ID: uc002yzo.2_intron_22_0_chr21_43280482_r.5p
GENE: (1)
chr21:43299179-43299428-


(1)
AGO2.ip
(10)
B-CELL
(1)
BRAIN
(13)
BREAST
(29)
CELL-LINE
(12)
CERVIX
(4)
HEART
(2)
HELA
(2)
LIVER
(1)
OTHER
(20)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
TCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGGTAAAGCTCCGGGCCCTGCGCCCGCCGCCCGCCCCGGCGTGCGCCCCGCCGGCCCCGGGCCGCACCCGCTGCCCCCGCGAGCCCCGGCGCGCCCTGGGCCCGCTGCCCCCCGCCCCCCGCGCCCGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGTTACATTCGCCGGCTGCGGGCACCGTTG
.......................................................((.(((((.((.(((..(((((((......)))).)))...))).)).)))))))............................................................................................................................................
..................................................51...............................................................116....................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577741(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189783TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038862(GSM458545)
MM472. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532877(GSM532877)
G691N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
GSM956925PAZD5SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................CCCCGCCGGCCCCGGGGGA..........................................................................................................................................196.000.003.00--3.00--------------------------------------------------------------------------------------------------
...............................CTGCACATTCCAAAGGCAGGT......................................................................................................................................................................................................2114.004.00-4.00----------------------------------------------------------------------------------------------------
................................................................................................CGCCGGCCCCGGGCCGCCGG......................................................................................................................................203.000.001.00--1.00---------------------------------------1.00----------------------------------------------------------
..........GAGTCCGGATCCGATCCCGC............................................................................................................................................................................................................................2013.003.00--3.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................CCCCCCGCGCCCGGCA........................................................................1652.802.801.60--1.000.20-------------------------------------------------------------------------------------------------
........................................................................CGCCGCCCGCCCCGGCGGCGG.............................................................................................................................................................212.000.002.00-----------------------------------------------------------------------------------------------------
.....................................................AAGCTCCGGGCCCTGCGC...................................................................................................................................................................................1812.002.00-----------2.00------------------------------------------------------------------------------------------
.................................................................................................GCCGGCCCCGGGCCGCCGG......................................................................................................................................192.000.00---1.00----------------------------------------------1.00---------------------------------------------------
..................................................GTAAAGCTCCGGGCCCTG......................................................................................................................................................................................1812.002.00-2.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGGGGA...........................................................................201.000.001.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TTCGCCGGCTGCGGG........1511.001.00---------1.00--------------------------------------------------------------------------------------------
.CGCAACCCGGAGTCCGGA.......................................................................................................................................................................................................................................1811.001.00-------------------------------------------------------------------1.00----------------------------------
...............................................................................................CCGCCGGCCCCGGGCCACCA.......................................................................................................................................201.000.001.00-----------------------------------------------------------------------------------------------------
...............CGGATCCGATCCCGCTCTGCACATTCCAAAGGC..........................................................................................................................................................................................................3311.001.00---------1.00--------------------------------------------------------------------------------------------
................................................................................................CGCCGGCCCCGGGCCTTC........................................................................................................................................181.000.00------------------------------1.00-----------------------------------------------------------------------
.............TCCGGATCCGATCCCGCTCTGCACACTCC................................................................................................................................................................................................................291.000.00-----------------------------1.00------------------------------------------------------------------------
.....................................................................................................................................................CCGCTGCCCCCCGCCCACC..................................................................................191.000.00-------------------------------------------------------------1.00----------------------------------------
..........................................................................................................................................................................................................................TTTGTTACATTCGCCGGATG............201.000.00----------------------------------------1.00-------------------------------------------------------------
.................................................................................CCCCGGCGTGCGCCCCTG.......................................................................................................................................................181.000.00-----------------------------------1.00------------------------------------------------------------------
............................................AGGCAGGTAAAGCTCCGGGCCCTGC.....................................................................................................................................................................................2511.001.00------------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................CCCGCGAGCCCCGGCGCGGGG..........................................................................................................211.000.00---------------------------------------------------------------------------------1.00--------------------
...........................................................................................CGCCCCGCCGGCCCCGGG.............................................................................................................................................1811.001.00----------1.00-------------------------------------------------------------------------------------------
