000.00------1.00------------------------------------------------------------------------
................................................................................CGGCTGGTGGCGCGGGGCGGGTCCG.................................................................................................................................................2511.001.00-----------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................................GCTGGGGTCGGGGCGGGA..................1811.001.00-------------------------------------------------1.00-----------------------------
............................................................................................................................................................GGGGCGGAGGAGGGGGTATA..........................................................................201.000.00-----------------------------------------1.00-------------------------------------
................................................................................................................GAGGCCCGGGGCTGGTTGG.......................................................................................................................191.000.00---------------------------1.00---------------------------------------------------
...............................................................................ACGGCTGGTGGCGCGGGGCGGGCCCG.................................................................................................................................................261.000.00----1.00--------------------------------------------------------------------------
...................AGTCGGTGGACCCTGGGTC....................................................................................................................................................................................................................191.000.00------------------------------------------------------------------------1.00------
.....................................................................................................................................................................................................................AGCTGGGGTCGGGGCGGGAGCCGCGCACGAG......311.000.00----1.00--------------------------------------------------------------------------
............................................................................................................................................................GGGGCGGAGGAGGGGGTAGA..........................................................................201.000.00-----------1.00-------------------------------------------------------------------
.................................................................................................................AGGCCCGGGGCTGGTGCTG......................................................................................................................191.000.00------------------------------------------------------1.00------------------------
...........................................................................................GCGGGGCGGGTCCGT................................................................................................................................................1511.001.00--------------------------------------------------------------1.00----------------
...........................................................................GCTGACGGCTGGTGGTTTC............................................................................................................................................................191.000.00-------------------------------------------------------------------1.00-----------
...............GGGAAGTCGGTGGACC...........................................................................................................................................................................................................................1611.001.00------------------------1.00------------------------------------------------------
...........................................................................................................................................................................................................................GGTCGGGGCGGGAGCCC..............171.000.00---------------1.00---------------------------------------------------------------
....................................................................................................................................................................................................................GAGCTGGGGTCGGGGCGGGAGCCGCGCCCG........301.000.00-1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGGTCGGGGCGGGAGGCTC.............191.000.00------1.00------------------------------------------------------------------------
...................................................................................................................................................................................ACGGGGTCGGCGCCGAC......................................................171.000.00-----------------------------------------------------------1.00-------------------
.....................................................................................................................................CGGGAGGGCTGGACGGCGGGGGCGGGGCGGAGG....................................................................................3311.001.00----1.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................AGCTGGGGTCGGGGCGGGAGCCGCGCACG........291.000.00----1.00--------------------------------------------------------------------------
......................................................................................................................................................GGGGGCGGGGCGGAGTGTC.................................................................................191.000.00----------------------------------------------1.00--------------------------------
..........................................................................GGCTGACGGCTGGTGGT...............................................................................................................................................................171.000.00----------------------------------------------------------------1.00--------------
...........................................................ACTGGGGGCCGGGAGGC..............................................................................................................................................................................171.000.00----------------1.00--------------------------------------------------------------
..................................................................................................................................................CGGCGGGGGCGGGGCG........................................................................................1601.001.00-------------------------------------------1.00-----------------------------------
...................................................................................................................................................................................ACGGGGTCGGCGCCGACGA....................................................191.000.00-------------1.00-----------------------------------------------------------------
...............................................................................................GGCGGGTCCGTGGGGAATA........................................................................................................................................191.000.00------------------------------1.00------------------------------------------------
......................................................................................................................................................GGGGGCGGGGCGGAGTT...................................................................................171.000.00---------------1.00---------------------------------------------------------------
....................................................................................................................................GCGGGAGGGCTGGACTGGG...................................................................................................191.000.00------------1.00------------------------------------------------------------------
...............................................................................ACGGCTGGTGGCGCGGG..........................................................................................................................................................1721.001.00----------------------0.50--------------------------------------------------0.50-----
....................................................................................................................................................................................................................GAGCTGGGGTCGGGGCGGGAGCCGCGCACGA.......311.000.00-1.00-----------------------------------------------------------------------------
