uc002ybz.1_intron_10_0_chr20_60749701

CGCAGACAGCGCCGTCTGCCCAGCAGCAGCGGCCCTACGGCTATGAACAGGCAAGCTTTCTGGATGTTTCCAGATGTGCCCATCCGCCGCGCCTGTCGAGACATAATGAAGATTTCTCTTATGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTGTAAGGTTTTGCAGAATTGCCTCTGTGTATACGCTCACCTCAGTCATCCAGCTGGC
.....................................................................................................................((((((((((.((((..(((((..((((((....((((...))))......))))))..)))))..)))))).))).)))))...................................................
....................................................................................................................117................................................................................200................................................

Size

Perfect hit

Total Norm

Perfect Norm

DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)

DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)

DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)

SRR037940(GSM510478)
293cand5_rep2. (cell line)

DRR001484(DRX001038)
"Hela long nuclear cell fraction, control". (hela)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR037939(GSM510477)
293cand5_rep1. (cell line)

GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)

SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)

GSM359174(GSM359174)
hela_5_1. (hela)

SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR207116(GSM721078)
Nuclear RNA. (cell line)

GSM359178(GSM359178)
hela_nucl_t. (hela)

SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)

GSM359173(GSM359173)
hela_10_1. (hela)

GSM359179(GSM359179)
hela_phil_rd2. (hela)

SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)

SRR189783

GSM359175(GSM359175)
hela_5_pct. (hela)

SRR553576(SRX182782)
source: Testis. (testes)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)

SRR189787

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR189782

SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)

SRR029128(GSM416757)
H520. (cell line)

GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)

SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)

SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR029126(GSM416755)
143B. (cell line)

SRR038860(GSM458543)
MM426. (cell line)

SRR189786

SRR038863(GSM458546)
MM603. (cell line)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR191412(GSM715522)
24genomic small RNA (size selected RNA from t. (breast)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)

SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)

SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)

GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR553575(SRX182781)
source: Kidney. (Kidney)

SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)

GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040028(GSM532913)
G026N. (cervix)

GSM359187(GSM359187)
HepG2_2pM_1. (cell line)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR037943(GSM510481)
293DcrTN. (cell line)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR033724(GSM497069)
L428 cell line (L428). (B cell)

SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)

TAX577740(Rovira)
total RNA. (breast)

SRR037937(GSM510475)
293cand2. (cell line)

SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)

GSM359193(GSM359193)
HepG2_3pM_7. (cell line)

SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR038861(GSM458544)
MM466. (cell line)

GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR038859(GSM458542)
MM386. (cell line)

SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR038857(GSM458540)
D20. (cell line)

GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

GSM359181(GSM359181)
hela_phil_smrna_nuc. (hela)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)

GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)

SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)

TAX577745(Rovira)
total RNA. (breast)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

GSM359177(GSM359177)
hela_nucl_a. (hela)

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTG.......................................................

333.00

163.00

104.00

45.00

10.00

11.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTGT......................................................

41.00

15.00

3.00

6.00

2.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAA.......................................................................................................

35.00

10.00

9.00

4.00

2.00

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCTGT......................................................

32.00

3.00

1.00

12.00

9.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTG..........................................................................................................

23.00

3.00

2.00

4.00

1.00

2.00

1.00

2.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGA.........................................................................................................

19.00

23.00

9.00

10.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGC..........................................................

8.00

5.00

1.00

2.00

..............................................................................................................................ATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTG.......................................................

8.00

1.00

7.00

........................................................................................................................ATGGCCATGAGGAATAATGAGCTGGA........................................................................................................

7.00

1.00

2.00

4.00

...............................................................................................................................................................................ACGTTAAGTCTCTGAGCCTGT......................................................

7.00

5.00

2.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGC..........................................................

7.00

5.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAAC......................................................................................................

7.00

1.00

4.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCT...........................................................................................................

5.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGG.........................................................................................................