...............................................................................................CCGCCGGCCCCGGGCCGGGGG......................................................................................................................................211.000.00---1.00--------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGGGGG...........................................................................201.000.001.00-----------------------------------------------------------------------------------------------------
................................................................CCTGCGCCCGCCGCCCGCCCCG....................................................................................................................................................................2211.001.00--------------------------------------1.00---------------------------------------------------------------
...............................................................................................CCGCCGGCCCCGGGCTGGG........................................................................................................................................191.000.00---1.00--------------------------------------------------------------------------------------------------
........................................................................................................................GCCCCCGCGAGCCCCGGGGA..............................................................................................................201.000.001.00-----------------------------------------------------------------------------------------------------
..............................................................................................CCCGCCGGCCCCGGGTC...........................................................................................................................................171.000.00-------------------------------------------------------------------------------1.00----------------------
..........................................................................................GCGCCCCGCCGGCCCCGGATC...........................................................................................................................................211.000.00----------------------------------------------------------------1.00-------------------------------------
.......................................................................................................................................................................................................................TTCTTTGTTACATTCGCCGGCTGCGGGCAC.....3011.001.00-----------------------------1.00------------------------------------------------------------------------
..................................................................................CCCGGCGTGCGCCCCCT.......................................................................................................................................................171.000.00-------------------------------------------------------------------------1.00----------------------------
..............................................................................................................................GCGAGCCCCGGCGCGAG...........................................................................................................171.000.00-------------------------1.00----------------------------------------------------------------------------
............GTCCGGATCCGATCCCGCTCTGC.......................................................................................................................................................................................................................2311.001.00----------------------1.00-------------------------------------------------------------------------------
.........................................................................................................................................................................................................................CTTTGTTACATTCGCCGG...............1811.001.00-----------------------------------------------------------1.00------------------------------------------
........CGGAGTCCGGATCCGATCCCGCTCT.........................................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------1.00------------------------
.......................................................................CCGCCGCCCGCCCCGGCGGGC..............................................................................................................................................................211.000.00--------1.00---------------------------------------------------------------------------------------------
.......................................................................CCGCCGCCCGCCCCGGGG.................................................................................................................................................................181.000.00------------------------------1.00-----------------------------------------------------------------------
................................................AGGTAAAGCTCCGGGCCCTGC.....................................................................................................................................................................................2111.001.00------1.00-----------------------------------------------------------------------------------------------
..................................................................................................CCGGCCCCGGGCCGCCGG......................................................................................................................................181.000.001.00-----------------------------------------------------------------------------------------------------
........................................................................................................................GCCCCCGCGAGCCCCGGG................................................................................................................181.000.00--------------1.00---------------------------------------------------------------------------------------
.............................CTCTGCACATTCCAAAGGC..........................................................................................................................................................................................................1911.001.00---------1.00--------------------------------------------------------------------------------------------
.....................CGATCCCGCTCTGCACATTCCAAAGGCAG........................................................................................................................................................................................................2911.001.00------------------------------------------1.00-----------------------------------------------------------
....................................................................................................................................CCCGGCGCGCCCTGGGAGAG..................................................................................................201.000.00------------------------------------------------------------------1.00-----------------------------------
...............................................CAGGTAAAGCTCCGGGC..........................................................................................................................................................................................1711.001.00---------1.00--------------------------------------------------------------------------------------------
................................................AGGTAAAGCTCCGGGCCCT.......................................................................................................................................................................................1911.001.00--1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................GTTACATTCGCCGGCTGC...........1811.001.00---------------------------------------------------------------1.00--------------------------------------
......................................................................CCCGCCGCCCGCCCCGGGG.................................................................................................................................................................191.000.00--------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................TGCCCCCGCGAGCCCCG..................................................................................................................1711.001.001.00-----------------------------------------------------------------------------------------------------
