ID: uc002yvi.2_intron_8_0_chr21_37721707_f.3p
GENE: (9)
chr21:37728718-37728967+


(3)
B-CELL 		(2)
BRAIN 		(8)
BREAST 		(9)
CELL-LINE 		(7)
CERVIX 		(4)
LIVER 		(1)
OTHER 		(9)
SKIN 		(2)
UTERUS

Sense strand
TCTAATTTATTGAAAGAAAATTGTGTATAAGTGCAGTTCAAACCTGTGTTGTTCAAGGGTCACCTATACCTTGAATGTTCTTTATTAACTATATGTTTTGGAGTTTTTTCTCTTCACAGTGTCTATGTACTCATTACTAGATTATTTATGATTTATGTTTGAAAAGAATTTTTTCTTGATTTTATGATTTACTTTTTAAGACTTACAATAACAGCACTAGGAGAAAAGCTGAATGATTACTGGAATGAAA
........................................................................................................................(((((.(((.....))))))))......(((.(((((......(((((....))))).....))))).)))...........................................................
...........................................................................................................108.........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR189783SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR040008(GSM532893)
G727N. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532872(GSM532872)
G652T. (cervix)		SRR189785SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
................................................................................................................TTCACAGTGTCTATGTTCTG......................................................................................................................2025.000.0024.00-------------------------------1.00----------------
................................................................................................................TTCACAGTGTCTATGTTTTG......................................................................................................................2010.000.0010.00------------------------------------------------
.................................................................................................................................................................................................................................AAGCTGAATGATTACTGG.......1818.008.00-8.00-----------------------------------------------
................................................................................................................TTCACAGTGTCTATGTTCCG......................................................................................................................208.000.003.00-------1.00---------------1.001.00----1.00---------------1.00--
................................................................................................................TTCACAGTGTCTATGTTTCG......................................................................................................................206.000.006.00------------------------------------------------
................................................................................................................TTCACAGTGTCTATGTT.........................................................................................................................175.000.00-----3.00-1.00-1.00---------------------------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAATGATTACTG........2414.004.00---1.003.00--------------------------------------------
................................................................................................................TTCACAGTGTCTATGTTCT.......................................................................................................................193.000.00-----------------------------1.00--------1.00----1.00-----
................................................................................................................TTCACAGTGTCTATGTTC........................................................................................................................182.000.00-------1.001.00----------------------------------------
.........................................................................................................................................................................................................................TAGGAGAAAAGCTGAATGATTACT.........2412.002.00------2.00------------------------------------------
................................................................................................................TTCACAGTGTCTATGTTCTT......................................................................................................................202.000.001.00--------------------------------------1.00---------
.................................................................................................................................................................................................................................AAGCTGAATGATTACTGGAATGAA.2412.002.00--2.00----------------------------------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAATGATT............2012.002.00--1.00-----------------------1.00----------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAACT...............171.000.00------------------1.00------------------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAATGATTACT.........2311.001.00---1.00---------------------------------------------
................................................................................................................TTCACAGTGTCTATGTTTAG......................................................................................................................201.000.001.00------------------------------------------------
.................................................................................................................................................................................................................................AAGCTGAATGATTACTGGAA.....2011.001.00---------1.00---------------------------------------
....................................................................................................................................................................................................................AGCACTAGGAGAAAAGCT....................1811.001.00---1.00---------------------------------------------
..................................................................................................................................................................................................................................AGCTGAATGATTACTGGAATGAA.2311.001.00-----------------1.00-------------------------------
.........................................................................................................................................................................................................CTTACAATAACAGCACTAGGAGAAAA.......................2611.001.00----------------------------1.00--------------------
...................................................................................................................................................................................TTTTATGATTTACTTTTTAAGA.................................................2211.001.00---------------1.00---------------------------------
..........................................................................................ATATGTTTTGGAGTTTTTTC............................................................................................................................................2011.001.00-----------------------1.00-------------------------
......................................................................................................................................................................AATTTTTTCTTGATTTTTGT................................................................201.000.00-------------------------------1.00-----------------
................................................................................................................TTCACAGTGTCTATGTTCC.......................................................................................................................191.000.00--------------1.00----------------------------------
................................................................................................................TTCACAGTGTCTATGTTTA.......................................................................................................................191.000.00----------------------------------------1.00--------
..............................................................................TCTTTATTAACTATATG...........................................................................................................................................................1711.001.001.00------------------------------------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAATGATTACTGGAATG...2911.001.00--1.00----------------------------------------------
..............................................................................................................................................................................................................................GAAAAGCTGAATGATTACTGGAAT....2411.001.00------------------------------------1.00------------
...............................................................................................................................................................................TTGATTTTATGATTTACTTTTT.....................................................2211.001.00---------------------------------1.00---------------
...................................................................................................GGAGTTTTTTCTCTTACCA....................................................................................................................................191.000.00--------------------------------------------1.00----
.........................................................................................................................................................................................................................TAGGAGAAAAGCTGAATGATTAC..........2311.001.00----------------------------------1.00--------------
................................................................................................................TTCACAGTGTCTATGTTTG.......................................................................................................................191.000.00-------------1.00-----------------------------------
.....................................................................................................................................................................................................................GCACTAGGAGAAAAGCTGAATGATTACT.........2811.001.00--1.00----------------------------------------------
.....................................................................................................................................................GATTTATGTTTGAAAAGAATTTTT.............................................................................2411.001.00-----------------------------------1.00-------------
.................................................................................................................................................................................................................................AAGCTGAATGATTACTGGAAT....2111.001.00-------------------------------------1.00-----------
.........................................................................................................................................................................................................................TAGGAGAAAAGCTGAATG...............1811.001.00----------1.00--------------------------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAATGATTA...........2111.001.00---1.00---------------------------------------------
..............................................................................................................................................................................................................................GAAAAGCTGAATGATTACTG........2011.001.00----------1.00--------------------------------------
................................................................................................................TTCACAGTGTCTATGTTATG......................................................................................................................201.000.001.00------------------------------------------------
....................................................................................................................................................................AGAATTTTTTCTTGACATC...................................................................191.000.00----------------------1.00--------------------------
.......................................................................................................................................................................................................GACTTACAATAACAGCACTAGGAGAACAGC.....................301.000.00-------------------1.00-----------------------------
...................................................................................................................................................................................TTTTATGATTTACTTCAAC....................................................191.000.00------------1.00------------------------------------
..................................................................................................................................................TATGATTTATGTTTGAAAAGAATT................................................................................2411.001.00------------------------------------------1.00------
......................................................................................................GTTTTTTCTCTTCACTTTA.................................................................................................................................191.000.00---------------------------------------------1.00---
.........................................................................................TATATGTTTTGGAGTTTATTT............................................................................................................................................211.000.00------------1.00------------------------------------
.........................................................................................................................................................................................................CTTACAATAACAGCACTAGGAGA..........................2311.001.00--------------------1.00----------------------------
..........................................................................................................................................................................................................................AGGAGAAAAGCTGAATGATTAC..........2211.001.00---------------------1.00---------------------------

