ID: uc002zdm.3_intron_5_0_chr21_45168962_f.5p
GENE: (6)
chr21:45168912-45169161+


(1)
B-CELL 		(7)
BREAST 		(14)
CELL-LINE 		(1)
HEART 		(1)
LIVER 		(1)
OTHER 		(4)
SKIN 		(1)
UTERUS

Sense strand
AAAGTGGTGCCGCTTGCAGACATTATCACGCCCAACCAGTTTGAGGCCGAGTAAGTCATTTTATTTTATTTTACTTTATTTATTTATTTTTCAAGATGGGTCTCGCTCTTGTCACCCAGGCTGGAGTGCAGTGGCACGATCACAGCTCACTGCAACCTCTGTCTCCGGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATGACAGGCGTGAGCCACCACGCCCGGCTAATTTTTGTAT
.........................................................................................((((...(((((..((....))..)))))...)))).(((((((((.........)).)))))))................................................................................................
.................................................................66........................................................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)
......................................................................TTACTTTATTTATTTATTTTTTCAG...........................................................................................................................................................2545.000.0011.006.0020.00-8.00----------------------------
........................................................................ACTTTATTTATTTATTTTTCG.............................................................................................................................................................2132.000.006.00-21.00-5.00----------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATG......................................................................................................................................................................2610.000.005.003.002.00------------------------------
........................................................CATTTTATTTTATTTTACTTTACTG.........................................................................................................................................................................259.000.002.001.004.00-2.00----------------------------
......................................................................TTACTTTATTTATTTACG..................................................................................................................................................................188.000.003.004.00--1.00----------------------------
............................................................TTATTTTATTTTACTTTATCG.........................................................................................................................................................................218.000.006.001.00--1.00----------------------------
.........................................................................CTTTATTTATTTATTTTTCTAG...........................................................................................................................................................227.000.001.001.002.00-3.00----------------------------
........................................................................ACTTTATTTATTTATTTTTAAG............................................................................................................................................................227.000.003.001.00--3.00----------------------------
.........................................................................CTTTATTTATTTATTTTTCAAG...........................................................................................................................................................2226.506.502.503.000.50-0.50----------------------------
........................................................CATTTTATTTTATTTTACTTTATTTTATG.....................................................................................................................................................................295.000.004.001.00-------------------------------
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGCTAGGGG......315.000.00---4.00-1.00---------------------------
............................................................TTATTTTATTTTACTTTATTTATG......................................................................................................................................................................244.000.004.00--------------------------------
...............................................................TTTTATTTTACTTTATTTATTTATTTTATTG............................................................................................................................................................314.000.00--1.00-3.00----------------------------
...............................................................TTTTATTTTACTTTATTTATTTATTTATG..............................................................................................................................................................294.000.002.001.00----1.00--------------------------
.........................................................ATTTTATTTTATTTTACTTTATCG.........................................................................................................................................................................244.000.003.001.00-------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATG......................................................................................................................................................................274.000.00-2.00-1.001.00----------------------------
...........................................................TTTATTTTATTTTACTTTATTTATG......................................................................................................................................................................254.000.001.003.00-------------------------------
..............................................................ATTTTATTTTACTTTATTTATTTATTTTTG..............................................................................................................................................................304.000.003.00-1.00------------------------------
........................................................CATTTTATTTTATTTTACTTTATTTTG.......................................................................................................................................................................273.000.00-3.00-------------------------------
...................................................................ATTTTACTTTATTTATTTATTTTTTCG............................................................................................................................................................273.000.002.00-1.00------------------------------
........................................................CATTTTATTTTATTTTACTTTATTTTACT.....................................................................................................................................................................293.000.00---3.00-----------------------------
........................................................CATTTTATTTTATTTTACG...............................................................................................................................................................................193.000.002.001.00-------------------------------
.........................................................................CTTTATTTATTTATTTCTTG.............................................................................................................................................................203.000.001.002.00-------------------------------
............................................................TTATTTTATTTTACTTTATTTATTTTTTG.................................................................................................................................................................293.000.002.001.00-------------------------------
........................................................................ACTTTATTTATTTATTTCG...............................................................................................................................................................193.000.003.00--------------------------------
.........................................................................CTTTATTTATTTATTTTTCTAAG..........................................................................................................................................................233.000.00-1.001.00-1.00----------------------------
............................................................................................................TTGTCACCCAGGCTGGAGTGCAGCGGG...................................................................................................................273.000.00---2.00---------------------1.00-------
.............................................................................................................................................................................................................CTGGGATGACAGGCGTGAGCCAAGA....................252.000.00--------2.00------------------------
...................................................................................................................................TGGCACGATCACAGCTCCTTG..................................................................................................212.000.00-----2.00---------------------------
.........................................................................CTTTATTTATTTATTTTTCTGGG..........................................................................................................................................................232.000.00-2.00-------------------------------