..................ATCCGATCCCGCTCTG........................................................................................................................................................................................................................1611.001.00-------1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGGCGA...........................................................................201.000.001.00-----------------------------------------------------------------------------------------------------
..............................TCTGCACATTCCAAAGGCAGG.......................................................................................................................................................................................................2111.001.00------1.00-----------------------------------------------------------------------------------------------
...............................CTGCACATTCCAAAGGCAGG.......................................................................................................................................................................................................2011.001.00----1.00-------------------------------------------------------------------------------------------------
................................................................................................................................GAGCCCCGGCGCGCCGGGC.......................................................................................................191.000.00---------------------------------------------------------------------1.00--------------------------------
...................................................................................................................................CCCCGGCGCGCCCTGAC......................................................................................................171.000.00-----------------------------------------------1.00------------------------------------------------------
.........................................................................................TGCGCCCCGCCGGCCCCG...............................................................................................................................................1821.001.00-----------1.00------------------------------------------------------------------------------------------
.................................................................CTGCGCCCGCCGCCCGCCC......................................................................................................................................................................1920.500.50----------------------------------------------------------------------------------------------0.50-------
........................................................................................GTGCGCCCCGCCGGC...................................................................................................................................................1540.250.25-------------------------------------------------------------------------------------------------0.25----
..................................................................................................................................................................................GCCGCGCGCCGCCCCG........................................................1640.250.25-------------------------------------0.25----------------------------------------------------------------
.....................................................................GCCCGCCGCCCGCCCCG....................................................................................................................................................................1770.140.14--------------------------------------0.14---------------------------------------------------------------
..............................................................................................................................................................CCCGCCCCCCGCGCCCG...........................................................................1780.120.120.12-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................CCGCCCCCCGCGCCCGGC.........................................................................1880.120.12----------------------------------------------------------------------------------------------------0.12-
......................................................................CCCGCCGCCCGCCCCGGC..................................................................................................................................................................1880.120.12---------------------------------------0.12--------------------------------------------------------------

Antisense strand
TCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGGTAAAGCTCCGGGCCCTGCGCCCGCCGCCCGCCCCGGCGTGCGCCCCGCCGGCCCCGGGCCGCACCCGCTGCCCCCGCGAGCCCCGGCGCGCCCTGGGCCCGCTGCCCCCCGCCCCCCGCGCCCGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGTTACATTCGCCGGCTGCGGGCACCGTTG
.......................................................((.(((((.((.(((..(((((((......)))).)))...))).)).)))))))............................................................................................................................................
..................................................51...............................................................116....................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577741(Rovira)
total RNA. (breast)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189783TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR038862(GSM458545)
MM472. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM532876(GSM532876)
G547T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040011(GSM532896)
G529T. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038863(GSM458546)
MM603. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532877(GSM532877)
G691N. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577588(Rovira)
total RNA. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
GSM532874(GSM532874)
G699T. (cervix)
SRR040036(GSM532921)
G243N. (cervix)
GSM956925PAZD5SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM339994(GSM339994)
hues6. (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038860(GSM458543)
MM426. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040006(GSM532891)
G601N. (cervix)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................................................................................................................................................CGCGCGCCGCCCCGGCGC.................................................... 186.000.00----------1.00--------2.00-------------------1.00---------1.00------------------------1.00---------------------------
.........................................................................................................................................................................................CGGCTGGACCGGGGCGGC............................................... 1814.004.00---------------1.00------1.00---------------------1.00-------------------------1.00-------------------------------
...........................................................................................................................CCCGCGAGCCCCGGCGT.............................................................................................................. 174.000.00-------------3.00---------------------------------------------------------------------------1.00------------
........................................................................................................................................................................................GCGGCTGGACCGGGGCGGCG.............................................. 2014.004.00----1.001.00------1.00----1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................................................ATGTAACAAAGAACAGTCGGC...................... 2113.003.00------------------2.00-1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................GCGGCTGGACCGGGGCGG.............................................. 1813.003.00-----1.00--------------------1.00-1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................................AACAGTCGGCATGGCGGC................................. 1813.003.00-2.00---------------------------------------------------1.00------------------------------------------------