4.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGC............................................................................................................

4.00

1.00

2.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAG...........................................................

4.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTGA......................................................

4.00

2.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTG................................................................................................

4.00

.........................................................................................................................TGGCCATGAGGAATAATGAG.............................................................................................................

3.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACT.................................................................................................

3.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCTG.......................................................

3.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATG...............................................................................................................

3.00

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTGTAT....................................................

2.00

0.00

2.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGATC.......................................................................................................

2.00

23.00

2.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCCGT......................................................

2.00

1.00

........................................................................................................................ATGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTG.......................................................

2.00

...........................................................................................................................................AGCTGGAACTAACTGGCTTC...........................................................................................

2.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGA........................................................................................................

2.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTGTAAGGA.................................................

2.00

0.00

2.00

........................................................................................................................................................................TTCCAGAACGTTAAGTCTCTGAGC..........................................................

2.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTGTT.....................................................

2.00

41.00

1.00

................................CCCTACGGCTATGAACAG........................................................................................................................................................................................................

2.00

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCTGA......................................................

2.00

3.00

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTG.......................................................

2.00

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCCGT......................................................

1.00

0.00

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCTGTCAA...................................................

1.00

32.00

1.00

............................................................................................................................................................................AGAACGTTAAGTCTCTGAGCCTGTAA....................................................

1.00

...AGACAGCGCCGTCTGCCCA....................................................................................................................................................................................................................................

1.00

..........................................................................................................................GGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTG.......................................................

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTA.......................................................

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCTGTAG....................................................

1.00

0.00

1.00

................................................................................................................................................................................CGTTAAGTCTCTGAGC..........................................................

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGC..........................................................

1.00

.........................................................................................................................TGGCCATGAGGAATAATGA..............................................................................................................

1.00

...........................................................................................................................GCCATGAGGAATAATGAGCTGGAACT.....................................................................................................

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTT..........................................................................................................

1.00

5.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGT.........................................................................................................

1.00

23.00

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTTT......................................................

1.00

0.00

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCC.........................................................

1.00

....................................................................................................................................................................................AAGTCTCTGAGCCTGTAAGGTTTT..............................................

1.00

.......................................................................................................................................................................CTTCCAGAACGTTAAGTCTCTGAGCCTGT......................................................

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGTGC..........................................................

1.00

0.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCT........................................................

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTGCC.....................................................

1.00

2.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTAG.........................................................................................................

1.00

5.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACT.....................................................................................................

1.00

.................................CCTACGGCTATGAACAGGCAAGCAA................................................................................................................................................................................................

1.00

0.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTGTAAGGTTTTGCAGAATTG.....................................

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTA..........................................................................................................

1.00

5.00

1.00

..........................CAGCGGCCCTACGGCTATGAACAGGGC.....................................................................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................CTCTGAGCCTGTAAGGTT................................................

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTCCAGGGTTCCTTCCAGAACGTTAAGTCTCTGAGCCTGTAAGGTA................................................

1.00

0.00

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGAACTAACTGGCTTC...........................................................................................

1.00

..............................................................................................................................................................................AACGTTAAGTCTCTGAGCCTGC......................................................

1.00

2.00

1.00

............................................................................................................................................................................AGAACGTTAAGTCTCTGAGCCTG.......................................................

1.00

.........................................................................................................................TGGCCATGAGGAATAATGAGCTGGT........................................................................................................

1.00

4.00

1.00

...................CCAGCAGCAGCGGCCCCGGC...................................................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................................TATGGCCATGAGGAATAATGAGC............................................................................................................

1.00

.......AGCGCCGTCTGCCCAGCAGCA..............................................................................................................................................................................................................................

1.00

.............................................................................................................................................................................GAACGTTAAGTCTCTGAGCCTGTT.....................................................

1.00

32.00

1.00

................................................................................................................................GAGGAATAATGAGCTG..........................................................................................................

0.33