........................................................CATTTTATTTTATTTTACTTCATG..........................................................................................................................................................................242.000.002.00--------------------------------
..........................................................................................................TCTTGTCACCCAGGCTGGAGTGCAGTGGGGCA................................................................................................................322.000.00---2.00-----------------------------
..........................................................TTTTATTTTATTTTACTTTATTCTAG......................................................................................................................................................................262.000.00-2.00-------------------------------
..................................................................TATTTTACTTTATTTATTATCA..................................................................................................................................................................222.000.001.001.00-------------------------------
........................................................CATTTTATTTTATTTTACTTTC............................................................................................................................................................................222.000.00-----2.00---------------------------
............................................................................................................TTGTCACCCAGGCTGGAGTGCAGCGCC...................................................................................................................272.000.00---2.00-----------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATTTATG..................................................................................................................................................................302.000.001.001.00-------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTATG.......................................................................................................................................................................262.000.001.00--1.00-----------------------------
........................................................CATTTTATTTTATTTTACTCTA............................................................................................................................................................................222.000.001.001.00-------------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATTTAG...................................................................................................................................................................292.000.001.00---1.00----------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATGTT....................................................................................................................................................................282.000.00-----2.00---------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATATG....................................................................................................................................................................292.000.002.00--------------------------------
....................................................................TTTTACTTTATTTATTTATTTTTCTAAG..........................................................................................................................................................282.000.001.001.00-------------------------------
..........................................................................................................................................................ACCTCTGTCTCCGGGGTTCAGGCG........................................................................242.000.00---2.00-----------------------------
........................................................CATTTTATTTTATTTTACTTTATTTATG......................................................................................................................................................................282.000.00-2.00-------------------------------
...............................................................TTTTATTTTACTTTATTTATTTTATC.................................................................................................................................................................262.000.00---1.00--1.00--------------------------
........................................................CATTTTATTTTATTTTACTTTACTTT........................................................................................................................................................................262.000.00-----2.00---------------------------
........................................................................ACTTTATTTATTTATTTCTTG.............................................................................................................................................................212.000.00--1.00-1.00----------------------------
...............................................................................................................................................AGCTCACTGCAACCTCTGTCTCCGGGGTTC.............................................................................3031.671.67---1.00-0.67---------------------------
...............................................................TTTTATTTTACTTTATTTATTTATTTTTTTAG...........................................................................................................................................................321.000.00-1.00-------------------------------
............................................................................................................TTGTCACCCAGGCTGGAGA...........................................................................................................................191.000.00----------1.00----------------------
.........................................................ATTTTATTTTATTTTACTTTATTAAAG......................................................................................................................................................................271.000.001.00--------------------------------
.AAGTGGTGCCGCTTGCAGA......................................................................................................................................................................................................................................1911.001.00----------------------1.00----------
...............................................................TTTTATTTTACTTTATTTATTTATTTCTAG.............................................................................................................................................................301.000.00-1.00-------------------------------
........................................................CATTTTATTTTATTTTACTTTAGG..........................................................................................................................................................................241.000.00----1.00----------------------------
...............................................................TTTTATTTTACTTTATTTATTTGGG..................................................................................................................................................................251.000.00---1.00-----------------------------
...........................................................................................................................................TCACAGCTCACTGCAACCTCTGTCTCCGGG.................................................................................3011.001.00-----1.00---------------------------
.........................................................................CTTTATTTATTTATTTTTCATTTG.........................................................................................................................................................241.000.001.00--------------------------------
........................................................................................................................................................CAACCTCTGTCTCCGGGGTTCATGCC........................................................................261.000.00---1.00-----------------------------
..........................................................................................................................................................................TTCAAGCAATTCTCCTGCCGGC..........................................................221.000.00---1.00-----------------------------
......................................................................TTACTTTATTTATTTCTTG.................................................................................................................................................................191.000.001.00--------------------------------
..............................................................ATTTTATTTTACTTTATTTATTTTTTG.................................................................................................................................................................271.000.001.00--------------------------------