.............TCGGGAAGTCGGTGGTT............................................................................................................................................................................................................................171.000.00-----1.00-------------------------------------------------------------------------
....................................................ACGCGAGACTGGGGGCCGGGAGGGCTGACGG.......................................................................................................................................................................3111.001.00-1.00-----------------------------------------------------------------------------
................................................................................CGGCTGGTGGCGCGGGTTTC......................................................................................................................................................201.000.00-----------------------------------1.00-------------------------------------------
...................................................................................................................................................................................ACGGGGTCGGCGCCGC.......................................................161.000.00--------------------------------------------------------1.00----------------------
...............GGGAAGTCGGTGGACCCTGCAGGC...................................................................................................................................................................................................................2411.001.00------------1.00------------------------------------------------------------------
........................................................................................GGCGCGGGGCGGGTCCGGGGC.............................................................................................................................................211.000.00---------------------------------------------1.00---------------------------------
..................................................................................................................................GGGCGGGAGGGCTGGAAG......................................................................................................181.000.00-----------1.00-------------------------------------------------------------------
..................................................................................................................................................CGGCGGGGGCGGGGCGGA......................................................................................1820.500.50--------------------------------------------------------------------------0.50----
.....................................................................................................................................CGGGAGGGCTGGACGGC....................................................................................................1720.500.50-----------------------0.50-------------------------------------------------------
.......................................................................................................................................GGAGGGCTGGACGGCG...................................................................................................1640.250.25------0.25------------------------------------------------------------------------
...........................................................................................................................................................CGGGGCGGAGGAGGG................................................................................1590.110.11------------------------------------------------------------------------------0.11
..............................................................................................................................GTAGGGGCGGGAGGG.............................................................................................................1590.110.11-----------------------------------------------------------------------------0.11-

Antisense strand
GGAGGTCCCGGGGTCGGGAAGTCGGTGGACCCTGCAGGCCAGTGGGGAGGGTACGCGAGACTGGGGGCCGGGAGGGCTGACGGCTGGTGGCGCGGGGCGGGTCCGTGGGGAGGAGGCCCGGGGCTGGTAGGGGCGGGAGGGCTGGACGGCGGGGGCGGGGCGGAGGAGGGGGTCCGTAGACGGGGTCGGCGCCGGGTGCTCTCGCCCCTCTGGAGCTGGGGTCGGGGCGGGAGCCGCGCATGAGAGCCTG
..................................................................................................................................................(((((..(((...(((((........))))).......)))..)))))........................................................
................................................................................................................................................145....................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
TAX577744(Rovira)
total RNA. (breast)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR040034(GSM532919)
G001N. (cervix)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM956925PAZD5GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532889(GSM532889)
G576N. (cervix)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189783SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
...................................................................................................................................................................................................................GGAGCTGGGGTCGGGGACG.................... 198.000.00-----2.00--2.00-2.00---------1.00--------------------------------------------------1.00-------
...................................................................................................................................................................................................................GGAGCTGGGGTCGGGGCCG.................... 192.000.00--------1.00-1.00--------------------------------------------------------------------
................................................................................................................................................................................................CGGGTGCTCTCGCCCCTG........................................ 181.000.00--------------------------------------------1.00----------------------------------
...........................................................................................................................................................CGGGGCGGAGGAGGGGGC............................................................................. 181.000.00--------------------------------------------------------------------1.00----------
....................................................................................................................................................................................CGGGGTCGGCGCCGGGGGGA.................................................. 201.000.00-----------1.00-------------------------------------------------------------------
...................................................................................................................................................................................................................GGAGCTGGGGTCGGGGGCT.................... 191.000.00-----1.00-------------------------------------------------------------------------
..............................................................................................................................................................................................................CCTCTGGAGCTGGGGCAT.......................... 181.000.00------------------------------------------------------------1.00------------------
...........................................................................................................................................CCCCCGCCGTCCAGCC............................................................................................... 1620.500.50------------0.50------------------------------------------------------------------
.....................................................................................................................................................................................CCCGGCGCCGACCCC...................................................... 1560.170.17---------------------------------------------------------------------------0.17---
.............................................................................................................................CCCTCCCGCCCCTACC............................................................................................................. 1670.140.14----------------------------------------------------------------------------0.14--
...........................................................................................................................................................CCCTCCTCCGCCCCG................................................................................ 1590.110.11------------0.11------------------------------------------------------------------