ID: uc002yei.2_intron_5_0_chr20_61870963_f.3p
GENE: (6)
chr20:61871408-61871657+


(1)
AGO2.ip
(1)
BRAIN
(5)
BREAST
(2)
CELL-LINE
(10)
CERVIX
(3)
HEART
(4)
OTHER
(47)
SKIN

Sense strand
TGGGATACCCCATACTGGCCGAGGGACAGGTGCTGTGACCGCCTCGGGGCTCCCCAGAGCCTCTGTAGTTACCCCCGGGATGTGTCTGAAGATCTGGCAGGGGACAAAGTGGTCGGGCAGGGAACTCTGGGATCTGAGGCCCCTGGCTAGGTGGGCCCCGTCGGTTGCCATTGACTCACCCACCCCTCCTCTCCCTCTAGGTGCCATGGCCGGCCAGGTGGGCTGCAGAGTGGGCTCCCTGCCCCTCTCT
...................................................................................................(((((..........((.(((((..(((........)))..))))).)).((((((....((((((....))))))...)))))).......)))))......................................................
...................................................................................................100..................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189786SRR040015(GSM532900)
G623T. (cervix)
SRR189784SRR040034(GSM532919)
G001N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
..................................................................................................................................................................................CCCACCCCTCCTCTCCGCGC....................................................20133.000.0014.0014.008.003.005.006.006.003.003.002.005.002.003.004.003.004.003.003.002.001.003.002.003.002.001.001.00-1.002.002.001.001.002.00--2.001.00-2.001.00-1.00--1.00------1.001.001.00-1.00--1.00-1.00--1.001.00-1.00--1.00--
..................................................................................................................................................................................CCCACCCCTCCTCTCCGCG.....................................................1947.000.005.002.002.008.002.00-1.001.002.002.001.002.001.001.002.00-1.00-1.001.00---1.001.00--2.00--1.00--1.00--1.00----1.00---1.00--1.001.00---------1.00------------
...................................................................................................................................................................................CCACCCCTCCTCTCCGCGC....................................................1922.000.001.00-5.001.001.001.00-2.001.001.00-1.00-----1.00-1.00-1.00---------1.00-----2.00-1.00----------------------1.00---------
...................................................................................................................................................................................CCACCCCTCCTCTCCGCG.....................................................1810.000.001.00--------1.00--1.00-----1.00------2.00--1.00----1.00-------------1.00-----------------------1.00
........................................................................................................CAAAGTGGTCGGGCAGGTAG..............................................................................................................................202.000.00----------------------------------------1.00---------1.00---------------------
..................................................................................................................................................................................CCCACCCCTCCTCTCGCGC.....................................................191.000.00--------------------------------------------------------------------1.00---
........................................................................................................CAAAGTGGTCGGGCAGGTA...............................................................................................................................191.000.00----------------------------------------1.00-------------------------------
..................................................................................................................................................................................CCCACCCCTCCTCTCCGCCC....................................................201.000.00------------------------1.00-----------------------------------------------
........................................................................................................................................................................................................................GGTGGGCTGCAGAGTGGGCTCCCT..........2411.001.00--------------------------1.00---------------------------------------------
........................................................................................................CAAAGTGGTCGGGCAGAT................................................................................................................................181.000.00----------------------------------------------------------------------1.00-
........................................................................................................................................................................................................................GGTGGGCTGCAGAGTGGGCTCCAT..........241.000.00--------------------------1.00---------------------------------------------
.................................................................................................................CGGGCAGGGAACTCTG.........................................................................................................................1621.001.00---------------0.50-------------0.50------------------------------------------
......................................................................................................................................................................................CCCCTCCTCTCCCTC.....................................................1501.001.00-----------------------------------------------------------------1.00------
..........................................................................................................................................................................................................................TGGGCTGCAGAGTGGGCT..............1811.001.00-------------------------------------------------------------1.00----------

Antisense strand
TGGGATACCCCATACTGGCCGAGGGACAGGTGCTGTGACCGCCTCGGGGCTCCCCAGAGCCTCTGTAGTTACCCCCGGGATGTGTCTGAAGATCTGGCAGGGGACAAAGTGGTCGGGCAGGGAACTCTGGGATCTGAGGCCCCTGGCTAGGTGGGCCCCGTCGGTTGCCATTGACTCACCCACCCCTCCTCTCCCTCTAGGTGCCATGGCCGGCCAGGTGGGCTGCAGAGTGGGCTCCCTGCCCCTCTCT
...................................................................................................(((((..........((.(((((..(((........)))..))))).)).((((((....((((((....))))))...)))))).......)))))......................................................
...................................................................................................100..................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189786SRR040015(GSM532900)
G623T. (cervix)
SRR189784SRR040034(GSM532919)
G001N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577746(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040029(GSM532914)
G026T. (cervix)
SRR189787SRR040011(GSM532896)
G529T. (cervix)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR040009(GSM532894)
G727T. (cervix)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR038859(GSM458542)
MM386. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577743(Rovira)
total RNA. (breast)
SRR040027(GSM532912)
G220T. (cervix)
.........................................................................................................................................................................................................................................GCTCCCTGCCCCTCTGAG 182.000.00----------------------------------1.00--------1.00----------------------------
.........................................................................................................................................................................................................................................GCTCCCTGCCCCTCTGAGA 192.000.00----------------------------------1.00--------------------------------1.00----
..................................................................................................................................................................................CCCACCCCTCCTCTCCCTCGAG.................................................. 221.000.00--------------------------1.00---------------------------------------------
....................................................................................................................................................................................CACCCCTCCTCTCCCTCCCGG................................................. 211.000.00------------------------------------------------------1.00-----------------
.................................TGTGACCGCCTCGGGCTAG...................................................................................................................................................................................................... 191.000.00------------------------------------------1.00-----------------------------
.......................................CGCCTCGGGGCTCCCCG.................................................................................................................................................................................................. 171.000.00----------------------------------------------1.00-------------------------
...........................................................................................................AGTGGTCGGGCAGGGAGGT............................................................................................................................ 191.000.00---------------------------------------------------------1.00--------------
...............................GCTGTGACCGCCTCGGCTAG....................................................................................................................................................................................................... 201.000.00--------------------------------------------------------1.00---------------
..........................................................................................................TCCCTGCCCGACCACTT............................................................................................................................... 1720.500.50------------------------------------------0.50-----------------------------