....................................................................TTTTACTTTATTTATTTATTTCCG..............................................................................................................................................................241.000.00-1.00-------------------------------
........................................................................ACTTTATTTATTTATTTCAAG.............................................................................................................................................................211.000.00-1.00-------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATTTTTA..................................................................................................................................................................311.000.001.00--------------------------------
....................................................................TTTTACTTTATTTATTTATTCATC..............................................................................................................................................................241.000.00-----1.00---------------------------
............................................................................................................TTGTCACCCAGGCTGGAGTGCAGCCA....................................................................................................................261.000.00---1.00-----------------------------
..............................................................................................................................................CAGCTCACTGCAACCTCTGTCTCCGGGCTC..............................................................................301.000.00---1.00-----------------------------
................................................................TTTATTTTACTTTATTTATTCAAA..................................................................................................................................................................241.000.00------1.00--------------------------
.............................................................TATTTTATTTTACTTTATTTATTTATCT.................................................................................................................................................................281.000.00---1.00-----------------------------
...............................................................TTTTATTTTACTTTATTTATTTATTTTTAG.............................................................................................................................................................301.000.00--1.00------------------------------
....................................................................TTTTACTTTATTTATTTATTTTCAG.............................................................................................................................................................251.000.00-1.00-------------------------------
..........................................................TTTTATTTTATTTTACTTTATTCATC......................................................................................................................................................................261.000.00-----1.00---------------------------
..........................................................TTTTATTTTATTTTACTTTCTCG.........................................................................................................................................................................231.000.00-1.00-------------------------------
.................................................................................................................................AGTGGCACGATCACACCCG......................................................................................................191.000.00-------------------1.00-------------
........................................................................ACTTTATTTATTTATTTTACG.............................................................................................................................................................211.000.001.00--------------------------------
........................................................CATTTTATTTTATTTTACTTTACC..........................................................................................................................................................................241.000.00---1.00-----------------------------
.................................................................TTATTTTACTTTATTTATTTTAG..................................................................................................................................................................231.000.00-1.00-------------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATTTATC..................................................................................................................................................................301.000.00---1.00-----------------------------
..............................................................ATTTTATTTTACTTTATTGCAG......................................................................................................................................................................221.000.00-----1.00---------------------------
.............................................................TATTTTATTTTACTTTATTTATTTTTTG.................................................................................................................................................................281.000.001.00--------------------------------
...........................................................TTTATTTTATTTTACTTTATTCTTG......................................................................................................................................................................251.000.00-1.00-------------------------------
...........................................................TTTATTTTATTTTACTTTATTTATTTATTTTTG..............................................................................................................................................................331.000.00-1.00-------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTCTAG......................................................................................................................................................................271.000.00-1.00-------------------------------
.................................AACCAGTTTGAGGCCGAGT......................................................................................................................................................................................................1911.001.00--------------1.00------------------
.........................................................ATTTTATTTTATTTTACTTATTG..........................................................................................................................................................................231.000.00-1.00-------------------------------
.........................................................................CTTTATTTATTTATTTTTCGAG...........................................................................................................................................................221.000.00-1.00-------------------------------
...............................................................TTTTATTTTACTTTATTTATTTCGAG.................................................................................................................................................................261.000.00---1.00-----------------------------
..............................................................ATTTTATTTTACTTTATTTAGAC.....................................................................................................................................................................231.000.00-----1.00---------------------------
..............................................................ATTTTATTTTACTTTATTTATTTTATG.................................................................................................................................................................271.000.00-1.00-------------------------------
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGCTATGC.......301.000.00---1.00-----------------------------
............................................................TTATTTTATTTTACTTTATTTATTTTAG..................................................................................................................................................................281.000.001.00--------------------------------
..........................................................TTTTATTTTATTTTACTTTATTTCATG.....................................................................................................................................................................271.000.001.00--------------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATTTATTA.................................................................................................................................................................311.000.00--1.00------------------------------
.......................................................TCATTTTATTTTATTTTACTTTATC..........................................................................................................................................................................251.000.00---1.00-----------------------------
......................................................................TTACTTTATTTATTTATTTTTCTAAG..........................................................................................................................................................261.000.001.00--------------------------------