.............................................................................................................................................................................................................GAATGTAACAAAGAACAGTCGGCAT.................... 2513.003.00--------------------------------1.00-1.00---------------------1.00---------------------------------------------
.............................................................................................................................................................................................................TAACAAAGAACAGTCGGCAT......................... 2013.003.00--------3.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................................ATGTAACAAAGAACAGTCGG...................... 2013.003.00--3.00---------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TGGCGGCTGGACCGGGGCGG............................................ 2012.002.00------2.00-----------------------------------------------------------------------------------------------
....................................................................CGCCCGCCGCCCGCCCCAAAA................................................................................................................................................................. 212.000.00------------------------------------2.00-----------------------------------------------------------------
.....................................................................................................................................................................................................AAGAACAGTCGGCATGGCGGCTG.............................. 2312.002.00-------2.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................GTCGGCATGGCGGCTGGACCGGG..................................... 2312.002.00------1.00-------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCAGCCGCGCGCCGCG........................................................... 182.000.00-1.00--------------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................GCCGCGCGCCGCCCCGCC...................................................... 182.000.00-----------------------1.00---------------------------------------------------------------1.00--------------
...............................................................................................................................................................................................GTCGGCATGGCGGCTGGACCGG..................................... 2212.002.00-------------------------------2.00----------------------------------------------------------------------
.........................................................................................................................................................................................................AGAACAGTCGGCATGGCG............................... 1812.002.00---------------------------------2.00--------------------------------------------------------------------
....................................................................................................................................................................................CGCGCGCCGCCCCGGCG..................................................... 172.000.00--------------1.00----------1.00----------------------------------------------------------------------------
...........................................................................................................................................................................................TGGCGGCTGGACCGGGGCG............................................ 1912.002.00-2.00----------------------------------------------------------------------------------------------------
......................................................................................................................................................................................GGCTGGACCGGGGCGGCGCG................................................ 2012.002.00--2.00---------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AAGAACAGTCGGCATGGC.............................. 1812.002.00--------------------------------1.00-------------------------------------------------1.00-------------------
............................................................................................................................................................................................................TAACAAAGAACAGTCGGCATG......................... 2112.002.00----------------2.00-------------------------------------------------------------------------------------
..................................................................................................................................................................CCCCCCGCGCCCGGCGA....................................................................... 172.000.002.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GTAACAAAGAACAGTCGGCATGG........................ 2312.002.00----2.00-------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ATGTAACAAAGAACAGTCGGCA...................... 2212.002.00-----2.00------------------------------------------------------------------------------------------------
.............................................................................................CCCCGCCGGCCCCGGGG............................................................................................................................................ 171.000.001.00-----------------------------------------------------------------------------------------------------
..............................................................GCCCTGCGCCCGCCGGC........................................................................................................................................................................... 171.000.00---------------------------------------------------------------------------1.00--------------------------
................................................................CCTGCGCCCGCCGCCCAAAT...................................................................................................................................................................... 201.000.00----------------------------------------------------------1.00-------------------------------------------
.............................................................................................................................................................................................................TGTAACAAAGAACAGTCGGCAT....................... 2211.001.00------------------------------------------------------------------------1.00-----------------------------
....................................................................................................................................................................................CGCGCGCCGCCCCGGCGCG................................................... 191.000.00------------------------------------------------------------------------------------------1.00-----------
...........................................................................................................................................CGCCCTGGGCCCGCTGGGGG........................................................................................... 201.000.00--------------------------------------------------------------------------------1.00---------------------
.........................................................................................................................................................................................................AACAAAGAACAGTCGGCATGGCG.......................... 2311.001.00------------------------------------------------1.00-----------------------------------------------------
...........................................................................................................................................................................................................ATGTAACAAAGAACAGTCGGCATGG...................... 2511.001.00-------------------------------------1.00----------------------------------------------------------------
..........................................................................................................................................................................................................GAATGTAACAAAGAACAGTCGGCATGGC.................... 2811.001.00-------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TGGCGGCTGGACCGGGGCGGC............................................ 2111.001.00-----------------------------------------------------------------------------------1.00------------------