Antisense strand
TCTAATTTATTGAAAGAAAATTGTGTATAAGTGCAGTTCAAACCTGTGTTGTTCAAGGGTCACCTATACCTTGAATGTTCTTTATTAACTATATGTTTTGGAGTTTTTTCTCTTCACAGTGTCTATGTACTCATTACTAGATTATTTATGATTTATGTTTGAAAAGAATTTTTTCTTGATTTTATGATTTACTTTTTAAGACTTACAATAACAGCACTAGGAGAAAAGCTGAATGATTACTGGAATGAAA
........................................................................................................................(((((.(((.....))))))))......(((.(((((......(((((....))))).....))))).)))...........................................................
...........................................................................................................108.........................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191468(GSM715578)
116genomic small RNA (size selected RNA from . (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)		TAX577580(Rovira)
total RNA. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR189783SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040031(GSM532916)
G013T. (cervix)		SRR040008(GSM532893)
G727N. (cervix)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040025(GSM532910)
G613T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM532872(GSM532872)
G652T. (cervix)		SRR189785SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
..........................................................................................................................................................ATGTTTGAAAAGAATTTTG............................................................................. 192.000.00-----------2.00-------------------------------------
.......................................................................................................................................................................................ATGATTTACTTTTTAGGGA................................................ 191.000.00---------------------------1.00---------------------
............................AAGTGCAGTTCAAACCTGTC.......................................................................................................................................................................................................... 201.000.00----------------1.00--------------------------------
............AAAGAAAATTGTGTATATG........................................................................................................................................................................................................................... 191.000.00-----------------------------------------1.00-------
...............................................................................................................ATAGACACTGTGAAG............................................................................................................................ 1580.250.25-----------------------------------------------0.25-
...........................................................................................................................................TAAATCATAAATAATC............................................................................................... 1690.220.22------------------------------------------------0.22