...........................................................TTTATTTTATTTTACTTTATTTATTTATG..................................................................................................................................................................291.000.001.00--------------------------------
........................................................................................................................................................................................................AGTAGCTGGGATGACAG.................................1701.001.00-------1.00-------------------------
......................................................................TTACTTTATTTATTTATTTCTG..............................................................................................................................................................221.000.001.00--------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTGCAG.....................................................................................................................................................................281.000.00---1.00-----------------------------
.......................................................................................................................................................................................................................AGGCGTGAGCCACCACGCCCGGCTCGAC.......281.000.00-----1.00---------------------------
........................................................CATTTTATTTTATTTTACTTTATTTTC.......................................................................................................................................................................271.000.00-1.00-------------------------------
...............................................................TTTTATTTTACTTTATTTATTTATTTTAAAG............................................................................................................................................................311.000.001.00--------------------------------
...................................................................ATTTTACTTTATTTATTTATTTTTCAT............................................................................................................................................................271.000.00-1.00-------------------------------
........................................................CATTTTATTTTATTTTACTTTATTATG.......................................................................................................................................................................271.000.001.00--------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATTCG....................................................................................................................................................................291.000.001.00--------------------------------
..............................................................ATTTTATTTTACTTTATTTATTTATTTTTTTAG...........................................................................................................................................................331.000.001.00--------------------------------
...........................................................TTTATTTTATTTTACTTTATTTATTTTTTG.................................................................................................................................................................301.000.00-1.00-------------------------------
............................................................................................................................................................................................................GCTGGGATGACAGGCGTGATTA........................221.000.00-----------------------------1.00---
.......................................................TCATTTTATTTTATTTTACTTGAG...........................................................................................................................................................................241.000.00-----1.00---------------------------
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGCGTTG........291.000.00---1.00-----------------------------
..........................................................TTTTATTTTATTTTACTTTATTTATC......................................................................................................................................................................261.000.00---1.00-----------------------------
..........CGCTTGCAGACATTATCACGCCC.........................................................................................................................................................................................................................2311.001.00---------------------1.00-----------
.........................................................ATTTTATTTTATTTTACTTTATTTCC.......................................................................................................................................................................261.000.00---1.00-----------------------------
.....................................................................................................................AGGCTGGAGTGCAGTGGCACGAGCCA...........................................................................................................261.000.00---1.00-----------------------------
..............................................................ATTTTATTTTACTTTATTTATTTTAAT.................................................................................................................................................................271.000.00---1.00-----------------------------
..............................................................ATTTTATTTTACTTTATTTATTTGAGG.................................................................................................................................................................271.000.00---1.00-----------------------------
................................................................TTTATTTTACTTTATTTATTTATTTATG..............................................................................................................................................................281.000.00-1.00-------------------------------
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGCTAATCTG.....321.000.00-----1.00---------------------------
........................................................CATTTTATTTTATTTTACTTTACT..........................................................................................................................................................................241.000.00--1.00------------------------------
........................................................CATTTTATTTTATTTTACTTTTG...........................................................................................................................................................................231.000.00-1.00-------------------------------
.................................................................TTATTTTACTTTATTTGAGG.....................................................................................................................................................................201.000.00-----1.00---------------------------
.........................................................ATTTTATTTTATTTTACTTTACTGC........................................................................................................................................................................251.000.00---1.00-----------------------------
.................................................................................................................................AGTGGCACGATCACAGCCG......................................................................................................191.000.00------------1.00--------------------
...........................................................TTTATTTTATTTTACTTTCCG..........................................................................................................................................................................211.000.00-1.00-------------------------------
........................................................................................................................................................................................................AGTAGCTGGGATGACAGGGCGC............................221.000.00---1.00-----------------------------
..........................................................................TTTATTTATTTATTTTTCAAGATGGGTC....................................................................................................................................................2811.001.00------1.00--------------------------
..............................................................................................................................................................................................................TGGGATGACAGGCGTGGGAA........................201.000.00---------------------------1.00-----
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGCTAGGC.......301.000.00---1.00-----------------------------
...............................................................TTTTATTTTACTTTATTTCAG......................................................................................................................................................................211.000.00-1.00-------------------------------