...................................................................................................................................................................................CCGCGCGCCGCCCCGGTCCAGCA................................................ 231.000.00-----------------1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................GGCGAATGTAACAAAGAACAGTCGG................. 2511.001.00--------1.00---------------------------------------------------------------------------------------------
.............................................................................................CCCCGCCGGCCCCGGGGACC......................................................................................................................................... 201.000.00---1.00--------------------------------------------------------------------------------------------------
...................................................................GCGCCCGCCGCCCGCCCTGG................................................................................................................................................................... 201.000.00-----------------------------------------1.00------------------------------------------------------------
.............................................................................................................................................................................CGGCAGCCGCGCGCCCA............................................................ 171.000.00---------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................................................CGGCTGGACCGGGGCGGCGCGC............................................... 2211.001.00------------------------------------------------------------------------------1.00-----------------------
..........................................................................................GCGCCCCGCCGGCCCCGGGGGGA......................................................................................................................................... 231.000.001.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................................................CCGCGCCCGGCAGCCGTAGG................................................................ 201.000.00------------------------------------------------------------1.00-----------------------------------------
.....................................................................................................................................................CCGCTGCCCCCCGCCCCCCTGC............................................................................... 221.000.00-----------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................GTAACAAAGAACAGTCGG........................ 1811.001.00------------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................CTGTTCTTTGTTACATCCGG.................. 201.000.00----------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCCGACTGTTCTTTGTTACG....................... 201.000.00--1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ACAAAGAACAGTCGGCATGG........................... 2011.001.00---------------1.00--------------------------------------------------------------------------------------
....................................................................CGCCCGCCGCCCGCCCAGC................................................................................................................................................................... 191.000.00---------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................AACAAAGAACAGTCGGCATGG.......................... 2111.001.00----------------------------------------------------------------------------1.00-------------------------
..............TGCAGAGCGGGATCGGATCCGG...................................................................................................................................................................................................................... 2211.001.00----------------------------1.00-------------------------------------------------------------------------
.............................................................................................................................................................GCCGGGCGCGGGGGGCGGGG......................................................................... 2021.001.00--------------------------------------------------------------------1.00---------------------------------
...............................................................................................................................................................................................................TAACAAAGAACAGTCGGC......................... 1811.001.00-----1.00------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCTGCCCCCCGCCCCCATAA............................................................................... 211.000.00---------------------------------------------------------1.00--------------------------------------------
.................................................................CTGCGCCCGCCGCCCATAT...................................................................................................................................................................... 191.000.001.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGTGGG........................................................................... 201.000.00-----------------------1.00------------------------------------------------------------------------------
..........................................................................................GCGCCCCGCCGGCCCCGG.............................................................................................................................................. 181.000.00----------------------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................GCGGCTGGACCGGGGC.............................................. 1611.001.00------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................................................CATGGCGGCTGGACCGGGGC.......................................... 2011.001.00------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................GTAACAAAGAACAGTCGGCA........................ 2011.001.00-------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TAACAAAGAACAGTCGGCA......................... 1911.001.00---------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................................................................GAATGTAACAAAGAACAGTCGGCATGGCGG.................... 3011.001.00------------------------1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................................................CGGCGAATGTAACAAAGAACAGTC................ 2411.001.00--------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................CCCCCCGCGCCCGGCGTG...................................................................... 181.000.00----1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGGACCGGGGCGGCGCGCGG.................................................. 2111.001.00----1.00-------------------------------------------------------------------------------------------------
..........GCGGGATCGGATCCGGACTC............................................................................................................................................................................................................................ 2011.001.00--------------------------------------------------------------------------------------1.00---------------
.......................................................................CCGCCGCCCGCCCCGGCACCG.............................................................................................................................................................. 211.000.00-------------------------------------------------------------------------------------1.00----------------
.............................................................................................................................................................................................CCCCGGTCCAGCCGCTGG........................................... 181.000.00---------------------------------------------------------------------------------------------1.00--------
