ID: uc002yaz.2_intron_9_0_chr20_58445039_r.3p
GENE: (34)
chr20:58444989-58445238-


(1)
B-CELL
(2)
BREAST
(4)
CELL-LINE
(2)
CERVIX
(1)
HEART
(1)
OTHER
(4)
SKIN

Sense strand
CAGGTTTTGGTCATCAAAGTAATAATCCACTTGCCTAAGGATTTTTTATTTTTAGTTATGAATTGGAATTGAATTTTTGCAGTGAATTAGTAGTTTTGCAGTTTTGCTTTAATGTTTCTTATGTTCAACTCTTTTTGAAGTGGGGGGCTTTGAACAATTTTGTAACTTCTTATTGGGTTTTTGTATGTCTTCATTCATAGCCCAGACATACTCCAACTAAGAGTAATACTATTGTAAATAGAAAAAAAAT
.................................................................................................((((..(((.(((((.((..(((((.(((((......))))))))))..)).))))))))..)))).......................................................................................
...........................................................................76.....................................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR029128(GSM416757)
H520. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR189784SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR040043(GSM532928)
G428T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
................................................................................AGTGAATTAGTAGTTGCT........................................................................................................................................................1850.000.0046.00-4.00---------------
............................................................................................................................................TGGGGGGCTTTGAACTCTG...........................................................................................193.000.00------2.00------1.00----
.........................................................................................................................................AAGTGGGGGGCTTTGTACC..............................................................................................192.000.00---2.00--------------
...........................................................................................AGTTTTGCAGTTTTGCATCC...........................................................................................................................................202.000.00---------1.00--1.00-----
................................................................................AGTGAATTAGTAGTTGATC.......................................................................................................................................................192.000.00----2.00-------------
................................................................................AGTGAATTAGTAGTTGCTG.......................................................................................................................................................191.000.001.00-----------------
...........................................................................................AGTTTTGCAGTTTTGCGTCC...........................................................................................................................................201.000.00---------------1.00--
....................................AAGGATTTTTTATTTTACT...................................................................................................................................................................................................191.000.00-----------1.00------
..................................................................................TGAATTAGTAGTTTTGACAG....................................................................................................................................................201.000.00----------1.00-------
......................................................................................................................................................................................................................................ATTGTAAATAGAAAAAAAAT2020.500.50----------------0.50-

Antisense strand
CAGGTTTTGGTCATCAAAGTAATAATCCACTTGCCTAAGGATTTTTTATTTTTAGTTATGAATTGGAATTGAATTTTTGCAGTGAATTAGTAGTTTTGCAGTTTTGCTTTAATGTTTCTTATGTTCAACTCTTTTTGAAGTGGGGGGCTTTGAACAATTTTGTAACTTCTTATTGGGTTTTTGTATGTCTTCATTCATAGCCCAGACATACTCCAACTAAGAGTAATACTATTGTAAATAGAAAAAAAAT
.................................................................................................((((..(((.(((((.((..(((((.(((((......))))))))))..)).))))))))..)))).......................................................................................
...........................................................................76.....................................................................................163.....................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR029128(GSM416757)
H520. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR189784SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR189782SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR040043(GSM532928)
G428T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
.......................................................................................................................................................................................................................ATAGTATTACTCTTAGT.................. 1713.003.00-3.00----------------
.......................................................................................................................................................................................................................ACTAAGAGTAATACTATTCCC.............. 212.000.00-2.00----------------
.......................................................................................................................................................................................................................ACTAAGAGTAATACTATCC................ 192.000.00-2.00----------------
..................................................................................................................................................................................................................CTCCAACTAAGAGTAAGGT..................... 192.000.00-------2.00----------
.......................................................................................................................................................................................................................ACTAAGAGTAATACTATC................. 182.000.00-2.00----------------
.............................................................................................................................................................................................TTCATTCATAGCCCAATC........................................... 182.000.00-----2.00------------
.........................................................................................................................................................................................................................................GTAAATAGAAAAAAAATTCCA 211.000.00--------1.00---------
........................................................................................................................................................................................................................CTAAGAGTAATACTATTGCC.............. 201.000.00-1.00----------------
.........................................................................................................................TGTTCAACTCTTTTTGGA............................................................................................................... 181.000.00--------------1.00---
.........................................................................................................................................................................................................................TAAGAGTAATACTATTCT............... 181.000.00-1.00----------------
.......................................................................................................................................................................................................................ACTAAGAGTAATACTATTGC............... 201.000.00-1.00----------------
........................................................................................................................................................................................................................CTAAGAGTAATACTATTG................ 181.000.00-1.00----------------
.......................................................................................................................................................................................................................ACTAAGAGTAATACTATTCC............... 201.000.00-1.00----------------
........................................................................................................................................................................................................................CTAAGAGTAATACTATGCA............... 190.200.00-0.20----------------
........................................................................................................................................................................................................................ATAGTATTACTCTTAG.................. 1650.200.20-0.20----------------
........................................................................................................................................................................................................................CTAAGAGTAATACTATGCCC.............. 200.200.00-0.20----------------
...........................................................................................................................................................................................................................CAATAGTATTACTCT................ 1550.200.20-----------------0.20