........................................................CATTTTATTTTATTTTACTTCAAG..........................................................................................................................................................................241.000.00-1.00-------------------------------
...................................................................ATTTTACTTTATTTATTTATTTTCTGA............................................................................................................................................................271.000.00---1.00-----------------------------
........................................................................................................................................................................................................AGTAGCTGGGATGACAGGCGTACC..........................241.000.00---1.00-----------------------------
........................................................................ACTTTATTTATTTATTCACG..............................................................................................................................................................201.000.001.00--------------------------------
...............................................................................................................................................................................................................GGGATGACAGGCGTGAGCCAAAT....................231.000.00-----------------1.00---------------
.................................................................TTATTTTACTTTATTTATTTATTTTGCG.............................................................................................................................................................281.000.00---1.00-----------------------------
.........................................................................CTTTATTTATTTATTTTTCTATA..........................................................................................................................................................231.000.00--1.00------------------------------
..............................................................ATTTTATTTTACTTTATCG.........................................................................................................................................................................191.000.001.00--------------------------------
.........CCGCTTGCAGACATTCCAA..............................................................................................................................................................................................................................191.000.00--------------------1.00------------
......................TTATCACGCCCAACCAGTTTGAGGCCGA........................................................................................................................................................................................................2811.001.00--------------------------1.00------
.....................................................................TTTACTTTATTTATTTATTTTCAG.............................................................................................................................................................241.000.00---1.00-----------------------------
...................................................................ATTTTACTTTATTTATTTATTTTTTAG............................................................................................................................................................271.000.001.00--------------------------------
.....................................................................TTTACTTTATTTATTTATTTCTG..............................................................................................................................................................231.000.00-1.00-------------------------------
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGCTCGAG.......301.000.00---1.00-----------------------------
.......................................................TCATTTTATTTTATTTTACTTTATG..........................................................................................................................................................................251.000.00---1.00-----------------------------
.........................................................ATTTTATTTTATTTTACTTTATCTTG.......................................................................................................................................................................261.000.00---1.00-----------------------------
................................................................................................................................CAGTGGCACGATCACAGCTCACGTT.................................................................................................251.000.00---------------1.00-----------------
........................................................CATTTTATTTTATTTTACTTAG............................................................................................................................................................................221.000.001.00--------------------------------
...................................................................ATTTTACTTTATTTATTTATTTTTTTCG...........................................................................................................................................................281.000.00------1.00--------------------------
...............................................................TTTTATTTTACTTTATTTATTCAAA..................................................................................................................................................................251.000.00-1.00-------------------------------
........................................................CATTTTATTTTATTTTACTTTTTTG.........................................................................................................................................................................251.000.00--1.00------------------------------
.............................................................................................................................GTGCAGTGGCACGATCACGGCT.......................................................................................................221.000.00-------------1.00-------------------
.....................................................................TTTACTTTATTTATTTATTTGAT..............................................................................................................................................................231.000.00-1.00-------------------------------
.................................................................TTATTTTACTTTATTTATTTATTTTTCAG............................................................................................................................................................291.000.001.00--------------------------------
...................................................................ATTTTACTTTATTTATTTATTTTCGAG............................................................................................................................................................271.000.00---1.00-----------------------------
...............................................................TTTTATTTTACTTTATTTATA......................................................................................................................................................................211.000.00-1.00-------------------------------
.....................................................................TTTACTTTATTTATTTATTTTGGGG............................................................................................................................................................251.000.00-----1.00---------------------------
..............................................................ATTTTATTTTACTTTACCG.........................................................................................................................................................................191.000.00-1.00-------------------------------
......................................................................TTACTTTATTTATTTATTTTTCCAG...........................................................................................................................................................251.000.001.00--------------------------------
..............................................................ATTTTATTTTACTTTATTTATTTATTTTTCAG............................................................................................................................................................321.000.00----1.00----------------------------
........................................................................ACTTTATTTATTTATTTTTCTTA...........................................................................................................................................................231.000.00--1.00------------------------------
............................................................................................................TTGTCACCCAGGCTGGAGTGCAGCAAC...................................................................................................................271.000.00-----1.00---------------------------