...........................................................................................CGCCCCGCCGGCCCCGGGG............................................................................................................................................ 1911.000.00-----------------------------------------------------------------------1.00------------------------------
............................................................................................................................................................................................................GAATGTAACAAAGAACAGTCGGCATG.................... 2611.001.00--------------------------------------------------------------------------------------------1.00---------
..............................................................................................CCCGCCGGCCCCGGGCCG.......................................................................................................................................... 181.000.001.00-----------------------------------------------------------------------------------------------------
.............................................................................................................CCGCACCCGCTGCCCCGCT.......................................................................................................................... 191.000.00---------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................................................................................AAAGAACAGTCGGCATGG............................. 1811.001.00-----1.00------------------------------------------------------------------------------------------------
...................................................................GCGCCCGCCGCCCGCCCCC.................................................................................................................................................................... 191.000.00---------------------------1.00--------------------------------------------------------------------------
..........................................................................................GCGCCCCGCCGGCCCTGG.............................................................................................................................................. 181.000.00--------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................................................................................................GCCATGCCGACTGTTCTTA............................. 191.000.00-------------------------------------------------------------------------------------------1.00----------
.........................................................................................................................................................................................ATGGCGGCTGGACCGGGGCGGC........................................... 2211.001.00---------1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................CGGCAGCCGCGCGCCGC............................................................ 171.000.00-------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................................................................CATGGCGGCTGGACCGGGGCGG.......................................... 2211.001.00--1.00---------------------------------------------------------------------------------------------------
......................................................................................................CCCCGGGCCGCACCCGCGGG................................................................................................................................ 201.000.001.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CGGCGAATGTAACAAAGAACA................ 2111.001.00-------1.00----------------------------------------------------------------------------------------------
..........................................................................................GCGCCCCGCCGGCCCCGGGGGG.......................................................................................................................................... 221.000.00---1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CGGCTGGACCGGGGCGGCG............................................... 1911.001.00---------------------------------------------------1.00--------------------------------------------------
...........................................................................................................................................................................................................AATGTAACAAAGAACAGTCGGCATGG..................... 2611.001.00--------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................GCCGCGCGCCGCCCCGC....................................................... 171.000.00------------1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AAGAACAGTCGGCATGGCG.............................. 1911.001.00----------------1.00-------------------------------------------------------------------------------------
..........................................................................................................................................GCGCCCTGGGCCCGCTTGG............................................................................................. 191.000.00------------------------------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................................................AAAGAACAGTCGGCATGGC............................. 1911.001.00----------------------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................................................GAATGTAACAAAGAACAG.................... 1811.001.00----------------------------------------------------------------------------------------1.00-------------
................................................................................................................................................................................................CGGCATGGCGGCTGGACCG....................................... 1911.001.00-----------------------------------------------------------------1.00------------------------------------
................................................................................................................................................................................CAGCCGCGCGCCGCCCCGGAGC.................................................... 221.000.00---------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................CCCCCCGCCCCCCGCGT.............................................................................. 171.000.00----------1.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................GGGGGGCGGGGGGCAGCGG.................................................................................. 1920.500.50-----------------------------------------------------------------------------------------------0.50------
.......CGGATCCGGACTCCGG................................................................................................................................................................................................................................... 1620.500.50------------------------------------------------------------------------------------------------0.50-----
...............................................................................................................................................................................................TGGCGGCTGGACCGG............................................ 1530.330.33----0.33-------------------------------------------------------------------------------------------------
...............................................................................................................................................................GCCGGGCGCGGGGGGCGG......................................................................... 1880.250.25----------------------------------------0.12------------------------------------------------------------0.12
.....................................................................................................GGTGCGGCCCGGGGC...................................................................................................................................... 1570.140.14--------------------------------------------------------------------------------------------------0.14---
..................................................................CGGGCGGCGGGCGCA......................................................................................................................................................................... 1580.120.12---------------------------------------------------------------------------------------------------0.12--