................................................................................................................................................GCTCACTGCAACCTCTGTCTCCGGTTTC..............................................................................281.000.00-----1.00---------------------------
...........................................................TTTATTTTATTTTACTTTATTTCTAG.....................................................................................................................................................................261.000.001.00--------------------------------
..............................................................ATTTTATTTTACTTTATTTATTTATC..................................................................................................................................................................261.000.00---1.00-----------------------------
..................................................................TATTTTACTTTATTTATTTATTTTTAG.............................................................................................................................................................271.000.00-1.00-------------------------------
......................................................................TTACTTTATTTATTTATTTTTTCAT...........................................................................................................................................................251.000.00-1.00-------------------------------
...................................................................................................................................TGGCACGATCACAGCTCACTGCAACCG............................................................................................271.000.00-----1.00---------------------------
.AAGTGGTGCCGCTTGCAGACATTA.................................................................................................................................................................................................................................2411.001.00----------------------------1.00----
.........................................................ATTTTATTTTATTTTACTTTATTTATTTATTTTTG..............................................................................................................................................................351.000.00----1.00----------------------------
.........................................................ATTTTATTTTATTTTACTTTATGTG........................................................................................................................................................................251.000.00-----1.00---------------------------
.............................................................TATTTTATTTTACTTTCAAG.........................................................................................................................................................................201.000.00-1.00-------------------------------
.............................................................TATTTTATTTTACTTTATTTATTTATTTATG..............................................................................................................................................................311.000.00-1.00-------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATTTGAC..................................................................................................................................................................311.000.00---1.00-----------------------------
.......................................................................TACTTTATTTATTTATTTTTCCAG...........................................................................................................................................................241.000.00-1.00-------------------------------
...........................................................TTTATTTTATTTTACTTTATTTATAG.....................................................................................................................................................................261.000.00--1.00------------------------------
.....................................................................................................................................................................................................................ACAGGCGTGAGCCACCACGCCCGGGAGT.........281.000.00---1.00-----------------------------
......................................................................TTACTTTATTTATTTATTTTATTG............................................................................................................................................................241.000.00--1.00------------------------------
..............................................................ATTTTATTTTACTTTATTTATTTATTTTTTCAG...........................................................................................................................................................331.000.001.00--------------------------------
.......................................................TCATTTTATTTTATTTTACTTCAAG..........................................................................................................................................................................251.000.00-1.00-------------------------------
.......................................................................TACTTTATTTATTTATTCAAG..............................................................................................................................................................211.000.00-1.00-------------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATTTATTT.................................................................................................................................................................3230.670.67---0.67-----------------------------
...............................................................................................................................................AGCTCACTGCAACCTCTGTCTCCGGGGTTCAAG..........................................................................3330.670.67---0.67-----------------------------
.......................................................TCATTTTATTTTATTTTACTTTATTTTATT.....................................................................................................................................................................3050.600.20---0.20-0.40---------------------------
....................................CAGTTTGAGGCCGAG.......................................................................................................................................................................................................1520.500.50------------------------------0.50--
.......................................................TCATTTTATTTTATTTTACTTTATTTTG.......................................................................................................................................................................2850.400.20-0.40-------------------------------
...............................................................................................................................................AGCTCACTGCAACCTCTGTCTCCGGGGTT..............................................................................2930.330.33-----0.33---------------------------
.................................AACCAGTTTGAGGCC..........................................................................................................................................................................................................1540.250.25-----------0.25---------------------
...............................................................................................................................................AGCTCACTGCAACCTCTGTCTCCGGGG................................................................................2740.250.25---0.25-----------------------------
.........................................................ATTTTATTTTATTTTACTTTATTTATTTATT..................................................................................................................................................................3140.250.25---0.25-----------------------------
.......................................................TCATTTTATTTTATTTTACTTTATTT.........................................................................................................................................................................2650.200.20---0.20-----------------------------
.......................................................TCATTTTATTTTATTTTACTTTATTTTACT.....................................................................................................................................................................3050.200.20---0.20-----------------------------
.......................................................TCATTTTATTTTATTTTACTTTATTTTATG.....................................................................................................................................................................3050.200.20---0.20-----------------------------

Antisense strand
AAAGTGGTGCCGCTTGCAGACATTATCACGCCCAACCAGTTTGAGGCCGAGTAAGTCATTTTATTTTATTTTACTTTATTTATTTATTTTTCAAGATGGGTCTCGCTCTTGTCACCCAGGCTGGAGTGCAGTGGCACGATCACAGCTCACTGCAACCTCTGTCTCCGGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATGACAGGCGTGAGCCACCACGCCCGGCTAATTTTTGTAT
.........................................................................................((((...(((((..((....))..)))))...)))).(((((((((.........)).)))))))................................................................................................
.................................................................66........................................................................................156............................................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189784DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191493(GSM715603)
155genomic small RNA (size selected RNA from . (breast)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		TAX577743(Rovira)
total RNA. (breast)
........................................................................................................GCTCTTGTCACCCAGGCTCTG............................................................................................................................. 212.000.00---------1.00-1.00---------------------
......................................................................................................................GGCTGGAGTGCAGTGGCACGATCAGAGC........................................................................................................ 281.000.00---1.00-----------------------------
...........................................................................................................CTTGTCACCCAGGCTGGAGTGCAGTGGCGAT................................................................................................................ 311.000.00---------1.00-----------------------
......................................................................................................................................CAGTGAGCTGTGATCGTG.................................................................................................. 1801.001.00-------1.00-------------------------
.............................................................................................................................................................................................................................GAGCCACCACGCCCGGCTATG........ 211.000.00------------------------1.00--------
.......................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTTTTT........................................... 241.000.00--------1.00------------------------
......................................................................................................................................................................................................................................CGCCCGGCTAATTTTTGAGGT 211.000.00-----------------------1.00---------
............................................................................................................................................................................................................................TGAGCCACCACGCCCGGCTGGCG....... 231.000.00---1.00-----------------------------
....................................................................................................................................................................................................................GGCGTGGTGGCTCACGCCTGTC................ 2201.001.00-------1.00-------------------------
..................................................................................................................................................................CTCCGGGGTTCAAGCAATTCTCCCCTG............................................................. 271.000.00---1.00-----------------------------
....................................................................................................................CAGGCTGGAGTGCAGTGGCACGATCACGG......................................................................................................... 291.000.00-----1.00---------------------------
..............................................................................................................................................CAGCTCACTGCAACCTCTGTCTGC.................................................................................... 241.000.00-----1.00---------------------------
............................................................................................................................................................................................................................TGAGCCACCACGCCCGGCTGTCC....... 231.000.00-----1.00---------------------------
.......................................................................................................................................................................................CCTGCCTCAGCCTCCCGAGTAGCTTTTT....................................... 281.000.00-----1.00---------------------------
........................................................................................................................................................................................CTGCCTCAGCCTCCCGAGTAGCTGGGATCCG................................... 311.000.00---1.00-----------------------------
.............................................................................................................................................................................................................................GAGCCACCACGCCCGGCTAATTG...... 231.000.00------------------1.00--------------
....................................................................................................................................................................CCGGGGTTCAAGCAATTCTCCTGG.............................................................. 241.000.00----------1.00----------------------
...........................................................................................................................................................................................................................GTGAGCCACCACGCCCGGCTACCCC...... 251.000.00-----1.00---------------------------
............................................................................................................................................................................................................GCTGGGATGACAGGCGTGAGCCA....................... 231.000.00----------------1.00----------------
......................................................................................................................GGCTGGAGTGCAGTGGCACGATCAGAG......................................................................................................... 271.000.00---1.00-----------------------------
................................................................................................................................................................................................................................CCACCACGCCCGGCTAATAAGT.... 221.000.00-----1.00---------------------------
....................................................................................................................CAGGCTGGAGTGCAGTGGCACGATCACCG......................................................................................................... 291.000.00---------1.00-----------------------
.............................................AATGACTTACTCGGC.............................................................................................................................................................................................. 1520.500.50-------------------------------0.50-
.............................................................................................................................................................TGAGGCAGGAGAATTGCTTGAACCCCGGAGACAGA.......................................................... 3560.170.17--------------------------------0.17